RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 ASTLQ6HA08 431 aaPredicted RBP10.91□□□□□ -0.66
CSTF1-205ENST00000490539 MS4A3Q96HJ5 214 aa10.91□□□□□ -0.66
CSTF1-205ENST00000490539 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
CSTF1-205ENST00000490539 POTEGQ6S5H5 508 aa10.9□□□□□ -0.66
CSTF1-205ENST00000490539 SLC39A7Q92504 469 aa10.9□□□□□ -0.66
CSTF1-205ENST00000490539 C7P10643 843 aa10.89□□□□□ -0.67
CSTF1-205ENST00000490539 ATMINO43313 823 aaPredicted RBP10.88□□□□□ -0.67
CSTF1-205ENST00000490539 MAMSTRQ6ZN01 415 aa10.85□□□□□ -0.67
CSTF1-205ENST00000490539 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
CSTF1-205ENST00000490539 TSPYL2Q9H2G4 693 aaPredicted RBP10.82□□□□□ -0.68
CSTF1-205ENST00000490539 NISCHQ9Y2I1 1504 aa10.8□□□□□ -0.68
CSTF1-205ENST00000490539 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
CSTF1-205ENST00000490539 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
CSTF1-205ENST00000490539 CCDC61Q9Y6R9 512 aa10.78□□□□□ -0.68
CSTF1-205ENST00000490539 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
CSTF1-205ENST00000490539 SCUBE2Q9NQ36 999 aa10.77□□□□□ -0.69
CSTF1-205ENST00000490539 MIER1Q8N108 512 aa10.76□□□□□ -0.69
CSTF1-205ENST00000490539 PLCD3Q8N3E9 789 aa10.75□□□□□ -0.69
CSTF1-205ENST00000490539 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
CSTF1-205ENST00000490539 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
CSTF1-205ENST00000490539 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
CSTF1-205ENST00000490539 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
CSTF1-205ENST00000490539 VASPP50552 380 aaPredicted RBP10.68□□□□□ -0.7
CSTF1-205ENST00000490539 TIE1P35590 1138 aa10.67□□□□□ -0.7
CSTF1-205ENST00000490539 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
CSTF1-205ENST00000490539 MAP3K13O43283 966 aa10.65□□□□□ -0.7
CSTF1-205ENST00000490539 TRPC6Q9Y210 931 aa10.65□□□□□ -0.7
CSTF1-205ENST00000490539 POTEFA5A3E0 1075 aa10.64□□□□□ -0.71
CSTF1-205ENST00000490539 RASEFQ8IZ41 740 aa10.62□□□□□ -0.71
CSTF1-205ENST00000490539 SEC24BO95487 1268 aa10.61□□□□□ -0.71
CSTF1-205ENST00000490539 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
CSTF1-205ENST00000490539 TTLL13PA6NNM8 815 aa10.58□□□□□ -0.72
CSTF1-205ENST00000490539 COLQQ9Y215 455 aaPredicted RBP10.56□□□□□ -0.72
CSTF1-205ENST00000490539 IER5LQ5T953 404 aa10.54□□□□□ -0.72
CSTF1-205ENST00000490539 SGIP1Q9BQI5 828 aa10.54□□□□□ -0.72
CSTF1-205ENST00000490539 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
CSTF1-205ENST00000490539 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
CSTF1-205ENST00000490539 IFNLR1Q8IU57 520 aaPredicted RBP10.48□□□□□ -0.73
CSTF1-205ENST00000490539 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
CSTF1-205ENST00000490539 SPOCK2Q92563 424 aa10.46□□□□□ -0.73
CSTF1-205ENST00000490539 SLAIN1Q8ND83 568 aa10.45□□□□□ -0.74
CSTF1-205ENST00000490539 NUBP1P53384 320 aa10.43□□□□□ -0.74
CSTF1-205ENST00000490539 IFNL1Q8IU54 200 aa10.43□□□□□ -0.74
CSTF1-205ENST00000490539 TMEM106CQ9BVX2 250 aa10.43□□□□□ -0.74
CSTF1-205ENST00000490539 FAM212AQ96EL1 285 aa10.42□□□□□ -0.74
CSTF1-205ENST00000490539 PLCG2P16885 1265 aa10.41□□□□□ -0.74
CSTF1-205ENST00000490539 ST18O60284 1047 aa10.4□□□□□ -0.74
CSTF1-205ENST00000490539 DCAF8Q5TAQ9 597 aa10.38□□□□□ -0.75
CSTF1-205ENST00000490539 GSE1Q14687 1217 aa10.37□□□□□ -0.75
CSTF1-205ENST00000490539 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
CSTF1-205ENST00000490539 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
CSTF1-205ENST00000490539 CIZ1Q9ULV3 898 aaPredicted RBP10.33□□□□□ -0.76
CSTF1-205ENST00000490539 OCEL1Q9H607 264 aa10.31□□□□□ -0.76
CSTF1-205ENST00000490539 SNPHO15079 494 aa10.29□□□□□ -0.76
CSTF1-205ENST00000490539 TMEM121BQ9BXQ6 578 aaPredicted RBP10.29□□□□□ -0.76
CSTF1-205ENST00000490539 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.27□□□□□ -0.77
CSTF1-205ENST00000490539 TRIM41Q8WV44 630 aa10.26□□□□□ -0.77
CSTF1-205ENST00000490539 PYGBP11216 843 aa10.25□□□□□ -0.77
CSTF1-205ENST00000490539 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
CSTF1-205ENST00000490539 SPNS2Q8IVW8 549 aa10.22□□□□□ -0.77
CSTF1-205ENST00000490539 PCDHB8Q9UN66 801 aa10.22□□□□□ -0.77
CSTF1-205ENST00000490539 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
CSTF1-205ENST00000490539 CHRM1P11229 460 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-205ENST00000490539 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
CSTF1-205ENST00000490539 GOLGA2Q08379 1002 aa10.15□□□□□ -0.78
CSTF1-205ENST00000490539 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
CSTF1-205ENST00000490539 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
CSTF1-205ENST00000490539 ZNF467Q7Z7K2 595 aaPredicted RBP10.13□□□□□ -0.79
CSTF1-205ENST00000490539 PDCD7Q8N8D1 485 aaKnown RBP10.13□□□□□ -0.79
CSTF1-205ENST00000490539 L3MBTL3Q96JM7 780 aaPredicted RBP10.13□□□□□ -0.79
CSTF1-205ENST00000490539 EMP3P54852 163 aa10.12□□□□□ -0.79
CSTF1-205ENST00000490539 AMER1Q5JTC6 1135 aaPredicted RBP10.12□□□□□ -0.79
CSTF1-205ENST00000490539 TAOK2Q9UL54 1235 aa10.1□□□□□ -0.79
CSTF1-205ENST00000490539 PKD2Q13563 968 aa10.08□□□□□ -0.8
CSTF1-205ENST00000490539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.8
CSTF1-205ENST00000490539 HS3ST6Q96QI5 342 aa10.04□□□□□ -0.8
CSTF1-205ENST00000490539 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
CSTF1-205ENST00000490539 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
CSTF1-205ENST00000490539 PSEN1P49768 467 aa10.03□□□□□ -0.8
CSTF1-205ENST00000490539 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
CSTF1-205ENST00000490539 KRTAP3-3Q9BYR6 98 aa10.01□□□□□ -0.81
CSTF1-205ENST00000490539 KRTAP3-2Q9BYR7 98 aa10.01□□□□□ -0.81
CSTF1-205ENST00000490539 POTEB3A0JP26 581 aa10□□□□□ -0.81
CSTF1-205ENST00000490539 POTEBQ6S5H4 581 aa10□□□□□ -0.81
CSTF1-205ENST00000490539 ABCC9O60706 1549 aa9.98□□□□□ -0.81
CSTF1-205ENST00000490539 VGFO15240 615 aaPredicted RBP9.98□□□□□ -0.81
CSTF1-205ENST00000490539 G3V3G9 751 aa9.97□□□□□ -0.81
CSTF1-205ENST00000490539 ILDR1Q86SU0 546 aaPredicted RBP9.96□□□□□ -0.82
CSTF1-205ENST00000490539 RTN4Q9NQC3 1192 aaKnown RBP9.96□□□□□ -0.82
CSTF1-205ENST00000490539 RGL2O15211 777 aa9.95□□□□□ -0.82
CSTF1-205ENST00000490539 DPY19L2Q6NUT2 758 aa9.94□□□□□ -0.82
CSTF1-205ENST00000490539 DCAF8L2P0C7V8 631 aa9.93□□□□□ -0.82
CSTF1-205ENST00000490539 RNF25Q96BH1 459 aaPredicted RBP9.93□□□□□ -0.82
CSTF1-205ENST00000490539 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
CSTF1-205ENST00000490539 CABP2Q9NPB3 220 aa9.91□□□□□ -0.82
CSTF1-205ENST00000490539 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
CSTF1-205ENST00000490539 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
CSTF1-205ENST00000490539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.88□□□□□ -0.83
CSTF1-205ENST00000490539 STK25O00506 426 aa9.88□□□□□ -0.83
CSTF1-205ENST00000490539 ZFP91Q96JP5 570 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms