RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
SMARCAL1-212ENST00000486983 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
SMARCAL1-212ENST00000486983 PLSCR2Q9NRY7 297 aa13.79□□□□□ -0.2
SMARCAL1-212ENST00000486983 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
SMARCAL1-212ENST00000486983 SLC39A7Q92504 469 aa13.75□□□□□ -0.21
SMARCAL1-212ENST00000486983 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
SMARCAL1-212ENST00000486983 C7P10643 843 aa13.72□□□□□ -0.21
SMARCAL1-212ENST00000486983 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
SMARCAL1-212ENST00000486983 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
SMARCAL1-212ENST00000486983 POTEMA6NI47 508 aa13.67□□□□□ -0.22
SMARCAL1-212ENST00000486983 RASEFQ8IZ41 740 aa13.65□□□□□ -0.22
SMARCAL1-212ENST00000486983 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
SMARCAL1-212ENST00000486983 POTEGQ6S5H5 508 aa13.63□□□□□ -0.23
SMARCAL1-212ENST00000486983 MIER1Q8N108 512 aa13.63□□□□□ -0.23
SMARCAL1-212ENST00000486983 BMP2KQ9NSY1 1161 aaPredicted RBP13.63□□□□□ -0.23
SMARCAL1-212ENST00000486983 MAP3K13O43283 966 aa13.61□□□□□ -0.23
SMARCAL1-212ENST00000486983 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
SMARCAL1-212ENST00000486983 MAMSTRQ6ZN01 415 aa13.59□□□□□ -0.23
SMARCAL1-212ENST00000486983 POTEFA5A3E0 1075 aa13.57□□□□□ -0.24
SMARCAL1-212ENST00000486983 TIE1P35590 1138 aa13.55□□□□□ -0.24
SMARCAL1-212ENST00000486983 SCUBE2Q9NQ36 999 aa13.52□□□□□ -0.25
SMARCAL1-212ENST00000486983 LCE2DQ5TA82 110 aaPredicted RBP13.51□□□□□ -0.25
SMARCAL1-212ENST00000486983 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
SMARCAL1-212ENST00000486983 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
SMARCAL1-212ENST00000486983 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.25
SMARCAL1-212ENST00000486983 NUBP1P53384 320 aa13.44□□□□□ -0.26
SMARCAL1-212ENST00000486983 PCDHB13Q9Y5F0 798 aa13.43□□□□□ -0.26
SMARCAL1-212ENST00000486983 FAM163AQ96GL9 167 aaPredicted RBP13.42□□□□□ -0.26
SMARCAL1-212ENST00000486983 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
SMARCAL1-212ENST00000486983 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
SMARCAL1-212ENST00000486983 SEC24BO95487 1268 aa13.4□□□□□ -0.26
SMARCAL1-212ENST00000486983 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
SMARCAL1-212ENST00000486983 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
SMARCAL1-212ENST00000486983 IER5LQ5T953 404 aa13.36□□□□□ -0.27
SMARCAL1-212ENST00000486983 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
SMARCAL1-212ENST00000486983 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
SMARCAL1-212ENST00000486983 FKBP8Q14318 412 aa13.31□□□□□ -0.28
SMARCAL1-212ENST00000486983 TMEM106CQ9BVX2 250 aa13.29□□□□□ -0.28
SMARCAL1-212ENST00000486983 PLCG2P16885 1265 aa13.21□□□□□ -0.29
SMARCAL1-212ENST00000486983 SLAIN1Q8ND83 568 aa13.2□□□□□ -0.3
SMARCAL1-212ENST00000486983 IRX5P78411 483 aaPredicted RBP13.19□□□□□ -0.3
SMARCAL1-212ENST00000486983 PYGBP11216 843 aa13.18□□□□□ -0.3
SMARCAL1-212ENST00000486983 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
SMARCAL1-212ENST00000486983 CCDC180Q9P1Z9 1646 aa13.15□□□□□ -0.3
SMARCAL1-212ENST00000486983 ST18O60284 1047 aa13.13□□□□□ -0.31
SMARCAL1-212ENST00000486983 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
SMARCAL1-212ENST00000486983 PCDHB8Q9UN66 801 aa13.12□□□□□ -0.31
SMARCAL1-212ENST00000486983 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
SMARCAL1-212ENST00000486983 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
SMARCAL1-212ENST00000486983 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.99□□□□□ -0.33
SMARCAL1-212ENST00000486983 VASPP50552 380 aaPredicted RBP12.98□□□□□ -0.33
SMARCAL1-212ENST00000486983 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-212ENST00000486983 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
SMARCAL1-212ENST00000486983 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
SMARCAL1-212ENST00000486983 GSE1Q14687 1217 aa12.95□□□□□ -0.34
SMARCAL1-212ENST00000486983 TMEM121BQ9BXQ6 578 aaPredicted RBP12.95□□□□□ -0.34
SMARCAL1-212ENST00000486983 SNPHO15079 494 aa12.91□□□□□ -0.34
SMARCAL1-212ENST00000486983 MARVELD3Q96A59 401 aa12.9□□□□□ -0.34
SMARCAL1-212ENST00000486983 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
SMARCAL1-212ENST00000486983 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
SMARCAL1-212ENST00000486983 GOLGA2Q08379 1002 aa12.88□□□□□ -0.35
SMARCAL1-212ENST00000486983 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
SMARCAL1-212ENST00000486983 ZCCHC6Q5VYS8 1495 aaKnown RBP12.87□□□□□ -0.35
SMARCAL1-212ENST00000486983 PSEN1P49768 467 aa12.87□□□□□ -0.35
SMARCAL1-212ENST00000486983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMARCAL1-212ENST00000486983 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-212ENST00000486983 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
SMARCAL1-212ENST00000486983 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
SMARCAL1-212ENST00000486983 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
SMARCAL1-212ENST00000486983 ILDR1Q86SU0 546 aaPredicted RBP12.79□□□□□ -0.36
SMARCAL1-212ENST00000486983 EMP3P54852 163 aa12.77□□□□□ -0.37
SMARCAL1-212ENST00000486983 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
SMARCAL1-212ENST00000486983 IFNLR1Q8IU57 520 aaPredicted RBP12.73□□□□□ -0.37
SMARCAL1-212ENST00000486983 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
SMARCAL1-212ENST00000486983 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
SMARCAL1-212ENST00000486983 POTEB3A0JP26 581 aa12.71□□□□□ -0.37
SMARCAL1-212ENST00000486983 POTEBQ6S5H4 581 aa12.71□□□□□ -0.37
SMARCAL1-212ENST00000486983 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-212ENST00000486983 HS3ST6Q96QI5 342 aa12.69□□□□□ -0.38
SMARCAL1-212ENST00000486983 KRTAP3-3Q9BYR6 98 aa12.68□□□□□ -0.38
SMARCAL1-212ENST00000486983 KRTAP3-2Q9BYR7 98 aa12.68□□□□□ -0.38
SMARCAL1-212ENST00000486983 FAM205CA6NFA0 338 aa12.67□□□□□ -0.38
SMARCAL1-212ENST00000486983 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
SMARCAL1-212ENST00000486983 DCAF1Q9Y4B6 1507 aa12.66□□□□□ -0.38
SMARCAL1-212ENST00000486983 HOXB3P14651 431 aaPredicted RBP12.63□□□□□ -0.39
SMARCAL1-212ENST00000486983 G3V3G9 751 aa12.62□□□□□ -0.39
SMARCAL1-212ENST00000486983 ABCC9O60706 1549 aa12.57□□□□□ -0.4
SMARCAL1-212ENST00000486983 EFCAB3Q8N7B9 438 aa12.54□□□□□ -0.4
SMARCAL1-212ENST00000486983 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-212ENST00000486983 ZNF710Q8N1W2 664 aa12.51□□□□□ -0.41
SMARCAL1-212ENST00000486983 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
SMARCAL1-212ENST00000486983 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
SMARCAL1-212ENST00000486983 SHROOM4Q9ULL8 1493 aa12.47□□□□□ -0.41
SMARCAL1-212ENST00000486983 ERBB3P21860 1342 aa12.45□□□□□ -0.42
SMARCAL1-212ENST00000486983 TMEM92Q6UXU6 159 aa12.45□□□□□ -0.42
SMARCAL1-212ENST00000486983 MICALL2Q8IY33 904 aa12.45□□□□□ -0.42
SMARCAL1-212ENST00000486983 RNF25Q96BH1 459 aaPredicted RBP12.42□□□□□ -0.42
SMARCAL1-212ENST00000486983 RIMBP2O15034 1052 aa12.41□□□□□ -0.42
SMARCAL1-212ENST00000486983 MYO15BQ96JP2 1530 aa12.41□□□□□ -0.42
SMARCAL1-212ENST00000486983 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms