RNA–Protein interactions for RNA: ENST00000488585.1

APLF-205, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 2

Gene APLF, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-205ENST00000488585 GALR2O43603 387 aaPredicted RBP9.37□□□□□ -0.91
APLF-205ENST00000488585 RB1CC1Q8TDY2 1594 aa9.34□□□□□ -0.91
APLF-205ENST00000488585 NUBP1P53384 320 aa9.34□□□□□ -0.91
APLF-205ENST00000488585 DCBLD2Q96PD2 775 aa9.33□□□□□ -0.92
APLF-205ENST00000488585 RASEFQ8IZ41 740 aa9.32□□□□□ -0.92
APLF-205ENST00000488585 TSPYL2Q9H2G4 693 aaPredicted RBP9.32□□□□□ -0.92
APLF-205ENST00000488585 IFNLR1Q8IU57 520 aaPredicted RBP9.3□□□□□ -0.92
APLF-205ENST00000488585 LHX8Q68G74 356 aa9.29□□□□□ -0.92
APLF-205ENST00000488585 CCDC61Q9Y6R9 512 aa9.28□□□□□ -0.92
APLF-205ENST00000488585 KLHL34Q8N239 644 aa9.27□□□□□ -0.93
APLF-205ENST00000488585 NACADO15069 1562 aa9.26□□□□□ -0.93
APLF-205ENST00000488585 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
APLF-205ENST00000488585 UNC13AQ9UPW8 1703 aa9.23□□□□□ -0.93
APLF-205ENST00000488585 FAM212AQ96EL1 285 aa9.22□□□□□ -0.93
APLF-205ENST00000488585 SPOCK2Q92563 424 aa9.21□□□□□ -0.94
APLF-205ENST00000488585 PELP1Q8IZL8 1130 aaKnown RBP9.2□□□□□ -0.94
APLF-205ENST00000488585 KIF12Q96FN5 646 aa9.2□□□□□ -0.94
APLF-205ENST00000488585 DCAF8Q5TAQ9 597 aa9.17□□□□□ -0.94
APLF-205ENST00000488585 MAP3K13O43283 966 aa9.16□□□□□ -0.94
APLF-205ENST00000488585 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
APLF-205ENST00000488585 GSE1Q14687 1217 aa9.15□□□□□ -0.94
APLF-205ENST00000488585 ASTLQ6HA08 431 aaPredicted RBP9.15□□□□□ -0.94
APLF-205ENST00000488585 SGIP1Q9BQI5 828 aa9.14□□□□□ -0.95
APLF-205ENST00000488585 TRPC6Q9Y210 931 aa9.14□□□□□ -0.95
APLF-205ENST00000488585 POTEB2H3BUK9 544 aa9.13□□□□□ -0.95
APLF-205ENST00000488585 MYO15BQ96JP2 1530 aa9.13□□□□□ -0.95
APLF-205ENST00000488585 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
APLF-205ENST00000488585 ATN1P54259 1190 aaPredicted RBP9.1□□□□□ -0.95
APLF-205ENST00000488585 BMP2KQ9NSY1 1161 aaPredicted RBP9.09□□□□□ -0.95
APLF-205ENST00000488585 PYGBP11216 843 aa9.08□□□□□ -0.96
APLF-205ENST00000488585 METRNQ9UJH8 293 aa9.08□□□□□ -0.96
APLF-205ENST00000488585 PCDHB13Q9Y5F0 798 aa9.08□□□□□ -0.96
APLF-205ENST00000488585 SLC39A7Q92504 469 aa9.06□□□□□ -0.96
APLF-205ENST00000488585 CIZ1Q9ULV3 898 aaPredicted RBP9.06□□□□□ -0.96
APLF-205ENST00000488585 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
APLF-205ENST00000488585 OTUD5Q96G74 571 aa9.05□□□□□ -0.96
APLF-205ENST00000488585 BICRAQ9NZM4 1560 aa9.04□□□□□ -0.96
APLF-205ENST00000488585 C7P10643 843 aa9.04□□□□□ -0.96
APLF-205ENST00000488585 TIE1P35590 1138 aa9.04□□□□□ -0.96
APLF-205ENST00000488585 DCAF8L2P0C7V8 631 aa9.03□□□□□ -0.96
APLF-205ENST00000488585 TRIM41Q8WV44 630 aa9.03□□□□□ -0.96
APLF-205ENST00000488585 TTLL13PA6NNM8 815 aa9.02□□□□□ -0.97
APLF-205ENST00000488585 POTEJP0CG39 1038 aa9.02□□□□□ -0.97
APLF-205ENST00000488585 POTEFA5A3E0 1075 aa9□□□□□ -0.97
APLF-205ENST00000488585 ZNF467Q7Z7K2 595 aaPredicted RBP8.99□□□□□ -0.97
APLF-205ENST00000488585 PCDHB8Q9UN66 801 aa8.98□□□□□ -0.97
APLF-205ENST00000488585 SHROOM4Q9ULL8 1493 aa8.97□□□□□ -0.97
APLF-205ENST00000488585 DCAF1Q9Y4B6 1507 aa8.97□□□□□ -0.97
APLF-205ENST00000488585 TRIM35Q9UPQ4 493 aa8.96□□□□□ -0.98
APLF-205ENST00000488585 COLQQ9Y215 455 aaPredicted RBP8.95□□□□□ -0.98
APLF-205ENST00000488585 TMEM106CQ9BVX2 250 aa8.94□□□□□ -0.98
APLF-205ENST00000488585 ZCCHC6Q5VYS8 1495 aaKnown RBP8.94□□□□□ -0.98
APLF-205ENST00000488585 PKD2Q13563 968 aa8.92□□□□□ -0.98
APLF-205ENST00000488585 SEC24BO95487 1268 aa8.9□□□□□ -0.98
APLF-205ENST00000488585 RNF25Q96BH1 459 aaPredicted RBP8.9□□□□□ -0.98
APLF-205ENST00000488585 PSEN1P49768 467 aa8.89□□□□□ -0.99
APLF-205ENST00000488585 PDAP1Q13442 181 aaKnown RBP8.89□□□□□ -0.99
APLF-205ENST00000488585 IER5LQ5T953 404 aa8.89□□□□□ -0.99
APLF-205ENST00000488585 CC2D2AQ9P2K1 1620 aa8.87□□□□□ -0.99
APLF-205ENST00000488585 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
APLF-205ENST00000488585 MAMSTRQ6ZN01 415 aa8.87□□□□□ -0.99
APLF-205ENST00000488585 ECM2O94769 699 aaPredicted RBP8.86□□□□□ -0.99
APLF-205ENST00000488585 SCRIBQ14160 1630 aa8.86□□□□□ -0.99
APLF-205ENST00000488585 SCUBE2Q9NQ36 999 aa8.84□□□□□ -0.99
APLF-205ENST00000488585 EIF4G1Q04637 1599 aaKnown RBP8.83□□□□□ -1
APLF-205ENST00000488585 IRX5P78411 483 aaPredicted RBP8.83□□□□□ -1
APLF-205ENST00000488585 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
APLF-205ENST00000488585 CECR2Q9BXF3 1484 aa8.81□□□□□ -1
APLF-205ENST00000488585 RGL2O15211 777 aa8.8□□□□□ -1
APLF-205ENST00000488585 PLCG2P16885 1265 aa8.8□□□□□ -1
APLF-205ENST00000488585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.78□□□□□ -1
APLF-205ENST00000488585 ZFP91Q96JP5 570 aaPredicted RBP8.78□□□□□ -1
APLF-205ENST00000488585 TAOK2Q9UL54 1235 aa8.78□□□□□ -1
APLF-205ENST00000488585 ILDR1Q86SU0 546 aaPredicted RBP8.77□□□□□ -1.01
APLF-205ENST00000488585 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
APLF-205ENST00000488585 GOLGA2Q08379 1002 aa8.76□□□□□ -1.01
APLF-205ENST00000488585 MKRN3Q13064 507 aaKnown RBP8.76□□□□□ -1.01
APLF-205ENST00000488585 LCE2DQ5TA82 110 aaPredicted RBP8.76□□□□□ -1.01
APLF-205ENST00000488585 CABP2Q9NPB3 220 aa8.76□□□□□ -1.01
APLF-205ENST00000488585 POTEMA6NI47 508 aa8.75□□□□□ -1.01
APLF-205ENST00000488585 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
APLF-205ENST00000488585 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
APLF-205ENST00000488585 PDCD7Q8N8D1 485 aaKnown RBP8.72□□□□□ -1.01
APLF-205ENST00000488585 EFCAB3Q8N7B9 438 aa8.71□□□□□ -1.02
APLF-205ENST00000488585 SLAIN1Q8ND83 568 aa8.71□□□□□ -1.02
APLF-205ENST00000488585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.02
APLF-205ENST00000488585 BCL11BQ9C0K0 894 aaPredicted RBP8.7□□□□□ -1.02
APLF-205ENST00000488585 SUPT5HO00267 1087 aaKnown RBP8.69□□□□□ -1.02
APLF-205ENST00000488585 STK25O00506 426 aa8.68□□□□□ -1.02
APLF-205ENST00000488585 SOX12O15370 315 aa8.68□□□□□ -1.02
APLF-205ENST00000488585 STK24Q9Y6E0 443 aa8.67□□□□□ -1.02
APLF-205ENST00000488585 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
APLF-205ENST00000488585 DPY19L2Q6NUT2 758 aa8.64□□□□□ -1.03
APLF-205ENST00000488585 HS6ST3Q8IZP7 471 aa8.63□□□□□ -1.03
APLF-205ENST00000488585 L3MBTL3Q96JM7 780 aaPredicted RBP8.63□□□□□ -1.03
APLF-205ENST00000488585 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.63□□□□□ -1.03
APLF-205ENST00000488585 PLSCR2Q9NRY7 297 aa8.62□□□□□ -1.03
APLF-205ENST00000488585 PHF8Q9UPP1 1060 aa8.62□□□□□ -1.03
APLF-205ENST00000488585 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
APLF-205ENST00000488585 MS4A4AQ96JQ5 239 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms