RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 GSE1Q14687 1217 aa11.26□□□□□ -0.61
USP41-204ENST00000486536 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.61
USP41-204ENST00000486536 NUBP1P53384 320 aa11.2□□□□□ -0.62
USP41-204ENST00000486536 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
USP41-204ENST00000486536 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
USP41-204ENST00000486536 NBR1Q14596 966 aa11.16□□□□□ -0.62
USP41-204ENST00000486536 DCAF1Q9Y4B6 1507 aa11.15□□□□□ -0.62
USP41-204ENST00000486536 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
USP41-204ENST00000486536 NKX1-1Q15270 411 aaPredicted RBP11.13□□□□□ -0.63
USP41-204ENST00000486536 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
USP41-204ENST00000486536 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
USP41-204ENST00000486536 CACNB1Q02641 598 aaPredicted RBP11.08□□□□□ -0.64
USP41-204ENST00000486536 MYO15BQ96JP2 1530 aa11.08□□□□□ -0.64
USP41-204ENST00000486536 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
USP41-204ENST00000486536 STK25O00506 426 aa11.06□□□□□ -0.64
USP41-204ENST00000486536 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
USP41-204ENST00000486536 CHRM1P11229 460 aaPredicted RBP11.05□□□□□ -0.64
USP41-204ENST00000486536 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
USP41-204ENST00000486536 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
USP41-204ENST00000486536 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
USP41-204ENST00000486536 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
USP41-204ENST00000486536 AKT1S1Q96B36 256 aa11.02□□□□□ -0.65
USP41-204ENST00000486536 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
USP41-204ENST00000486536 RASEFQ8IZ41 740 aa10.98□□□□□ -0.65
USP41-204ENST00000486536 NACADO15069 1562 aa10.98□□□□□ -0.65
USP41-204ENST00000486536 RBM42Q9BTD8 480 aaKnown RBP10.97□□□□□ -0.65
USP41-204ENST00000486536 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
USP41-204ENST00000486536 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
USP41-204ENST00000486536 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
USP41-204ENST00000486536 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
USP41-204ENST00000486536 RYDENQ9NUL5 291 aaKnown RBP10.94□□□□□ -0.66
USP41-204ENST00000486536 REM2Q8IYK8 340 aaPredicted RBP10.93□□□□□ -0.66
USP41-204ENST00000486536 PYGBP11216 843 aa10.92□□□□□ -0.66
USP41-204ENST00000486536 RB1CC1Q8TDY2 1594 aa10.89□□□□□ -0.67
USP41-204ENST00000486536 SHROOM4Q9ULL8 1493 aa10.81□□□□□ -0.68
USP41-204ENST00000486536 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
USP41-204ENST00000486536 PITPNM1O00562 1244 aa10.78□□□□□ -0.68
USP41-204ENST00000486536 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
USP41-204ENST00000486536 ZNF467Q7Z7K2 595 aaPredicted RBP10.75□□□□□ -0.69
USP41-204ENST00000486536 TSPYL2Q9H2G4 693 aaPredicted RBP10.75□□□□□ -0.69
USP41-204ENST00000486536 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
USP41-204ENST00000486536 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
USP41-204ENST00000486536 TULP1O00294 542 aaPredicted RBP10.72□□□□□ -0.69
USP41-204ENST00000486536 PDAP1Q13442 181 aaKnown RBP10.72□□□□□ -0.69
USP41-204ENST00000486536 SCRIBQ14160 1630 aa10.71□□□□□ -0.69
USP41-204ENST00000486536 PCDHB8Q9UN66 801 aa10.7□□□□□ -0.7
USP41-204ENST00000486536 TIMELESSQ9UNS1 1208 aa10.7□□□□□ -0.7
USP41-204ENST00000486536 PCDHB13Q9Y5F0 798 aa10.7□□□□□ -0.7
USP41-204ENST00000486536 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
USP41-204ENST00000486536 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
USP41-204ENST00000486536 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.7
USP41-204ENST00000486536 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
USP41-204ENST00000486536 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
USP41-204ENST00000486536 PSEN1P49768 467 aa10.65□□□□□ -0.7
USP41-204ENST00000486536 LMOD2Q6P5Q4 547 aa10.65□□□□□ -0.7
USP41-204ENST00000486536 MFRPQ9BY79 579 aa10.64□□□□□ -0.71
USP41-204ENST00000486536 ZNF579Q8NAF0 562 aaKnown RBP10.63□□□□□ -0.71
USP41-204ENST00000486536 ERICH6Q7L0X2 663 aa10.6□□□□□ -0.71
USP41-204ENST00000486536 CCDC61Q9Y6R9 512 aa10.6□□□□□ -0.71
USP41-204ENST00000486536 UNC13AQ9UPW8 1703 aa10.58□□□□□ -0.72
USP41-204ENST00000486536 PPP1R37O75864 691 aa10.58□□□□□ -0.72
USP41-204ENST00000486536 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
USP41-204ENST00000486536 E2F4Q16254 413 aa10.55□□□□□ -0.72
USP41-204ENST00000486536 NLRP6P59044 892 aa10.54□□□□□ -0.72
USP41-204ENST00000486536 EFCAB3Q8N7B9 438 aa10.54□□□□□ -0.72
USP41-204ENST00000486536 SOX12O15370 315 aa10.53□□□□□ -0.72
USP41-204ENST00000486536 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
USP41-204ENST00000486536 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
USP41-204ENST00000486536 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
USP41-204ENST00000486536 BICRAQ9NZM4 1560 aa10.52□□□□□ -0.73
USP41-204ENST00000486536 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
USP41-204ENST00000486536 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
USP41-204ENST00000486536 PHF8Q9UPP1 1060 aa10.5□□□□□ -0.73
USP41-204ENST00000486536 PAK3O75914 559 aaPredicted RBP10.49□□□□□ -0.73
USP41-204ENST00000486536 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
USP41-204ENST00000486536 SEMA3EO15041 775 aa10.48□□□□□ -0.73
USP41-204ENST00000486536 MAP3K13O43283 966 aa10.48□□□□□ -0.73
USP41-204ENST00000486536 BRPF1P55201 1214 aaPredicted RBP10.48□□□□□ -0.73
USP41-204ENST00000486536 KIF12Q96FN5 646 aa10.47□□□□□ -0.73
USP41-204ENST00000486536 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
USP41-204ENST00000486536 PDE4AP27815 886 aa10.43□□□□□ -0.74
USP41-204ENST00000486536 C14orf37Q86TY3 774 aa10.43□□□□□ -0.74
USP41-204ENST00000486536 LARP6Q9BRS8 491 aaKnown RBP10.43□□□□□ -0.74
USP41-204ENST00000486536 NCKAP5LQ9HCH0 1330 aa10.42□□□□□ -0.74
USP41-204ENST00000486536 SLC24A3Q9HC58 644 aa10.41□□□□□ -0.74
USP41-204ENST00000486536 NEUROD2Q15784 382 aa10.4□□□□□ -0.74
USP41-204ENST00000486536 SMYD5Q6GMV2 418 aa10.4□□□□□ -0.74
USP41-204ENST00000486536 CECR2Q9BXF3 1484 aa10.4□□□□□ -0.74
USP41-204ENST00000486536 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
USP41-204ENST00000486536 RSF1Q96T23 1441 aaPredicted RBP10.38□□□□□ -0.75
USP41-204ENST00000486536 BAZ1AQ9NRL2 1556 aaPredicted RBP10.38□□□□□ -0.75
USP41-204ENST00000486536 CC2D2AQ9P2K1 1620 aa10.37□□□□□ -0.75
USP41-204ENST00000486536 MFSD10Q14728 455 aa10.37□□□□□ -0.75
USP41-204ENST00000486536 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
USP41-204ENST00000486536 ARXQ96QS3 562 aa10.37□□□□□ -0.75
USP41-204ENST00000486536 ZMYND10O75800 440 aa10.36□□□□□ -0.75
USP41-204ENST00000486536 CRISPLD2Q9H0B8 497 aa10.35□□□□□ -0.75
USP41-204ENST00000486536 ARIH1Q9Y4X5 557 aaPredicted RBP10.35□□□□□ -0.75
USP41-204ENST00000486536 DDX27Q96GQ7 796 aaKnown RBP10.34□□□□□ -0.75
USP41-204ENST00000486536 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms