RNA–Protein interactions for RNA: ENST00000483859.6

SENP6-208, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-208ENST00000483859 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
SENP6-208ENST00000483859 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
SENP6-208ENST00000483859 LCE2DQ5TA82 110 aaPredicted RBP12.3□□□□□ -0.44
SENP6-208ENST00000483859 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
SENP6-208ENST00000483859 FAM163AQ96GL9 167 aaPredicted RBP12.25□□□□□ -0.45
SENP6-208ENST00000483859 ATN1P54259 1190 aaPredicted RBP12.24□□□□□ -0.45
SENP6-208ENST00000483859 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
SENP6-208ENST00000483859 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
SENP6-208ENST00000483859 C7P10643 843 aa12.22□□□□□ -0.45
SENP6-208ENST00000483859 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
SENP6-208ENST00000483859 EHMT2Q96KQ7 1210 aa12.15□□□□□ -0.46
SENP6-208ENST00000483859 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
SENP6-208ENST00000483859 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
SENP6-208ENST00000483859 MAMSTRQ6ZN01 415 aa12.11□□□□□ -0.47
SENP6-208ENST00000483859 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
SENP6-208ENST00000483859 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
SENP6-208ENST00000483859 PCDH10Q9P2E7 1040 aa12.09□□□□□ -0.47
SENP6-208ENST00000483859 MAP3K13O43283 966 aa12.07□□□□□ -0.48
SENP6-208ENST00000483859 COLQQ9Y215 455 aaPredicted RBP12.06□□□□□ -0.48
SENP6-208ENST00000483859 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
SENP6-208ENST00000483859 TTLL13PA6NNM8 815 aa11.96□□□□□ -0.49
SENP6-208ENST00000483859 PROM2Q8N271 834 aa11.96□□□□□ -0.49
SENP6-208ENST00000483859 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
SENP6-208ENST00000483859 SEC24BO95487 1268 aa11.94□□□□□ -0.5
SENP6-208ENST00000483859 TIE1P35590 1138 aa11.94□□□□□ -0.5
SENP6-208ENST00000483859 MIER1Q8N108 512 aa11.91□□□□□ -0.5
SENP6-208ENST00000483859 TRIM35Q9UPQ4 493 aa11.9□□□□□ -0.5
SENP6-208ENST00000483859 ST18O60284 1047 aa11.85□□□□□ -0.51
SENP6-208ENST00000483859 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
SENP6-208ENST00000483859 PCDHB13Q9Y5F0 798 aa11.83□□□□□ -0.52
SENP6-208ENST00000483859 IFNL1Q8IU54 200 aa11.8□□□□□ -0.52
SENP6-208ENST00000483859 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
SENP6-208ENST00000483859 TMEM106CQ9BVX2 250 aa11.75□□□□□ -0.53
SENP6-208ENST00000483859 IER5LQ5T953 404 aa11.74□□□□□ -0.53
SENP6-208ENST00000483859 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
SENP6-208ENST00000483859 NUBP1P53384 320 aa11.73□□□□□ -0.53
SENP6-208ENST00000483859 PLCG2P16885 1265 aa11.68□□□□□ -0.54
SENP6-208ENST00000483859 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
SENP6-208ENST00000483859 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
SENP6-208ENST00000483859 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
SENP6-208ENST00000483859 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
SENP6-208ENST00000483859 MARVELD3Q96A59 401 aa11.67□□□□□ -0.54
SENP6-208ENST00000483859 PYGBP11216 843 aa11.59□□□□□ -0.55
SENP6-208ENST00000483859 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
SENP6-208ENST00000483859 PCDHB8Q9UN66 801 aa11.57□□□□□ -0.56
SENP6-208ENST00000483859 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
SENP6-208ENST00000483859 POTEB3A0JP26 581 aa11.52□□□□□ -0.57
SENP6-208ENST00000483859 POTEBQ6S5H4 581 aa11.52□□□□□ -0.57
SENP6-208ENST00000483859 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
SENP6-208ENST00000483859 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
SENP6-208ENST00000483859 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
SENP6-208ENST00000483859 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
SENP6-208ENST00000483859 SNPHO15079 494 aa11.45□□□□□ -0.58
SENP6-208ENST00000483859 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
SENP6-208ENST00000483859 EMP3P54852 163 aa11.44□□□□□ -0.58
SENP6-208ENST00000483859 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
SENP6-208ENST00000483859 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
SENP6-208ENST00000483859 FAM205CA6NFA0 338 aa11.42□□□□□ -0.58
SENP6-208ENST00000483859 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
SENP6-208ENST00000483859 C3orf67Q6ZVT6 689 aa11.37□□□□□ -0.59
SENP6-208ENST00000483859 FKBP8Q14318 412 aa11.36□□□□□ -0.59
SENP6-208ENST00000483859 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
SENP6-208ENST00000483859 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
SENP6-208ENST00000483859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.61e-7■■■□□ 17.9
SENP6-208ENST00000483859 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
SENP6-208ENST00000483859 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
SENP6-208ENST00000483859 PSEN1P49768 467 aa11.24□□□□□ -0.61
SENP6-208ENST00000483859 HOXB3P14651 431 aaPredicted RBP11.23□□□□□ -0.61
SENP6-208ENST00000483859 ZNF467Q7Z7K2 595 aaPredicted RBP11.22□□□□□ -0.61
SENP6-208ENST00000483859 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
SENP6-208ENST00000483859 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
SENP6-208ENST00000483859 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
SENP6-208ENST00000483859 GSE1Q14687 1217 aa11.15□□□□□ -0.62
SENP6-208ENST00000483859 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
SENP6-208ENST00000483859 ERBB3P21860 1342 aa11.12□□□□□ -0.63
SENP6-208ENST00000483859 HOXB1P14653 301 aaPredicted RBP11.11□□□□□ -0.63
SENP6-208ENST00000483859 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
SENP6-208ENST00000483859 CHRM1P11229 460 aaPredicted RBP11.1□□□□□ -0.63
SENP6-208ENST00000483859 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
SENP6-208ENST00000483859 VASPP50552 380 aaPredicted RBP11.09□□□□□ -0.63
SENP6-208ENST00000483859 PDAP1Q13442 181 aaKnown RBP11.08□□□□□ -0.64
SENP6-208ENST00000483859 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
SENP6-208ENST00000483859 G3V3G9 751 aa11.06□□□□□ -0.64
SENP6-208ENST00000483859 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
SENP6-208ENST00000483859 TMEM92Q6UXU6 159 aa11.02□□□□□ -0.65
SENP6-208ENST00000483859 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
SENP6-208ENST00000483859 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
SENP6-208ENST00000483859 CIZ1Q9ULV3 898 aaPredicted RBP11.01□□□□□ -0.65
SENP6-208ENST00000483859 EFCAB3Q8N7B9 438 aa10.98□□□□□ -0.65
SENP6-208ENST00000483859 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
SENP6-208ENST00000483859 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
SENP6-208ENST00000483859 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
SENP6-208ENST00000483859 KHSRPQ92945 711 aaKnown RBP eCLIP10.92□□□□□ -0.665e-7■■■□□ 15.3
SENP6-208ENST00000483859 MICALL2Q8IY33 904 aa10.91□□□□□ -0.66
SENP6-208ENST00000483859 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
SENP6-208ENST00000483859 ANKRD13DQ6ZTN6 518 aa10.9□□□□□ -0.66
SENP6-208ENST00000483859 ARSIQ5FYB1 569 aa10.88□□□□□ -0.67
SENP6-208ENST00000483859 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
SENP6-208ENST00000483859 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
SENP6-208ENST00000483859 ZSWIM6Q9HCJ5 1215 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms