RNA–Protein interactions for RNA: ENST00000486920.1

GBE1-204, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

TSL 3

Gene GBE1, Length 576 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-204ENST00000486920 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
GBE1-204ENST00000486920 POTEFA5A3E0 1075 aa11.15□□□□□ -0.62
GBE1-204ENST00000486920 PAK3O75914 559 aaPredicted RBP11.15□□□□□ -0.62
GBE1-204ENST00000486920 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
GBE1-204ENST00000486920 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
GBE1-204ENST00000486920 C7P10643 843 aa11.1□□□□□ -0.63
GBE1-204ENST00000486920 ATN1P54259 1190 aaPredicted RBP11.1□□□□□ -0.63
GBE1-204ENST00000486920 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
GBE1-204ENST00000486920 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
GBE1-204ENST00000486920 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
GBE1-204ENST00000486920 KIF12Q96FN5 646 aa11.03□□□□□ -0.64
GBE1-204ENST00000486920 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.65
GBE1-204ENST00000486920 PROM2Q8N271 834 aa11.01□□□□□ -0.65
GBE1-204ENST00000486920 FAM163AQ96GL9 167 aaPredicted RBP11.01□□□□□ -0.65
GBE1-204ENST00000486920 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
GBE1-204ENST00000486920 MAMSTRQ6ZN01 415 aa10.97□□□□□ -0.65
GBE1-204ENST00000486920 COLQQ9Y215 455 aaPredicted RBP10.96□□□□□ -0.65
GBE1-204ENST00000486920 MAP3K13O43283 966 aa10.94□□□□□ -0.66
GBE1-204ENST00000486920 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
GBE1-204ENST00000486920 SCUBE2Q9NQ36 999 aa10.9□□□□□ -0.66
GBE1-204ENST00000486920 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
GBE1-204ENST00000486920 TTLL13PA6NNM8 815 aa10.86□□□□□ -0.67
GBE1-204ENST00000486920 TIE1P35590 1138 aa10.86□□□□□ -0.67
GBE1-204ENST00000486920 CDAN1Q8IWY9 1227 aa10.81□□□□□ -0.68
GBE1-204ENST00000486920 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
GBE1-204ENST00000486920 ST18O60284 1047 aa10.74□□□□□ -0.69
GBE1-204ENST00000486920 SEC24BO95487 1268 aa10.72□□□□□ -0.69
GBE1-204ENST00000486920 NUBP1P53384 320 aa10.7□□□□□ -0.7
GBE1-204ENST00000486920 IER5LQ5T953 404 aa10.7□□□□□ -0.7
GBE1-204ENST00000486920 IFNL1Q8IU54 200 aa10.7□□□□□ -0.7
GBE1-204ENST00000486920 MIER1Q8N108 512 aa10.7□□□□□ -0.7
GBE1-204ENST00000486920 SLAIN1Q8ND83 568 aa10.68□□□□□ -0.7
GBE1-204ENST00000486920 PCDHB13Q9Y5F0 798 aa10.68□□□□□ -0.7
GBE1-204ENST00000486920 SGIP1Q9BQI5 828 aa10.65□□□□□ -0.7
GBE1-204ENST00000486920 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
GBE1-204ENST00000486920 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
GBE1-204ENST00000486920 MMRN1Q13201 1228 aa10.6□□□□□ -0.71
GBE1-204ENST00000486920 SPNS2Q8IVW8 549 aa10.6□□□□□ -0.71
GBE1-204ENST00000486920 PLCG2P16885 1265 aa10.54□□□□□ -0.72
GBE1-204ENST00000486920 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
GBE1-204ENST00000486920 PLCD3Q8N3E9 789 aa10.53□□□□□ -0.72
GBE1-204ENST00000486920 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
GBE1-204ENST00000486920 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
GBE1-204ENST00000486920 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
GBE1-204ENST00000486920 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
GBE1-204ENST00000486920 TMEM121BQ9BXQ6 578 aaPredicted RBP10.46□□□□□ -0.73
GBE1-204ENST00000486920 PCDHB8Q9UN66 801 aa10.46□□□□□ -0.73
GBE1-204ENST00000486920 PYGBP11216 843 aa10.44□□□□□ -0.74
GBE1-204ENST00000486920 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
GBE1-204ENST00000486920 FAM212AQ96EL1 285 aa10.44□□□□□ -0.74
GBE1-204ENST00000486920 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
GBE1-204ENST00000486920 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
GBE1-204ENST00000486920 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
GBE1-204ENST00000486920 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
GBE1-204ENST00000486920 SNPHO15079 494 aa10.34□□□□□ -0.75
GBE1-204ENST00000486920 DCAF8Q5TAQ9 597 aa10.34□□□□□ -0.75
GBE1-204ENST00000486920 HS3ST6Q96QI5 342 aa10.33□□□□□ -0.76
GBE1-204ENST00000486920 EMP3P54852 163 aa10.31□□□□□ -0.76
GBE1-204ENST00000486920 FAM205CA6NFA0 338 aa10.28□□□□□ -0.76
GBE1-204ENST00000486920 DPY19L2Q6NUT2 758 aa10.27□□□□□ -0.77
GBE1-204ENST00000486920 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
GBE1-204ENST00000486920 HOXB3P14651 431 aaPredicted RBP10.24□□□□□ -0.77
GBE1-204ENST00000486920 FKBP8Q14318 412 aa10.23□□□□□ -0.77
GBE1-204ENST00000486920 C3orf67Q6ZVT6 689 aa10.22□□□□□ -0.77
GBE1-204ENST00000486920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.21□□□□□ -0.773e-7■■■□□ 17
GBE1-204ENST00000486920 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
GBE1-204ENST00000486920 MKRN3Q13064 507 aaKnown RBP10.18□□□□□ -0.78
GBE1-204ENST00000486920 PSEN1P49768 467 aa10.17□□□□□ -0.78
GBE1-204ENST00000486920 ZNF467Q7Z7K2 595 aaPredicted RBP10.16□□□□□ -0.78
GBE1-204ENST00000486920 CHRM1P11229 460 aaPredicted RBP10.15□□□□□ -0.78
GBE1-204ENST00000486920 HOXB1P14653 301 aaPredicted RBP10.1□□□□□ -0.79
GBE1-204ENST00000486920 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
GBE1-204ENST00000486920 GSE1Q14687 1217 aa10.08□□□□□ -0.8
GBE1-204ENST00000486920 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
GBE1-204ENST00000486920 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
GBE1-204ENST00000486920 TMEM92Q6UXU6 159 aa10.05□□□□□ -0.8
GBE1-204ENST00000486920 CABP2Q9NPB3 220 aa10.05□□□□□ -0.8
GBE1-204ENST00000486920 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
GBE1-204ENST00000486920 KLHL34Q8N239 644 aa10.01□□□□□ -0.81
GBE1-204ENST00000486920 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
GBE1-204ENST00000486920 ERBB3P21860 1342 aa10.01□□□□□ -0.81
GBE1-204ENST00000486920 VARS2Q5ST30 1063 aaKnown RBP9.99□□□□□ -0.81
GBE1-204ENST00000486920 FBXO3Q9UK99 471 aa9.99□□□□□ -0.81
GBE1-204ENST00000486920 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
GBE1-204ENST00000486920 DOK7Q18PE1 504 aa9.94□□□□□ -0.82
GBE1-204ENST00000486920 GPR153Q6NV75 609 aa9.94□□□□□ -0.82
GBE1-204ENST00000486920 EFCAB3Q8N7B9 438 aa9.93□□□□□ -0.82
GBE1-204ENST00000486920 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
GBE1-204ENST00000486920 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
GBE1-204ENST00000486920 ZNF687Q8N1G0 1237 aa9.92□□□□□ -0.82
GBE1-204ENST00000486920 MICALL2Q8IY33 904 aa9.89□□□□□ -0.83
GBE1-204ENST00000486920 MS4A4AQ96JQ5 239 aa9.89□□□□□ -0.83
GBE1-204ENST00000486920 G3V3G9 751 aa9.87□□□□□ -0.83
GBE1-204ENST00000486920 KHSRPQ92945 711 aaKnown RBP eCLIP9.86□□□□□ -0.83
GBE1-204ENST00000486920 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
GBE1-204ENST00000486920 SPOCK2Q92563 424 aa9.83□□□□□ -0.84
GBE1-204ENST00000486920 ZSWIM6Q9HCJ5 1215 aa9.83□□□□□ -0.84
GBE1-204ENST00000486920 ARSIQ5FYB1 569 aa9.82□□□□□ -0.84
GBE1-204ENST00000486920 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
GBE1-204ENST00000486920 POTEEQ6S8J3 1075 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms