RNA–Protein interactions for RNA: ENST00000484840.5

GTF2I-209, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-209ENST00000484840 SPDYE4A6NLX3 237 aa13.86□□□□□ -0.19
GTF2I-209ENST00000484840 ATMINO43313 823 aaPredicted RBP13.86□□□□□ -0.19
GTF2I-209ENST00000484840 C7P10643 843 aa13.86□□□□□ -0.19
GTF2I-209ENST00000484840 MNX1P50219 401 aaPredicted RBP13.86□□□□□ -0.19
GTF2I-209ENST00000484840 SLC39A7Q92504 469 aa13.84□□□□□ -0.19
GTF2I-209ENST00000484840 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
GTF2I-209ENST00000484840 MAMSTRQ6ZN01 415 aa13.82□□□□□ -0.2
GTF2I-209ENST00000484840 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
GTF2I-209ENST00000484840 FKBP8Q14318 412 aa13.81□□□□□ -0.2
GTF2I-209ENST00000484840 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
GTF2I-209ENST00000484840 PROM2Q8N271 834 aa13.71□□□□□ -0.21
GTF2I-209ENST00000484840 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
GTF2I-209ENST00000484840 SCUBE2Q9NQ36 999 aa13.69□□□□□ -0.22
GTF2I-209ENST00000484840 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
GTF2I-209ENST00000484840 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
GTF2I-209ENST00000484840 TSPYL2Q9H2G4 693 aaPredicted RBP13.57□□□□□ -0.24
GTF2I-209ENST00000484840 CDAN1Q8IWY9 1227 aa13.55□□□□□ -0.24
GTF2I-209ENST00000484840 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
GTF2I-209ENST00000484840 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
GTF2I-209ENST00000484840 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
GTF2I-209ENST00000484840 COLQQ9Y215 455 aaPredicted RBP13.48□□□□□ -0.25
GTF2I-209ENST00000484840 TIE1P35590 1138 aa13.44□□□□□ -0.26
GTF2I-209ENST00000484840 MAP3K13O43283 966 aa13.42□□□□□ -0.26
GTF2I-209ENST00000484840 TTLL13PA6NNM8 815 aa13.37□□□□□ -0.27
GTF2I-209ENST00000484840 SEC24BO95487 1268 aa13.37□□□□□ -0.27
GTF2I-209ENST00000484840 ST18O60284 1047 aa13.35□□□□□ -0.27
GTF2I-209ENST00000484840 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
GTF2I-209ENST00000484840 MMRN1Q13201 1228 aa13.29□□□□□ -0.28
GTF2I-209ENST00000484840 IER5LQ5T953 404 aa13.29□□□□□ -0.28
GTF2I-209ENST00000484840 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
GTF2I-209ENST00000484840 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
GTF2I-209ENST00000484840 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
GTF2I-209ENST00000484840 SPNS2Q8IVW8 549 aa13.25□□□□□ -0.29
GTF2I-209ENST00000484840 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
GTF2I-209ENST00000484840 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
GTF2I-209ENST00000484840 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
GTF2I-209ENST00000484840 MIER1Q8N108 512 aa13.13□□□□□ -0.31
GTF2I-209ENST00000484840 TMEM121BQ9BXQ6 578 aaPredicted RBP13.12□□□□□ -0.31
GTF2I-209ENST00000484840 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
GTF2I-209ENST00000484840 PLCG2P16885 1265 aa13.09□□□□□ -0.31
GTF2I-209ENST00000484840 IFNL1Q8IU54 200 aa13.09□□□□□ -0.31
GTF2I-209ENST00000484840 IRX5P78411 483 aaPredicted RBP13.08□□□□□ -0.32
GTF2I-209ENST00000484840 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
GTF2I-209ENST00000484840 TMEM106CQ9BVX2 250 aa13.06□□□□□ -0.32
GTF2I-209ENST00000484840 MARVELD3Q96A59 401 aa13.05□□□□□ -0.32
GTF2I-209ENST00000484840 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
GTF2I-209ENST00000484840 SNPHO15079 494 aa13□□□□□ -0.33
GTF2I-209ENST00000484840 NUBP1P53384 320 aa13□□□□□ -0.33
GTF2I-209ENST00000484840 OCEL1Q9H607 264 aa12.98□□□□□ -0.33
GTF2I-209ENST00000484840 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
GTF2I-209ENST00000484840 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
GTF2I-209ENST00000484840 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
GTF2I-209ENST00000484840 KRTAP3-3Q9BYR6 98 aa12.9□□□□□ -0.34
GTF2I-209ENST00000484840 KRTAP3-2Q9BYR7 98 aa12.9□□□□□ -0.34
GTF2I-209ENST00000484840 POTEB3A0JP26 581 aa12.89□□□□□ -0.35
GTF2I-209ENST00000484840 POTEBQ6S5H4 581 aa12.89□□□□□ -0.35
GTF2I-209ENST00000484840 EMP3P54852 163 aa12.85□□□□□ -0.35
GTF2I-209ENST00000484840 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
GTF2I-209ENST00000484840 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
GTF2I-209ENST00000484840 HS3ST6Q96QI5 342 aa12.82□□□□□ -0.36
GTF2I-209ENST00000484840 FAM205CA6NFA0 338 aa12.77□□□□□ -0.37
GTF2I-209ENST00000484840 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
GTF2I-209ENST00000484840 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
GTF2I-209ENST00000484840 PYGBP11216 843 aa12.73□□□□□ -0.37
GTF2I-209ENST00000484840 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
GTF2I-209ENST00000484840 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
GTF2I-209ENST00000484840 GSE1Q14687 1217 aa12.67□□□□□ -0.38
GTF2I-209ENST00000484840 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
GTF2I-209ENST00000484840 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
GTF2I-209ENST00000484840 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
GTF2I-209ENST00000484840 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
GTF2I-209ENST00000484840 PKD2Q13563 968 aa12.57□□□□□ -0.4
GTF2I-209ENST00000484840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.45e-10■□□□□ 11.1
GTF2I-209ENST00000484840 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
GTF2I-209ENST00000484840 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
GTF2I-209ENST00000484840 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
GTF2I-209ENST00000484840 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
GTF2I-209ENST00000484840 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
GTF2I-209ENST00000484840 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
GTF2I-209ENST00000484840 HOXB1P14653 301 aaPredicted RBP12.51□□□□□ -0.41
GTF2I-209ENST00000484840 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
GTF2I-209ENST00000484840 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
GTF2I-209ENST00000484840 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
GTF2I-209ENST00000484840 ERBB3P21860 1342 aa12.46□□□□□ -0.41
GTF2I-209ENST00000484840 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
GTF2I-209ENST00000484840 PSEN1P49768 467 aa12.44□□□□□ -0.42
GTF2I-209ENST00000484840 MYT1LQ9UL68 1186 aa12.44□□□□□ -0.42
GTF2I-209ENST00000484840 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
GTF2I-209ENST00000484840 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
GTF2I-209ENST00000484840 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
GTF2I-209ENST00000484840 RNF25Q96BH1 459 aaPredicted RBP12.38□□□□□ -0.43
GTF2I-209ENST00000484840 DOK7Q18PE1 504 aa12.37□□□□□ -0.43
GTF2I-209ENST00000484840 RGL2O15211 777 aa12.35□□□□□ -0.43
GTF2I-209ENST00000484840 RIOK3O14730 519 aaKnown RBP12.33□□□□□ -0.44
GTF2I-209ENST00000484840 G3V3G9 751 aa12.32□□□□□ -0.44
GTF2I-209ENST00000484840 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
GTF2I-209ENST00000484840 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
GTF2I-209ENST00000484840 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
GTF2I-209ENST00000484840 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
GTF2I-209ENST00000484840 RIMBP2O15034 1052 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms