RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 ATMINO43313 823 aaPredicted RBP15.63■□□□□ 0.09
VPS8-223ENST00000485024 SLC39A7Q92504 469 aa15.6■□□□□ 0.09
VPS8-223ENST00000485024 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
VPS8-223ENST00000485024 C7P10643 843 aa15.58■□□□□ 0.08
VPS8-223ENST00000485024 MAMSTRQ6ZN01 415 aa15.52■□□□□ 0.08
VPS8-223ENST00000485024 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
VPS8-223ENST00000485024 FAM163AQ96GL9 167 aaPredicted RBP15.5■□□□□ 0.07
VPS8-223ENST00000485024 ATN1P54259 1190 aaPredicted RBP15.45■□□□□ 0.06
VPS8-223ENST00000485024 POTEFA5A3E0 1075 aa15.42■□□□□ 0.06
VPS8-223ENST00000485024 SCUBE2Q9NQ36 999 aa15.42■□□□□ 0.06
VPS8-223ENST00000485024 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
VPS8-223ENST00000485024 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
VPS8-223ENST00000485024 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
VPS8-223ENST00000485024 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
VPS8-223ENST00000485024 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
VPS8-223ENST00000485024 KIF12Q96FN5 646 aa15.3■□□□□ 0.04
VPS8-223ENST00000485024 CDAN1Q8IWY9 1227 aa15.22■□□□□ 0.03
VPS8-223ENST00000485024 COLQQ9Y215 455 aaPredicted RBP15.21■□□□□ 0.03
VPS8-223ENST00000485024 MAP3K13O43283 966 aa15.17■□□□□ 0.02
VPS8-223ENST00000485024 TIE1P35590 1138 aa15.17■□□□□ 0.02
VPS8-223ENST00000485024 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
VPS8-223ENST00000485024 SEC24BO95487 1268 aa15.08■□□□□ 0
VPS8-223ENST00000485024 PROM2Q8N271 834 aa15.08■□□□□ 0
VPS8-223ENST00000485024 RASEFQ8IZ41 740 aa15.06■□□□□ 0
VPS8-223ENST00000485024 ST18O60284 1047 aa15.03■□□□□ -0
VPS8-223ENST00000485024 TRIM35Q9UPQ4 493 aa15.01□□□□□ -0.01
VPS8-223ENST00000485024 IER5LQ5T953 404 aa14.98□□□□□ -0.01
VPS8-223ENST00000485024 SLAIN1Q8ND83 568 aa14.98□□□□□ -0.01
VPS8-223ENST00000485024 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
VPS8-223ENST00000485024 SPNS2Q8IVW8 549 aa14.88□□□□□ -0.03
VPS8-223ENST00000485024 PCDHB13Q9Y5F0 798 aa14.88□□□□□ -0.03
VPS8-223ENST00000485024 MIER1Q8N108 512 aa14.86□□□□□ -0.03
VPS8-223ENST00000485024 SGIP1Q9BQI5 828 aa14.86□□□□□ -0.03
VPS8-223ENST00000485024 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
VPS8-223ENST00000485024 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
VPS8-223ENST00000485024 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
VPS8-223ENST00000485024 PLCG2P16885 1265 aa14.78□□□□□ -0.04
VPS8-223ENST00000485024 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
VPS8-223ENST00000485024 IRX5P78411 483 aaPredicted RBP14.77□□□□□ -0.05
VPS8-223ENST00000485024 TMEM121BQ9BXQ6 578 aaPredicted RBP14.75□□□□□ -0.05
VPS8-223ENST00000485024 MARVELD3Q96A59 401 aa14.73□□□□□ -0.05
VPS8-223ENST00000485024 NUBP1P53384 320 aa14.72□□□□□ -0.05
VPS8-223ENST00000485024 PLCD3Q8N3E9 789 aa14.64□□□□□ -0.07
VPS8-223ENST00000485024 OCEL1Q9H607 264 aa14.63□□□□□ -0.07
VPS8-223ENST00000485024 SNPHO15079 494 aa14.62□□□□□ -0.07
VPS8-223ENST00000485024 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.6□□□□□ -0.07
VPS8-223ENST00000485024 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
VPS8-223ENST00000485024 KRTAP3-3Q9BYR6 98 aa14.54□□□□□ -0.08
VPS8-223ENST00000485024 KRTAP3-2Q9BYR7 98 aa14.54□□□□□ -0.08
VPS8-223ENST00000485024 POTEB3A0JP26 581 aa14.53□□□□□ -0.08
VPS8-223ENST00000485024 POTEBQ6S5H4 581 aa14.53□□□□□ -0.08
VPS8-223ENST00000485024 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
VPS8-223ENST00000485024 EMP3P54852 163 aa14.51□□□□□ -0.09
VPS8-223ENST00000485024 PDCD7Q8N8D1 485 aaKnown RBP14.46□□□□□ -0.09
VPS8-223ENST00000485024 HS3ST6Q96QI5 342 aa14.46□□□□□ -0.09
VPS8-223ENST00000485024 PYGBP11216 843 aa14.44□□□□□ -0.1
VPS8-223ENST00000485024 PCDHB8Q9UN66 801 aa14.44□□□□□ -0.1
VPS8-223ENST00000485024 FAM205CA6NFA0 338 aa14.41□□□□□ -0.1
VPS8-223ENST00000485024 C3orf67Q6ZVT6 689 aa14.39□□□□□ -0.11
VPS8-223ENST00000485024 DCAF8Q5TAQ9 597 aa14.34□□□□□ -0.11
VPS8-223ENST00000485024 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
VPS8-223ENST00000485024 MKRN3Q13064 507 aaKnown RBP14.24□□□□□ -0.13
VPS8-223ENST00000485024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
VPS8-223ENST00000485024 HOXB3P14651 431 aaPredicted RBP14.2□□□□□ -0.14
VPS8-223ENST00000485024 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
VPS8-223ENST00000485024 DPY19L2Q6NUT2 758 aa14.16□□□□□ -0.14
VPS8-223ENST00000485024 ZNF467Q7Z7K2 595 aaPredicted RBP14.16□□□□□ -0.14
VPS8-223ENST00000485024 ILDR1Q86SU0 546 aaPredicted RBP14.16□□□□□ -0.14
VPS8-223ENST00000485024 RNF166Q96A37 237 aaPredicted RBP14.13□□□□□ -0.15
VPS8-223ENST00000485024 HOXB1P14653 301 aaPredicted RBP14.1□□□□□ -0.15
VPS8-223ENST00000485024 PSEN1P49768 467 aa14.1□□□□□ -0.15
VPS8-223ENST00000485024 ERBB3P21860 1342 aa14.05□□□□□ -0.16
VPS8-223ENST00000485024 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
VPS8-223ENST00000485024 CHRM1P11229 460 aaPredicted RBP14.02□□□□□ -0.17
VPS8-223ENST00000485024 ZNF710Q8N1W2 664 aa14.02□□□□□ -0.17
VPS8-223ENST00000485024 GSE1Q14687 1217 aa14.01□□□□□ -0.17
VPS8-223ENST00000485024 MYT1LQ9UL68 1186 aa14□□□□□ -0.17
VPS8-223ENST00000485024 FKBP8Q14318 412 aa13.99□□□□□ -0.17
VPS8-223ENST00000485024 VARS2Q5ST30 1063 aaKnown RBP13.98□□□□□ -0.17
VPS8-223ENST00000485024 DOK7Q18PE1 504 aa13.97□□□□□ -0.17
VPS8-223ENST00000485024 G3V3G9 751 aa13.94□□□□□ -0.18
VPS8-223ENST00000485024 PDAP1Q13442 181 aaKnown RBP13.94□□□□□ -0.18
VPS8-223ENST00000485024 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
VPS8-223ENST00000485024 ZNF687Q8N1G0 1237 aa13.87□□□□□ -0.19
VPS8-223ENST00000485024 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
VPS8-223ENST00000485024 RIMBP2O15034 1052 aa13.84□□□□□ -0.19
VPS8-223ENST00000485024 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
VPS8-223ENST00000485024 TMEM92Q6UXU6 159 aa13.82□□□□□ -0.2
VPS8-223ENST00000485024 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
VPS8-223ENST00000485024 GPR153Q6NV75 609 aa13.79□□□□□ -0.2
VPS8-223ENST00000485024 PTGER2P43116 358 aa13.78□□□□□ -0.2
VPS8-223ENST00000485024 ZSWIM6Q9HCJ5 1215 aa13.78□□□□□ -0.2
VPS8-223ENST00000485024 ANKRD13DQ6ZTN6 518 aa13.72□□□□□ -0.21
VPS8-223ENST00000485024 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
VPS8-223ENST00000485024 EFCAB3Q8N7B9 438 aa13.71□□□□□ -0.21
VPS8-223ENST00000485024 ARSIQ5FYB1 569 aa13.65□□□□□ -0.22
VPS8-223ENST00000485024 LSM11P83369 360 aaKnown RBP eCLIP13.63□□□□□ -0.23
VPS8-223ENST00000485024 CIZ1Q9ULV3 898 aaPredicted RBP13.63□□□□□ -0.23
VPS8-223ENST00000485024 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.237e-7■■■■□ 23
VPS8-223ENST00000485024 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms