RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 ASTLQ6HA08 431 aaPredicted RBP12.37□□□□□ -0.43
PHTF1-211ENST00000486855 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
PHTF1-211ENST00000486855 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
PHTF1-211ENST00000486855 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
PHTF1-211ENST00000486855 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
PHTF1-211ENST00000486855 METRNQ9UJH8 293 aa12.29□□□□□ -0.44
PHTF1-211ENST00000486855 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
PHTF1-211ENST00000486855 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
PHTF1-211ENST00000486855 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
PHTF1-211ENST00000486855 ATN1P54259 1190 aaPredicted RBP12.23□□□□□ -0.45
PHTF1-211ENST00000486855 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
PHTF1-211ENST00000486855 C7P10643 843 aa12.21□□□□□ -0.45
PHTF1-211ENST00000486855 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
PHTF1-211ENST00000486855 RASEFQ8IZ41 740 aa12.19□□□□□ -0.46
PHTF1-211ENST00000486855 POTEMA6NI47 508 aa12.18□□□□□ -0.46
PHTF1-211ENST00000486855 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
PHTF1-211ENST00000486855 LCE2DQ5TA82 110 aaPredicted RBP12.16□□□□□ -0.46
PHTF1-211ENST00000486855 MAP3K13O43283 966 aa12.15□□□□□ -0.46
PHTF1-211ENST00000486855 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
PHTF1-211ENST00000486855 MIER1Q8N108 512 aa12.1□□□□□ -0.47
PHTF1-211ENST00000486855 TIE1P35590 1138 aa12.08□□□□□ -0.48
PHTF1-211ENST00000486855 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
PHTF1-211ENST00000486855 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
PHTF1-211ENST00000486855 COLQQ9Y215 455 aaPredicted RBP12.04□□□□□ -0.48
PHTF1-211ENST00000486855 NUBP1P53384 320 aa12.02□□□□□ -0.49
PHTF1-211ENST00000486855 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
PHTF1-211ENST00000486855 SCUBE2Q9NQ36 999 aa11.99□□□□□ -0.49
PHTF1-211ENST00000486855 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
PHTF1-211ENST00000486855 SGIP1Q9BQI5 828 aa11.95□□□□□ -0.5
PHTF1-211ENST00000486855 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
PHTF1-211ENST00000486855 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
PHTF1-211ENST00000486855 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
PHTF1-211ENST00000486855 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
PHTF1-211ENST00000486855 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
PHTF1-211ENST00000486855 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
PHTF1-211ENST00000486855 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
PHTF1-211ENST00000486855 IER5LQ5T953 404 aa11.88□□□□□ -0.51
PHTF1-211ENST00000486855 SEC24BO95487 1268 aa11.87□□□□□ -0.51
PHTF1-211ENST00000486855 FKBP8Q14318 412 aa11.84□□□□□ -0.51
PHTF1-211ENST00000486855 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
PHTF1-211ENST00000486855 NACADO15069 1562 aa11.84□□□□□ -0.51
PHTF1-211ENST00000486855 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
PHTF1-211ENST00000486855 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
PHTF1-211ENST00000486855 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
PHTF1-211ENST00000486855 SLAIN1Q8ND83 568 aa11.74□□□□□ -0.53
PHTF1-211ENST00000486855 PYGBP11216 843 aa11.73□□□□□ -0.53
PHTF1-211ENST00000486855 MYO15BQ96JP2 1530 aa11.73□□□□□ -0.53
PHTF1-211ENST00000486855 ST18O60284 1047 aa11.72□□□□□ -0.53
PHTF1-211ENST00000486855 PLCG2P16885 1265 aa11.71□□□□□ -0.53
PHTF1-211ENST00000486855 CDAN1Q8IWY9 1227 aa11.7□□□□□ -0.54
PHTF1-211ENST00000486855 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
PHTF1-211ENST00000486855 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
PHTF1-211ENST00000486855 ZCCHC6Q5VYS8 1495 aaKnown RBP11.68□□□□□ -0.54
PHTF1-211ENST00000486855 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
PHTF1-211ENST00000486855 BICRAQ9NZM4 1560 aa11.65□□□□□ -0.54
PHTF1-211ENST00000486855 DCAF1Q9Y4B6 1507 aa11.62□□□□□ -0.55
PHTF1-211ENST00000486855 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
PHTF1-211ENST00000486855 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
PHTF1-211ENST00000486855 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
PHTF1-211ENST00000486855 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
PHTF1-211ENST00000486855 TMEM121BQ9BXQ6 578 aaPredicted RBP11.51□□□□□ -0.57
PHTF1-211ENST00000486855 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
PHTF1-211ENST00000486855 DCAF8L2P0C7V8 631 aa11.49□□□□□ -0.57
PHTF1-211ENST00000486855 GSE1Q14687 1217 aa11.49□□□□□ -0.57
PHTF1-211ENST00000486855 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
PHTF1-211ENST00000486855 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
PHTF1-211ENST00000486855 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
PHTF1-211ENST00000486855 SCRIBQ14160 1630 aa11.46□□□□□ -0.57
PHTF1-211ENST00000486855 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
PHTF1-211ENST00000486855 PSEN1P49768 467 aa11.45□□□□□ -0.58
PHTF1-211ENST00000486855 SPNS2Q8IVW8 549 aa11.45□□□□□ -0.58
PHTF1-211ENST00000486855 SNPHO15079 494 aa11.44□□□□□ -0.58
PHTF1-211ENST00000486855 MMRN1Q13201 1228 aa11.43□□□□□ -0.58
PHTF1-211ENST00000486855 POTEB3A0JP26 581 aa11.42□□□□□ -0.58
PHTF1-211ENST00000486855 MKRN3Q13064 507 aaKnown RBP11.42□□□□□ -0.58
PHTF1-211ENST00000486855 POTEBQ6S5H4 581 aa11.42□□□□□ -0.58
PHTF1-211ENST00000486855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.58
PHTF1-211ENST00000486855 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
PHTF1-211ENST00000486855 C3orf67Q6ZVT6 689 aa11.4□□□□□ -0.58
PHTF1-211ENST00000486855 SHROOM4Q9ULL8 1493 aa11.39□□□□□ -0.59
PHTF1-211ENST00000486855 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
PHTF1-211ENST00000486855 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
PHTF1-211ENST00000486855 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
PHTF1-211ENST00000486855 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
PHTF1-211ENST00000486855 KRTAP3-3Q9BYR6 98 aa11.35□□□□□ -0.59
PHTF1-211ENST00000486855 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
PHTF1-211ENST00000486855 EMP3P54852 163 aa11.33□□□□□ -0.6
PHTF1-211ENST00000486855 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
PHTF1-211ENST00000486855 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
PHTF1-211ENST00000486855 HOXB3P14651 431 aaPredicted RBP11.3□□□□□ -0.6
PHTF1-211ENST00000486855 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
PHTF1-211ENST00000486855 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
PHTF1-211ENST00000486855 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
PHTF1-211ENST00000486855 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
PHTF1-211ENST00000486855 CIZ1Q9ULV3 898 aaPredicted RBP11.26□□□□□ -0.61
PHTF1-211ENST00000486855 BOLA1Q9Y3E2 137 aa11.26□□□□□ -0.61
PHTF1-211ENST00000486855 EFCAB3Q8N7B9 438 aa11.18□□□□□ -0.62
PHTF1-211ENST00000486855 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
PHTF1-211ENST00000486855 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
PHTF1-211ENST00000486855 CECR2Q9BXF3 1484 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms