RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
COL8A1-207ENST00000483969 DCBLD2Q96PD2 775 aa17.03■□□□□ 0.32
COL8A1-207ENST00000483969 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
COL8A1-207ENST00000483969 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
COL8A1-207ENST00000483969 PHF12Q96QT6 1004 aa16.98■□□□□ 0.31
COL8A1-207ENST00000483969 FKBP8Q14318 412 aa16.97■□□□□ 0.31
COL8A1-207ENST00000483969 GALR2O43603 387 aaPredicted RBP16.96■□□□□ 0.31
COL8A1-207ENST00000483969 LHX8Q68G74 356 aa16.94■□□□□ 0.3
COL8A1-207ENST00000483969 MIER1Q8N108 512 aa16.93■□□□□ 0.3
COL8A1-207ENST00000483969 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
COL8A1-207ENST00000483969 TSPYL2Q9H2G4 693 aaPredicted RBP16.84■□□□□ 0.29
COL8A1-207ENST00000483969 ZBTB47Q9UFB7 747 aaPredicted RBP16.81■□□□□ 0.28
COL8A1-207ENST00000483969 CCDC61Q9Y6R9 512 aa16.79■□□□□ 0.28
COL8A1-207ENST00000483969 MS4A3Q96HJ5 214 aa16.78■□□□□ 0.28
COL8A1-207ENST00000483969 RASEFQ8IZ41 740 aa16.72■□□□□ 0.27
COL8A1-207ENST00000483969 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
COL8A1-207ENST00000483969 KIF12Q96FN5 646 aa16.67■□□□□ 0.26
COL8A1-207ENST00000483969 EIF4G1Q04637 1599 aaKnown RBP16.66■□□□□ 0.26
COL8A1-207ENST00000483969 ASTLQ6HA08 431 aaPredicted RBP16.66■□□□□ 0.26
COL8A1-207ENST00000483969 ATMINO43313 823 aaPredicted RBP16.6■□□□□ 0.25
COL8A1-207ENST00000483969 NUBP1P53384 320 aa16.59■□□□□ 0.25
COL8A1-207ENST00000483969 CC2D2AQ9P2K1 1620 aa16.57■□□□□ 0.24
COL8A1-207ENST00000483969 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
COL8A1-207ENST00000483969 MAP3K13O43283 966 aa16.56■□□□□ 0.24
COL8A1-207ENST00000483969 SLC39A7Q92504 469 aa16.56■□□□□ 0.24
COL8A1-207ENST00000483969 FAM212AQ96EL1 285 aa16.56■□□□□ 0.24
COL8A1-207ENST00000483969 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
COL8A1-207ENST00000483969 METRNQ9UJH8 293 aa16.53■□□□□ 0.24
COL8A1-207ENST00000483969 C7P10643 843 aa16.52■□□□□ 0.24
COL8A1-207ENST00000483969 SGIP1Q9BQI5 828 aa16.51■□□□□ 0.23
COL8A1-207ENST00000483969 TIE1P35590 1138 aa16.5■□□□□ 0.23
COL8A1-207ENST00000483969 BMP2KQ9NSY1 1161 aaPredicted RBP16.48■□□□□ 0.23
COL8A1-207ENST00000483969 ATN1P54259 1190 aaPredicted RBP16.47■□□□□ 0.23
COL8A1-207ENST00000483969 VASPP50552 380 aaPredicted RBP16.45■□□□□ 0.22
COL8A1-207ENST00000483969 PCDHB13Q9Y5F0 798 aa16.45■□□□□ 0.22
COL8A1-207ENST00000483969 POTEB2H3BUK9 544 aa16.44■□□□□ 0.22
COL8A1-207ENST00000483969 TRPC6Q9Y210 931 aa16.44■□□□□ 0.22
COL8A1-207ENST00000483969 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
COL8A1-207ENST00000483969 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
COL8A1-207ENST00000483969 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
COL8A1-207ENST00000483969 TTLL13PA6NNM8 815 aa16.37■□□□□ 0.21
COL8A1-207ENST00000483969 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
COL8A1-207ENST00000483969 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
COL8A1-207ENST00000483969 DCAF8Q5TAQ9 597 aa16.34■□□□□ 0.21
COL8A1-207ENST00000483969 IFNL1Q8IU54 200 aa16.33■□□□□ 0.2
COL8A1-207ENST00000483969 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
COL8A1-207ENST00000483969 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
COL8A1-207ENST00000483969 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
COL8A1-207ENST00000483969 MAMSTRQ6ZN01 415 aa16.31■□□□□ 0.2
COL8A1-207ENST00000483969 IER5LQ5T953 404 aa16.27■□□□□ 0.2
COL8A1-207ENST00000483969 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
COL8A1-207ENST00000483969 GSE1Q14687 1217 aa16.25■□□□□ 0.19
COL8A1-207ENST00000483969 PYGBP11216 843 aa16.24■□□□□ 0.19
COL8A1-207ENST00000483969 POTEJP0CG39 1038 aa16.23■□□□□ 0.19
COL8A1-207ENST00000483969 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
COL8A1-207ENST00000483969 PEG3Q9GZU2 1588 aa16.22■□□□□ 0.19
COL8A1-207ENST00000483969 SEC24BO95487 1268 aa16.22■□□□□ 0.19
COL8A1-207ENST00000483969 TMEM106CQ9BVX2 250 aa16.22■□□□□ 0.19
COL8A1-207ENST00000483969 SCUBE2Q9NQ36 999 aa16.22■□□□□ 0.19
COL8A1-207ENST00000483969 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
COL8A1-207ENST00000483969 POTEFA5A3E0 1075 aa16.21■□□□□ 0.19
COL8A1-207ENST00000483969 HMGXB3Q12766 1538 aa16.2■□□□□ 0.18
COL8A1-207ENST00000483969 COLQQ9Y215 455 aaPredicted RBP16.15■□□□□ 0.18
COL8A1-207ENST00000483969 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
COL8A1-207ENST00000483969 SPOCK2Q92563 424 aa16.1■□□□□ 0.17
COL8A1-207ENST00000483969 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
COL8A1-207ENST00000483969 IFNLR1Q8IU57 520 aaPredicted RBP16.09■□□□□ 0.17
COL8A1-207ENST00000483969 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.16
COL8A1-207ENST00000483969 WIZO95785 1651 aa16.08■□□□□ 0.16
COL8A1-207ENST00000483969 PLCG2P16885 1265 aa16.06■□□□□ 0.16
COL8A1-207ENST00000483969 IRX5P78411 483 aaPredicted RBP16.01■□□□□ 0.15
COL8A1-207ENST00000483969 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
COL8A1-207ENST00000483969 OCEL1Q9H607 264 aa15.96■□□□□ 0.15
COL8A1-207ENST00000483969 CIZ1Q9ULV3 898 aaPredicted RBP15.96■□□□□ 0.15
COL8A1-207ENST00000483969 POTEMA6NI47 508 aa15.95■□□□□ 0.14
COL8A1-207ENST00000483969 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
COL8A1-207ENST00000483969 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
COL8A1-207ENST00000483969 GOLGA2Q08379 1002 aa15.92■□□□□ 0.14
COL8A1-207ENST00000483969 POTEGQ6S5H5 508 aa15.92■□□□□ 0.14
COL8A1-207ENST00000483969 PSEN1P49768 467 aa15.9■□□□□ 0.14
COL8A1-207ENST00000483969 NESP48681 1621 aa15.9■□□□□ 0.14
COL8A1-207ENST00000483969 PDAP1Q13442 181 aaKnown RBP15.89■□□□□ 0.13
COL8A1-207ENST00000483969 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
COL8A1-207ENST00000483969 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
COL8A1-207ENST00000483969 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
COL8A1-207ENST00000483969 MKRN3Q13064 507 aaKnown RBP15.87■□□□□ 0.13
COL8A1-207ENST00000483969 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
COL8A1-207ENST00000483969 SLAIN1Q8ND83 568 aa15.84■□□□□ 0.13
COL8A1-207ENST00000483969 FAM163AQ96GL9 167 aaPredicted RBP15.84■□□□□ 0.13
COL8A1-207ENST00000483969 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
COL8A1-207ENST00000483969 LCE2DQ5TA82 110 aaPredicted RBP15.83■□□□□ 0.12
COL8A1-207ENST00000483969 PDCD7Q8N8D1 485 aaKnown RBP15.8■□□□□ 0.12
COL8A1-207ENST00000483969 CFTRP13569 1480 aa15.79■□□□□ 0.12
COL8A1-207ENST00000483969 PCDH10Q9P2E7 1040 aa15.77■□□□□ 0.12
COL8A1-207ENST00000483969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL8A1-207ENST00000483969 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.75■□□□□ 0.11
COL8A1-207ENST00000483969 PLSCR2Q9NRY7 297 aa15.74■□□□□ 0.11
COL8A1-207ENST00000483969 L3MBTL3Q96JM7 780 aaPredicted RBP15.73■□□□□ 0.11
COL8A1-207ENST00000483969 CABP2Q9NPB3 220 aa15.71■□□□□ 0.11
COL8A1-207ENST00000483969 C3orf67Q6ZVT6 689 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms