RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
NHLRC3-205ENST00000485407 TRIM41Q8WV44 630 aa10.64□□□□□ -0.71
NHLRC3-205ENST00000485407 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
NHLRC3-205ENST00000485407 CUX2O14529 1486 aa10.62□□□□□ -0.71
NHLRC3-205ENST00000485407 EVX2Q03828 476 aa10.61□□□□□ -0.71
NHLRC3-205ENST00000485407 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
NHLRC3-205ENST00000485407 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
NHLRC3-205ENST00000485407 PROM2Q8N271 834 aa10.58□□□□□ -0.72
NHLRC3-205ENST00000485407 PKD2Q13563 968 aa10.56□□□□□ -0.72
NHLRC3-205ENST00000485407 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
NHLRC3-205ENST00000485407 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
NHLRC3-205ENST00000485407 SHROOM4Q9ULL8 1493 aa10.55□□□□□ -0.72
NHLRC3-205ENST00000485407 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
NHLRC3-205ENST00000485407 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.72
NHLRC3-205ENST00000485407 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
NHLRC3-205ENST00000485407 PAXIP1Q6ZW49 1069 aaPredicted RBP10.49□□□□□ -0.73
NHLRC3-205ENST00000485407 BBXQ8WY36 941 aaPredicted RBP10.49□□□□□ -0.73
NHLRC3-205ENST00000485407 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
NHLRC3-205ENST00000485407 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
NHLRC3-205ENST00000485407 ECM2O94769 699 aaPredicted RBP10.39□□□□□ -0.75
NHLRC3-205ENST00000485407 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
NHLRC3-205ENST00000485407 MNX1P50219 401 aaPredicted RBP10.38□□□□□ -0.75
NHLRC3-205ENST00000485407 GABBR2O75899 941 aa10.37□□□□□ -0.75
NHLRC3-205ENST00000485407 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
NHLRC3-205ENST00000485407 ERCC6Q03468 1493 aa10.35□□□□□ -0.75
NHLRC3-205ENST00000485407 SPOCK2Q92563 424 aa10.34□□□□□ -0.75
NHLRC3-205ENST00000485407 SCRIBQ14160 1630 aa10.33□□□□□ -0.76
NHLRC3-205ENST00000485407 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
NHLRC3-205ENST00000485407 TSHZ2Q9NRE2 1034 aa10.31□□□□□ -0.76
NHLRC3-205ENST00000485407 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
NHLRC3-205ENST00000485407 ZNF579Q8NAF0 562 aaKnown RBP10.3□□□□□ -0.76
NHLRC3-205ENST00000485407 CLCN6P51797 869 aa10.27□□□□□ -0.77
NHLRC3-205ENST00000485407 NBR1Q14596 966 aa10.26□□□□□ -0.77
NHLRC3-205ENST00000485407 PAK3O75914 559 aaPredicted RBP10.25□□□□□ -0.77
NHLRC3-205ENST00000485407 MIER1Q8N108 512 aa10.25□□□□□ -0.77
NHLRC3-205ENST00000485407 TULP1O00294 542 aaPredicted RBP10.24□□□□□ -0.77
NHLRC3-205ENST00000485407 TIMELESSQ9UNS1 1208 aa10.24□□□□□ -0.77
NHLRC3-205ENST00000485407 RGL2O15211 777 aa10.23□□□□□ -0.77
NHLRC3-205ENST00000485407 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
NHLRC3-205ENST00000485407 ILDR1Q86SU0 546 aaPredicted RBP10.23□□□□□ -0.77
NHLRC3-205ENST00000485407 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
NHLRC3-205ENST00000485407 PLCD3Q8N3E9 789 aa10.19□□□□□ -0.78
NHLRC3-205ENST00000485407 CHGAP10645 457 aaKnown RBP10.17□□□□□ -0.78
NHLRC3-205ENST00000485407 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
NHLRC3-205ENST00000485407 GALR2O43603 387 aaPredicted RBP10.16□□□□□ -0.78
NHLRC3-205ENST00000485407 POTEIP0CG38 1075 aa10.16□□□□□ -0.78
NHLRC3-205ENST00000485407 TSPYL2Q9H2G4 693 aaPredicted RBP10.14□□□□□ -0.79
NHLRC3-205ENST00000485407 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
NHLRC3-205ENST00000485407 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
NHLRC3-205ENST00000485407 ZBTB47Q9UFB7 747 aaPredicted RBP10.11□□□□□ -0.79
NHLRC3-205ENST00000485407 CCDC61Q9Y6R9 512 aa10.11□□□□□ -0.79
NHLRC3-205ENST00000485407 ARXQ96QS3 562 aa10.1□□□□□ -0.79
NHLRC3-205ENST00000485407 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
NHLRC3-205ENST00000485407 CIZ1Q9ULV3 898 aaPredicted RBP10.09□□□□□ -0.79
NHLRC3-205ENST00000485407 THOC2Q8NI27 1593 aaKnown RBP10.07□□□□□ -0.8
NHLRC3-205ENST00000485407 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
NHLRC3-205ENST00000485407 NUBP1P53384 320 aa10.06□□□□□ -0.8
NHLRC3-205ENST00000485407 MS4A3Q96HJ5 214 aa10.06□□□□□ -0.8
NHLRC3-205ENST00000485407 KIF12Q96FN5 646 aa10.03□□□□□ -0.8
NHLRC3-205ENST00000485407 NESP48681 1621 aa10.01□□□□□ -0.81
NHLRC3-205ENST00000485407 LHX8Q68G74 356 aa10.01□□□□□ -0.81
NHLRC3-205ENST00000485407 MAP3K13O43283 966 aa9.98□□□□□ -0.81
NHLRC3-205ENST00000485407 FAM212AQ96EL1 285 aa9.98□□□□□ -0.81
NHLRC3-205ENST00000485407 NCAPD3P42695 1498 aa9.98□□□□□ -0.81
NHLRC3-205ENST00000485407 ASTLQ6HA08 431 aaPredicted RBP9.97□□□□□ -0.81
NHLRC3-205ENST00000485407 HS6ST3Q8IZP7 471 aa9.97□□□□□ -0.81
NHLRC3-205ENST00000485407 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
NHLRC3-205ENST00000485407 TMEM132AQ24JP5 1023 aa9.96□□□□□ -0.82
NHLRC3-205ENST00000485407 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
NHLRC3-205ENST00000485407 PELP1Q8IZL8 1130 aaKnown RBP9.95□□□□□ -0.82
NHLRC3-205ENST00000485407 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
NHLRC3-205ENST00000485407 RIMBP3CA6NJZ7 1639 aa9.93□□□□□ -0.82
NHLRC3-205ENST00000485407 RIMBP3BA6NNM3 1639 aa9.93□□□□□ -0.82
NHLRC3-205ENST00000485407 RIMBP3Q9UFD9 1639 aa9.93□□□□□ -0.82
NHLRC3-205ENST00000485407 C14orf37Q86TY3 774 aa9.92□□□□□ -0.82
NHLRC3-205ENST00000485407 TRPC6Q9Y210 931 aa9.92□□□□□ -0.82
NHLRC3-205ENST00000485407 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
NHLRC3-205ENST00000485407 HOMEZQ8IX15 550 aa9.91□□□□□ -0.82
NHLRC3-205ENST00000485407 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
NHLRC3-205ENST00000485407 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
NHLRC3-205ENST00000485407 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
NHLRC3-205ENST00000485407 PCDHB13Q9Y5F0 798 aa9.89□□□□□ -0.83
NHLRC3-205ENST00000485407 ATAD2BQ9ULI0 1458 aa9.89□□□□□ -0.83
NHLRC3-205ENST00000485407 PEG3Q9GZU2 1588 aa9.88□□□□□ -0.83
NHLRC3-205ENST00000485407 TIE1P35590 1138 aa9.88□□□□□ -0.83
NHLRC3-205ENST00000485407 ATN1P54259 1190 aaPredicted RBP9.88□□□□□ -0.83
NHLRC3-205ENST00000485407 MROH2BQ7Z745 1585 aa9.86□□□□□ -0.83
NHLRC3-205ENST00000485407 IFNL1Q8IU54 200 aa9.86□□□□□ -0.83
NHLRC3-205ENST00000485407 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
NHLRC3-205ENST00000485407 METRNQ9UJH8 293 aa9.86□□□□□ -0.83
NHLRC3-205ENST00000485407 HMGXB3Q12766 1538 aa9.85□□□□□ -0.83
NHLRC3-205ENST00000485407 POTEB2H3BUK9 544 aa9.84□□□□□ -0.83
NHLRC3-205ENST00000485407 C7P10643 843 aa9.84□□□□□ -0.83
NHLRC3-205ENST00000485407 PYGBP11216 843 aa9.84□□□□□ -0.83
NHLRC3-205ENST00000485407 LAMC3Q9Y6N6 1575 aa9.84□□□□□ -0.83
NHLRC3-205ENST00000485407 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
NHLRC3-205ENST00000485407 ARHGEF11O15085 1522 aa9.83□□□□□ -0.84
NHLRC3-205ENST00000485407 TTLL13PA6NNM8 815 aa9.83□□□□□ -0.84
NHLRC3-205ENST00000485407 GSE1Q14687 1217 aa9.83□□□□□ -0.84
NHLRC3-205ENST00000485407 NKX1-1Q15270 411 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms