RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 C7P10643 843 aa9.23□□□□□ -0.93
ERCC8-206ENST00000484330 ASTLQ6HA08 431 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-206ENST00000484330 NPM1P06748 294 aaKnown RBP eCLIP9.22□□□□□ -0.93
ERCC8-206ENST00000484330 METRNQ9UJH8 293 aa9.22□□□□□ -0.93
ERCC8-206ENST00000484330 ATMINO43313 823 aaPredicted RBP9.21□□□□□ -0.94
ERCC8-206ENST00000484330 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
ERCC8-206ENST00000484330 SLC39A7Q92504 469 aa9.2□□□□□ -0.94
ERCC8-206ENST00000484330 PROM2Q8N271 834 aa9.18□□□□□ -0.94
ERCC8-206ENST00000484330 FBXO3Q9UK99 471 aa9.18□□□□□ -0.94
ERCC8-206ENST00000484330 LCE2DQ5TA82 110 aaPredicted RBP9.17□□□□□ -0.94
ERCC8-206ENST00000484330 FAM163AQ96GL9 167 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-206ENST00000484330 MS4A3Q96HJ5 214 aa9.16□□□□□ -0.94
ERCC8-206ENST00000484330 SCUBE2Q9NQ36 999 aa9.12□□□□□ -0.95
ERCC8-206ENST00000484330 CDAN1Q8IWY9 1227 aa9.09□□□□□ -0.95
ERCC8-206ENST00000484330 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-206ENST00000484330 POTEFA5A3E0 1075 aa9.05□□□□□ -0.96
ERCC8-206ENST00000484330 TSPYL2Q9H2G4 693 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-206ENST00000484330 CCDC61Q9Y6R9 512 aa9.02□□□□□ -0.97
ERCC8-206ENST00000484330 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
ERCC8-206ENST00000484330 BMP2KQ9NSY1 1161 aaPredicted RBP8.99□□□□□ -0.97
ERCC8-206ENST00000484330 MMRN1Q13201 1228 aa8.97□□□□□ -0.97
ERCC8-206ENST00000484330 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
ERCC8-206ENST00000484330 VASPP50552 380 aaPredicted RBP8.96□□□□□ -0.98
ERCC8-206ENST00000484330 TRPC6Q9Y210 931 aa8.96□□□□□ -0.98
ERCC8-206ENST00000484330 TIE1P35590 1138 aa8.94□□□□□ -0.98
ERCC8-206ENST00000484330 COLQQ9Y215 455 aaPredicted RBP8.93□□□□□ -0.98
ERCC8-206ENST00000484330 MAP3K13O43283 966 aa8.92□□□□□ -0.98
ERCC8-206ENST00000484330 MIER1Q8N108 512 aa8.91□□□□□ -0.98
ERCC8-206ENST00000484330 PLCD3Q8N3E9 789 aa8.91□□□□□ -0.98
ERCC8-206ENST00000484330 SEC24BO95487 1268 aa8.89□□□□□ -0.99
ERCC8-206ENST00000484330 TTLL13PA6NNM8 815 aa8.88□□□□□ -0.99
ERCC8-206ENST00000484330 ZBTB47Q9UFB7 747 aaPredicted RBP8.88□□□□□ -0.99
ERCC8-206ENST00000484330 SPNS2Q8IVW8 549 aa8.87□□□□□ -0.99
ERCC8-206ENST00000484330 ST18O60284 1047 aa8.85□□□□□ -0.99
ERCC8-206ENST00000484330 IER5LQ5T953 404 aa8.84□□□□□ -0.99
ERCC8-206ENST00000484330 KLHL34Q8N239 644 aa8.84□□□□□ -0.99
ERCC8-206ENST00000484330 RASEFQ8IZ41 740 aa8.82□□□□□ -1
ERCC8-206ENST00000484330 SLAIN1Q8ND83 568 aa8.82□□□□□ -1
ERCC8-206ENST00000484330 SGIP1Q9BQI5 828 aa8.81□□□□□ -1
ERCC8-206ENST00000484330 TRIM35Q9UPQ4 493 aa8.81□□□□□ -1
ERCC8-206ENST00000484330 AMER1Q5JTC6 1135 aaPredicted RBP8.8□□□□□ -1
ERCC8-206ENST00000484330 IFNLR1Q8IU57 520 aaPredicted RBP8.79□□□□□ -1
ERCC8-206ENST00000484330 SPOCK2Q92563 424 aa8.77□□□□□ -1.01
ERCC8-206ENST00000484330 TMEM121BQ9BXQ6 578 aaPredicted RBP8.74□□□□□ -1.01
ERCC8-206ENST00000484330 PCDHB13Q9Y5F0 798 aa8.74□□□□□ -1.01
ERCC8-206ENST00000484330 PLCG2P16885 1265 aa8.69□□□□□ -1.02
ERCC8-206ENST00000484330 IRX5P78411 483 aaPredicted RBP8.69□□□□□ -1.02
ERCC8-206ENST00000484330 IFNL1Q8IU54 200 aa8.69□□□□□ -1.02
ERCC8-206ENST00000484330 TMEM106CQ9BVX2 250 aa8.68□□□□□ -1.02
ERCC8-206ENST00000484330 SNPHO15079 494 aa8.67□□□□□ -1.02
ERCC8-206ENST00000484330 NUBP1P53384 320 aa8.66□□□□□ -1.02
ERCC8-206ENST00000484330 OCEL1Q9H607 264 aa8.65□□□□□ -1.02
ERCC8-206ENST00000484330 RTN4Q9NQC3 1192 aaKnown RBP8.64□□□□□ -1.03
ERCC8-206ENST00000484330 GSE1Q14687 1217 aa8.63□□□□□ -1.03
ERCC8-206ENST00000484330 MARVELD3Q96A59 401 aa8.63□□□□□ -1.03
ERCC8-206ENST00000484330 FAM212AQ96EL1 285 aa8.62□□□□□ -1.03
ERCC8-206ENST00000484330 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.61□□□□□ -1.03
ERCC8-206ENST00000484330 TRIM41Q8WV44 630 aa8.6□□□□□ -1.03
ERCC8-206ENST00000484330 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
ERCC8-206ENST00000484330 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
ERCC8-206ENST00000484330 ECM2O94769 699 aaPredicted RBP8.53□□□□□ -1.04
ERCC8-206ENST00000484330 KRTAP3-3Q9BYR6 98 aa8.53□□□□□ -1.04
ERCC8-206ENST00000484330 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
ERCC8-206ENST00000484330 POTEB3A0JP26 581 aa8.52□□□□□ -1.05
ERCC8-206ENST00000484330 EMP3P54852 163 aa8.52□□□□□ -1.05
ERCC8-206ENST00000484330 PKD2Q13563 968 aa8.52□□□□□ -1.05
ERCC8-206ENST00000484330 POTEBQ6S5H4 581 aa8.52□□□□□ -1.05
ERCC8-206ENST00000484330 HS3ST6Q96QI5 342 aa8.49□□□□□ -1.05
ERCC8-206ENST00000484330 FAM205CA6NFA0 338 aa8.47□□□□□ -1.05
ERCC8-206ENST00000484330 CHRM1P11229 460 aaPredicted RBP8.47□□□□□ -1.05
ERCC8-206ENST00000484330 PDCD7Q8N8D1 485 aaKnown RBP8.47□□□□□ -1.05
ERCC8-206ENST00000484330 L3MBTL3Q96JM7 780 aaPredicted RBP8.47□□□□□ -1.05
ERCC8-206ENST00000484330 PCDHB8Q9UN66 801 aa8.47□□□□□ -1.05
ERCC8-206ENST00000484330 PYGBP11216 843 aa8.46□□□□□ -1.06
ERCC8-206ENST00000484330 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.06
ERCC8-206ENST00000484330 C3orf67Q6ZVT6 689 aa8.44□□□□□ -1.06
ERCC8-206ENST00000484330 DCAF8L2P0C7V8 631 aa8.42□□□□□ -1.06
ERCC8-206ENST00000484330 MKRN3Q13064 507 aaKnown RBP8.39□□□□□ -1.07
ERCC8-206ENST00000484330 ZNF467Q7Z7K2 595 aaPredicted RBP8.39□□□□□ -1.07
ERCC8-206ENST00000484330 RIOK3O14730 519 aaKnown RBP8.38□□□□□ -1.07
ERCC8-206ENST00000484330 RGL2O15211 777 aa8.37□□□□□ -1.07
ERCC8-206ENST00000484330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.37□□□□□ -1.071e-6■■□□□ 11.9
ERCC8-206ENST00000484330 GOLGA2Q08379 1002 aa8.36□□□□□ -1.07
ERCC8-206ENST00000484330 RNF166Q96A37 237 aaPredicted RBP8.36□□□□□ -1.07
ERCC8-206ENST00000484330 VGFO15240 615 aaPredicted RBP8.35□□□□□ -1.07
ERCC8-206ENST00000484330 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
ERCC8-206ENST00000484330 HOXB3P14651 431 aaPredicted RBP8.33□□□□□ -1.08
ERCC8-206ENST00000484330 HOXB1P14653 301 aaPredicted RBP8.32□□□□□ -1.08
ERCC8-206ENST00000484330 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
ERCC8-206ENST00000484330 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
ERCC8-206ENST00000484330 PSEN1P49768 467 aa8.29□□□□□ -1.08
ERCC8-206ENST00000484330 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
ERCC8-206ENST00000484330 ERBB3P21860 1342 aa8.28□□□□□ -1.08
ERCC8-206ENST00000484330 CHGAP10645 457 aaKnown RBP8.27□□□□□ -1.09
ERCC8-206ENST00000484330 ZNF710Q8N1W2 664 aa8.27□□□□□ -1.09
ERCC8-206ENST00000484330 HS6ST3Q8IZP7 471 aa8.26□□□□□ -1.09
ERCC8-206ENST00000484330 BOLA1Q9Y3E2 137 aa8.26□□□□□ -1.09
ERCC8-206ENST00000484330 STK25O00506 426 aa8.25□□□□□ -1.09
ERCC8-206ENST00000484330 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.25□□□□□ -1.09
ERCC8-206ENST00000484330 MYT1LQ9UL68 1186 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms