RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
TRAPPC12-221ENST00000489032 FAM212AQ96EL1 285 aa16.15■□□□□ 0.18
TRAPPC12-221ENST00000489032 PRKAR2AP13861 404 aaKnown RBP16.13■□□□□ 0.17
TRAPPC12-221ENST00000489032 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
TRAPPC12-221ENST00000489032 FXR2P51116 673 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRAPPC12-221ENST00000489032 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
TRAPPC12-221ENST00000489032 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC12-221ENST00000489032 RASEFQ8IZ41 740 aa16.02■□□□□ 0.16
TRAPPC12-221ENST00000489032 RGL2O15211 777 aa16■□□□□ 0.15
TRAPPC12-221ENST00000489032 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
TRAPPC12-221ENST00000489032 PIP4P2Q8N4L2 257 aa15.99■□□□□ 0.15
TRAPPC12-221ENST00000489032 SLC24A1O60721 1099 aa15.97■□□□□ 0.15
TRAPPC12-221ENST00000489032 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
TRAPPC12-221ENST00000489032 TSPYL2Q9H2G4 693 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC12-221ENST00000489032 TAOK2Q9UL54 1235 aa15.92■□□□□ 0.14
TRAPPC12-221ENST00000489032 PAK3O75914 559 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC12-221ENST00000489032 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
TRAPPC12-221ENST00000489032 PYGBP11216 843 aa15.86■□□□□ 0.13
TRAPPC12-221ENST00000489032 CHRM1P11229 460 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC12-221ENST00000489032 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.84■□□□□ 0.13
TRAPPC12-221ENST00000489032 RIOK3O14730 519 aaKnown RBP15.83■□□□□ 0.12
TRAPPC12-221ENST00000489032 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
TRAPPC12-221ENST00000489032 BBXQ8WY36 941 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC12-221ENST00000489032 RNF25Q96BH1 459 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC12-221ENST00000489032 PLCB2Q00722 1185 aa15.76■□□□□ 0.11
TRAPPC12-221ENST00000489032 VGFO15240 615 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC12-221ENST00000489032 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.1
TRAPPC12-221ENST00000489032 ZNF467Q7Z7K2 595 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC12-221ENST00000489032 CCDC61Q9Y6R9 512 aa15.7■□□□□ 0.1
TRAPPC12-221ENST00000489032 CD44P16070 742 aaKnown RBP15.69■□□□□ 0.1
TRAPPC12-221ENST00000489032 HS6ST3Q8IZP7 471 aa15.68■□□□□ 0.1
TRAPPC12-221ENST00000489032 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
TRAPPC12-221ENST00000489032 STK25O00506 426 aa15.66■□□□□ 0.1
TRAPPC12-221ENST00000489032 PAXIP1Q6ZW49 1069 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC12-221ENST00000489032 CFAP44Q96MT7 982 aa15.64■□□□□ 0.09
TRAPPC12-221ENST00000489032 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
TRAPPC12-221ENST00000489032 CUX2O14529 1486 aa15.63■□□□□ 0.09
TRAPPC12-221ENST00000489032 HAP1P54257 671 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC12-221ENST00000489032 SPRYD3Q8NCJ5 442 aa15.6■□□□□ 0.09
TRAPPC12-221ENST00000489032 PCDHB13Q9Y5F0 798 aa15.6■□□□□ 0.09
TRAPPC12-221ENST00000489032 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
TRAPPC12-221ENST00000489032 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-221ENST00000489032 ZFP91Q96JP5 570 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-221ENST00000489032 SGIP1Q9BQI5 828 aa15.59■□□□□ 0.09
TRAPPC12-221ENST00000489032 STK24Q9Y6E0 443 aa15.59■□□□□ 0.09
TRAPPC12-221ENST00000489032 ZNF579Q8NAF0 562 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-221ENST00000489032 PCDHB8Q9UN66 801 aa15.57■□□□□ 0.08
TRAPPC12-221ENST00000489032 BCL11BQ9C0K0 894 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC12-221ENST00000489032 PDAP1Q13442 181 aaKnown RBP15.55■□□□□ 0.08
TRAPPC12-221ENST00000489032 KIF12Q96FN5 646 aa15.54■□□□□ 0.08
TRAPPC12-221ENST00000489032 MAP3K13O43283 966 aa15.53■□□□□ 0.08
TRAPPC12-221ENST00000489032 C19orf67A6NJJ6 358 aa15.52■□□□□ 0.08
TRAPPC12-221ENST00000489032 HAX1O00165 279 aa15.49■□□□□ 0.07
TRAPPC12-221ENST00000489032 PHF12Q96QT6 1004 aa15.49■□□□□ 0.07
TRAPPC12-221ENST00000489032 PSEN1P49768 467 aa15.48■□□□□ 0.07
TRAPPC12-221ENST00000489032 IFNL1Q8IU54 200 aa15.48■□□□□ 0.07
TRAPPC12-221ENST00000489032 ERCC6Q03468 1493 aa15.46■□□□□ 0.06
TRAPPC12-221ENST00000489032 RYDENQ9NUL5 291 aaKnown RBP15.43■□□□□ 0.06
TRAPPC12-221ENST00000489032 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC12-221ENST00000489032 VSIG10Q8N0Z9 540 aa15.34■□□□□ 0.05
TRAPPC12-221ENST00000489032 MS4A3Q96HJ5 214 aa15.32■□□□□ 0.04
TRAPPC12-221ENST00000489032 GTPBP6O43824 516 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC12-221ENST00000489032 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
TRAPPC12-221ENST00000489032 CLCN6P51797 869 aa15.3■□□□□ 0.04
TRAPPC12-221ENST00000489032 CABP2Q9NPB3 220 aa15.3■□□□□ 0.04
TRAPPC12-221ENST00000489032 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.04
TRAPPC12-221ENST00000489032 TSHZ2Q9NRE2 1034 aa15.27■□□□□ 0.04
TRAPPC12-221ENST00000489032 POTEHQ6S545 545 aa15.23■□□□□ 0.03
TRAPPC12-221ENST00000489032 EFCAB3Q8N7B9 438 aa15.23■□□□□ 0.03
TRAPPC12-221ENST00000489032 SOX12O15370 315 aa15.21■□□□□ 0.03
TRAPPC12-221ENST00000489032 TIE1P35590 1138 aa15.2■□□□□ 0.02
TRAPPC12-221ENST00000489032 EVX2Q03828 476 aa15.2■□□□□ 0.02
TRAPPC12-221ENST00000489032 NLRP6P59044 892 aa15.19■□□□□ 0.02
TRAPPC12-221ENST00000489032 MKRN3Q13064 507 aaKnown RBP15.18■□□□□ 0.02
TRAPPC12-221ENST00000489032 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
TRAPPC12-221ENST00000489032 GALR2O43603 387 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC12-221ENST00000489032 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
TRAPPC12-221ENST00000489032 MFRPQ9BY79 579 aa15.15■□□□□ 0.02
TRAPPC12-221ENST00000489032 NESP48681 1621 aa15.11■□□□□ 0.01
TRAPPC12-221ENST00000489032 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
TRAPPC12-221ENST00000489032 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
TRAPPC12-221ENST00000489032 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
TRAPPC12-221ENST00000489032 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC12-221ENST00000489032 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
TRAPPC12-221ENST00000489032 TRIM35Q9UPQ4 493 aa15.05■□□□□ -0
TRAPPC12-221ENST00000489032 FBXO22Q8NEZ5 403 aa15.04■□□□□ -0
TRAPPC12-221ENST00000489032 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
TRAPPC12-221ENST00000489032 GABBR2O75899 941 aa15.02■□□□□ -0
TRAPPC12-221ENST00000489032 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
TRAPPC12-221ENST00000489032 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15□□□□□ -0.01
TRAPPC12-221ENST00000489032 DCBLD2Q96PD2 775 aa14.99□□□□□ -0.01
TRAPPC12-221ENST00000489032 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
TRAPPC12-221ENST00000489032 PPP1R37O75864 691 aa14.96□□□□□ -0.01
TRAPPC12-221ENST00000489032 ATN1P54259 1190 aaPredicted RBP14.96□□□□□ -0.01
TRAPPC12-221ENST00000489032 WDR70Q9NW82 654 aa14.96□□□□□ -0.01
TRAPPC12-221ENST00000489032 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC12-221ENST00000489032 BCANQ96GW7 911 aa14.95□□□□□ -0.02
TRAPPC12-221ENST00000489032 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
TRAPPC12-221ENST00000489032 ASTLQ6HA08 431 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC12-221ENST00000489032 MS4A4AQ96JQ5 239 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms