RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 DNTTIP2Q5QJE6 756 aaKnown RBP16.32■□□□□ 0.2
ABCA2-218ENST00000487109 ZBTB7CA1YPR0 619 aa16.32■□□□□ 0.2
ABCA2-218ENST00000487109 PTMAP06454 111 aaKnown RBP16.32■□□□□ 0.2
ABCA2-218ENST00000487109 NACADO15069 1562 aa16.3■□□□□ 0.2
ABCA2-218ENST00000487109 ANP32EQ9BTT0 268 aa16.3■□□□□ 0.2
ABCA2-218ENST00000487109 MTUS2Q5JR59 1369 aa16.29■□□□□ 0.2
ABCA2-218ENST00000487109 RSF1Q96T23 1441 aaPredicted RBP16.27■□□□□ 0.2
ABCA2-218ENST00000487109 C14orf37Q86TY3 774 aa16.27■□□□□ 0.19
ABCA2-218ENST00000487109 PLEKHG5O94827 1062 aa16.26■□□□□ 0.19
ABCA2-218ENST00000487109 DDRGK1Q96HY6 314 aa16.26■□□□□ 0.19
ABCA2-218ENST00000487109 EEA1Q15075 1411 aa16.26■□□□□ 0.19
ABCA2-218ENST00000487109 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
ABCA2-218ENST00000487109 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
ABCA2-218ENST00000487109 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
ABCA2-218ENST00000487109 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
ABCA2-218ENST00000487109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.191e-6■□□□□ 9.5
ABCA2-218ENST00000487109 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
ABCA2-218ENST00000487109 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
ABCA2-218ENST00000487109 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
ABCA2-218ENST00000487109 NPHP1O15259 732 aa16.16■□□□□ 0.18
ABCA2-218ENST00000487109 TAOK2Q9UL54 1235 aa16.14■□□□□ 0.17
ABCA2-218ENST00000487109 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
ABCA2-218ENST00000487109 PLEKHD1A6NEE1 506 aa16.13■□□□□ 0.17
ABCA2-218ENST00000487109 BAZ1BQ9UIG0 1483 aaKnown RBP16.13■□□□□ 0.17
ABCA2-218ENST00000487109 CLIP1P30622 1438 aa16.12■□□□□ 0.17
ABCA2-218ENST00000487109 PPP1R15AO75807 674 aaPredicted RBP16.11■□□□□ 0.17
ABCA2-218ENST00000487109 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
ABCA2-218ENST00000487109 CLSTN1O94985 981 aa16.11■□□□□ 0.17
ABCA2-218ENST00000487109 GOLGA3Q08378 1498 aa16.11■□□□□ 0.17
ABCA2-218ENST00000487109 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
ABCA2-218ENST00000487109 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
ABCA2-218ENST00000487109 CHIC2Q9UKJ5 165 aa16.1■□□□□ 0.17
ABCA2-218ENST00000487109 NAP1L5Q96NT1 182 aaPredicted RBP16.09■□□□□ 0.17
ABCA2-218ENST00000487109 NRDCO43847 1150 aa16.08■□□□□ 0.16
ABCA2-218ENST00000487109 IRX6P78412 446 aaPredicted RBP16.08■□□□□ 0.16
ABCA2-218ENST00000487109 FTSJ3Q8IY81 847 aaKnown RBP16.06■□□□□ 0.16
ABCA2-218ENST00000487109 KIF27Q86VH2 1401 aa16.06■□□□□ 0.16
ABCA2-218ENST00000487109 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
ABCA2-218ENST00000487109 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
ABCA2-218ENST00000487109 FGD1P98174 961 aa16.04■□□□□ 0.16
ABCA2-218ENST00000487109 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
ABCA2-218ENST00000487109 ERICH6BQ5W0A0 696 aa16.03■□□□□ 0.16
ABCA2-218ENST00000487109 EIF4G2P78344 907 aaKnown RBP eCLIP16.02■□□□□ 0.16
ABCA2-218ENST00000487109 NAP1L2Q9ULW6 460 aaPredicted RBP16.02■□□□□ 0.16
ABCA2-218ENST00000487109 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
ABCA2-218ENST00000487109 CFAP53Q96M91 514 aa16■□□□□ 0.15
ABCA2-218ENST00000487109 L1TD1Q5T7N2 865 aaKnown RBP15.99■□□□□ 0.15
ABCA2-218ENST00000487109 WRNQ14191 1432 aaPredicted RBP eCLIP15.98■□□□□ 0.15
ABCA2-218ENST00000487109 PPM1GO15355 546 aaPredicted RBP15.97■□□□□ 0.15
ABCA2-218ENST00000487109 KCNJ4P48050 445 aa15.97■□□□□ 0.15
ABCA2-218ENST00000487109 OS9Q13438 667 aaPredicted RBP15.97■□□□□ 0.15
ABCA2-218ENST00000487109 BAZ1AQ9NRL2 1556 aaPredicted RBP15.97■□□□□ 0.15
ABCA2-218ENST00000487109 LAS1LQ9Y4W2 734 aaKnown RBP15.97■□□□□ 0.15
ABCA2-218ENST00000487109 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
ABCA2-218ENST00000487109 HSP90AB1P08238 724 aaKnown RBP15.96■□□□□ 0.15
ABCA2-218ENST00000487109 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.14
ABCA2-218ENST00000487109 KCNH8Q96L42 1107 aa15.95■□□□□ 0.14
ABCA2-218ENST00000487109 PRM3Q9NNZ6 103 aa15.95■□□□□ 0.14
ABCA2-218ENST00000487109 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
ABCA2-218ENST00000487109 KIAA2012Q0VF49 1180 aa15.94■□□□□ 0.14
ABCA2-218ENST00000487109 CFDP1Q9UEE9 299 aaPredicted RBP15.93■□□□□ 0.14
ABCA2-218ENST00000487109 GOLGA6L4A6NEF3 574 aa15.93■□□□□ 0.14
ABCA2-218ENST00000487109 DRC7Q8IY82 874 aa15.92■□□□□ 0.14
ABCA2-218ENST00000487109 NOC3LQ8WTT2 800 aaKnown RBP15.91■□□□□ 0.14
ABCA2-218ENST00000487109 FHAD1B1AJZ9 1412 aa15.9■□□□□ 0.14
ABCA2-218ENST00000487109 ISY1Q9ULR0 285 aaKnown RBP15.9■□□□□ 0.14
ABCA2-218ENST00000487109 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
ABCA2-218ENST00000487109 PNNQ9H307 717 aaKnown RBP15.88■□□□□ 0.13
ABCA2-218ENST00000487109 RRP7BPQ9NSQ0 103 aa15.88■□□□□ 0.13
ABCA2-218ENST00000487109 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
ABCA2-218ENST00000487109 MSNP26038 577 aaKnown RBP15.88■□□□□ 0.13
ABCA2-218ENST00000487109 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
ABCA2-218ENST00000487109 CEP162Q5TB80 1403 aa15.87■□□□□ 0.13
ABCA2-218ENST00000487109 KANK1Q14678 1352 aa15.87■□□□□ 0.13
ABCA2-218ENST00000487109 LMOD2Q6P5Q4 547 aa15.87■□□□□ 0.13
ABCA2-218ENST00000487109 MAPK8IP3Q9UPT6 1336 aa15.87■□□□□ 0.13
ABCA2-218ENST00000487109 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
ABCA2-218ENST00000487109 GNL2Q13823 731 aaKnown RBP15.85■□□□□ 0.13
ABCA2-218ENST00000487109 NUDCQ9Y266 331 aa15.84■□□□□ 0.13
ABCA2-218ENST00000487109 TNIKQ9UKE5 1360 aa15.82■□□□□ 0.12
ABCA2-218ENST00000487109 HIRIP3Q9BW71 556 aaPredicted RBP15.82■□□□□ 0.12
ABCA2-218ENST00000487109 MCCP23508 829 aa15.8■□□□□ 0.12
ABCA2-218ENST00000487109 NEUROD2Q15784 382 aa15.79■□□□□ 0.12
ABCA2-218ENST00000487109 CCNB3Q8WWL7 1395 aa15.79■□□□□ 0.12
ABCA2-218ENST00000487109 MS4A1P11836 297 aa15.78■□□□□ 0.12
ABCA2-218ENST00000487109 HSCBQ8IWL3 235 aa15.78■□□□□ 0.12
ABCA2-218ENST00000487109 POGKQ9P215 609 aa15.78■□□□□ 0.12
ABCA2-218ENST00000487109 RGS3P49796 1198 aa15.77■□□□□ 0.12
ABCA2-218ENST00000487109 FRAT1Q92837 279 aaPredicted RBP15.77■□□□□ 0.12
ABCA2-218ENST00000487109 A0A0U1RQG5 324 aaPredicted RBP15.76■□□□□ 0.11
ABCA2-218ENST00000487109 CARD11Q9BXL7 1154 aa15.76■□□□□ 0.11
ABCA2-218ENST00000487109 RGL3Q3MIN7 710 aa15.75■□□□□ 0.11
ABCA2-218ENST00000487109 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
ABCA2-218ENST00000487109 SENP3-EIF4A1A0A087X0R7 540 aa15.73■□□□□ 0.11
ABCA2-218ENST00000487109 CARMIL2Q6F5E8 1435 aa15.72■□□□□ 0.11
ABCA2-218ENST00000487109 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
ABCA2-218ENST00000487109 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.11
ABCA2-218ENST00000487109 TNNT3P45378 269 aaPredicted RBP15.71■□□□□ 0.1
ABCA2-218ENST00000487109 SUPT16HQ9Y5B9 1047 aaKnown RBP15.7■□□□□ 0.1
ABCA2-218ENST00000487109 GOLGA6L1Q8N7Z2 621 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms