RNA–Protein interactions for RNA: ENST00000483817.3

CBWD1-214, Transcript of COBW domain containing 1, humanhuman

TSL 3

Gene CBWD1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-214ENST00000483817 SLC39A7Q92504 469 aa14.94□□□□□ -0.02
CBWD1-214ENST00000483817 ATMINO43313 823 aaPredicted RBP14.9□□□□□ -0.02
CBWD1-214ENST00000483817 FAM163AQ96GL9 167 aaPredicted RBP14.87□□□□□ -0.03
CBWD1-214ENST00000483817 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
CBWD1-214ENST00000483817 MS4A3Q96HJ5 214 aa14.86□□□□□ -0.03
CBWD1-214ENST00000483817 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
CBWD1-214ENST00000483817 SCUBE2Q9NQ36 999 aa14.8□□□□□ -0.04
CBWD1-214ENST00000483817 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
CBWD1-214ENST00000483817 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
CBWD1-214ENST00000483817 ATN1P54259 1190 aaPredicted RBP14.7□□□□□ -0.06
CBWD1-214ENST00000483817 POTEFA5A3E0 1075 aa14.66□□□□□ -0.06
CBWD1-214ENST00000483817 CDAN1Q8IWY9 1227 aa14.63□□□□□ -0.07
CBWD1-214ENST00000483817 SPDYE4A6NLX3 237 aa14.61□□□□□ -0.07
CBWD1-214ENST00000483817 BMP2KQ9NSY1 1161 aaPredicted RBP14.56□□□□□ -0.08
CBWD1-214ENST00000483817 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
CBWD1-214ENST00000483817 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
CBWD1-214ENST00000483817 KIF12Q96FN5 646 aa14.53□□□□□ -0.08
CBWD1-214ENST00000483817 TRPC6Q9Y210 931 aa14.49□□□□□ -0.09
CBWD1-214ENST00000483817 TIE1P35590 1138 aa14.47□□□□□ -0.09
CBWD1-214ENST00000483817 COLQQ9Y215 455 aaPredicted RBP14.46□□□□□ -0.09
CBWD1-214ENST00000483817 SEC24BO95487 1268 aa14.4□□□□□ -0.1
CBWD1-214ENST00000483817 ST18O60284 1047 aa14.39□□□□□ -0.11
CBWD1-214ENST00000483817 MAP3K13O43283 966 aa14.38□□□□□ -0.11
CBWD1-214ENST00000483817 TTLL13PA6NNM8 815 aa14.36□□□□□ -0.11
CBWD1-214ENST00000483817 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
CBWD1-214ENST00000483817 IER5LQ5T953 404 aa14.32□□□□□ -0.12
CBWD1-214ENST00000483817 SPNS2Q8IVW8 549 aa14.31□□□□□ -0.12
CBWD1-214ENST00000483817 SLAIN1Q8ND83 568 aa14.3□□□□□ -0.12
CBWD1-214ENST00000483817 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
CBWD1-214ENST00000483817 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
CBWD1-214ENST00000483817 PROM2Q8N271 834 aa14.19□□□□□ -0.14
CBWD1-214ENST00000483817 TMEM121BQ9BXQ6 578 aaPredicted RBP14.19□□□□□ -0.14
CBWD1-214ENST00000483817 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
CBWD1-214ENST00000483817 PCDHB13Q9Y5F0 798 aa14.11□□□□□ -0.15
CBWD1-214ENST00000483817 PLCG2P16885 1265 aa14.08□□□□□ -0.16
CBWD1-214ENST00000483817 PLEKHG5O94827 1062 aa14.07□□□□□ -0.16
CBWD1-214ENST00000483817 SNPHO15079 494 aa14.05□□□□□ -0.16
CBWD1-214ENST00000483817 IRX5P78411 483 aaPredicted RBP14.05□□□□□ -0.16
CBWD1-214ENST00000483817 MIER1Q8N108 512 aa14.03□□□□□ -0.16
CBWD1-214ENST00000483817 MARVELD3Q96A59 401 aa14.03□□□□□ -0.16
CBWD1-214ENST00000483817 IFNL1Q8IU54 200 aa14.02□□□□□ -0.17
CBWD1-214ENST00000483817 TMEM106CQ9BVX2 250 aa14.02□□□□□ -0.17
CBWD1-214ENST00000483817 OCEL1Q9H607 264 aa13.94□□□□□ -0.18
CBWD1-214ENST00000483817 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
CBWD1-214ENST00000483817 NUBP1P53384 320 aa13.89□□□□□ -0.19
CBWD1-214ENST00000483817 KRTAP3-3Q9BYR6 98 aa13.89□□□□□ -0.19
CBWD1-214ENST00000483817 KRTAP3-2Q9BYR7 98 aa13.89□□□□□ -0.19
CBWD1-214ENST00000483817 EMP3P54852 163 aa13.86□□□□□ -0.19
CBWD1-214ENST00000483817 POTEB3A0JP26 581 aa13.83□□□□□ -0.2
CBWD1-214ENST00000483817 POTEBQ6S5H4 581 aa13.83□□□□□ -0.2
CBWD1-214ENST00000483817 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
CBWD1-214ENST00000483817 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
CBWD1-214ENST00000483817 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
CBWD1-214ENST00000483817 FAM212AQ96EL1 285 aa13.77□□□□□ -0.21
CBWD1-214ENST00000483817 FAM205CA6NFA0 338 aa13.75□□□□□ -0.21
CBWD1-214ENST00000483817 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
CBWD1-214ENST00000483817 PDCD7Q8N8D1 485 aaKnown RBP13.7□□□□□ -0.22
CBWD1-214ENST00000483817 L3MBTL3Q96JM7 780 aaPredicted RBP13.64□□□□□ -0.23
CBWD1-214ENST00000483817 PCDHB8Q9UN66 801 aa13.62□□□□□ -0.23
CBWD1-214ENST00000483817 PYGBP11216 843 aa13.6□□□□□ -0.23
CBWD1-214ENST00000483817 RNF166Q96A37 237 aaPredicted RBP13.55□□□□□ -0.24
CBWD1-214ENST00000483817 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
CBWD1-214ENST00000483817 MKRN3Q13064 507 aaKnown RBP13.52□□□□□ -0.25
CBWD1-214ENST00000483817 HOXB3P14651 431 aaPredicted RBP13.49□□□□□ -0.25
CBWD1-214ENST00000483817 GOLGA2Q08379 1002 aa13.48□□□□□ -0.25
CBWD1-214ENST00000483817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
CBWD1-214ENST00000483817 HOXB1P14653 301 aaPredicted RBP13.47□□□□□ -0.25
CBWD1-214ENST00000483817 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
CBWD1-214ENST00000483817 MYT1LQ9UL68 1186 aa13.42□□□□□ -0.26
CBWD1-214ENST00000483817 ERBB3P21860 1342 aa13.41□□□□□ -0.26
CBWD1-214ENST00000483817 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
CBWD1-214ENST00000483817 FKBP8Q14318 412 aa13.4□□□□□ -0.26
CBWD1-214ENST00000483817 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
CBWD1-214ENST00000483817 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
CBWD1-214ENST00000483817 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
CBWD1-214ENST00000483817 PSEN1P49768 467 aa13.32□□□□□ -0.28
CBWD1-214ENST00000483817 VARS2Q5ST30 1063 aaKnown RBP13.31□□□□□ -0.28
CBWD1-214ENST00000483817 BOLA1Q9Y3E2 137 aa13.31□□□□□ -0.28
CBWD1-214ENST00000483817 G3V3G9 751 aa13.27□□□□□ -0.29
CBWD1-214ENST00000483817 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
CBWD1-214ENST00000483817 PTGER2P43116 358 aa13.27□□□□□ -0.29
CBWD1-214ENST00000483817 ZNF687Q8N1G0 1237 aa13.26□□□□□ -0.29
CBWD1-214ENST00000483817 GSE1Q14687 1217 aa13.25□□□□□ -0.29
CBWD1-214ENST00000483817 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
CBWD1-214ENST00000483817 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
CBWD1-214ENST00000483817 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
CBWD1-214ENST00000483817 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
CBWD1-214ENST00000483817 GPR153Q6NV75 609 aa13.11□□□□□ -0.31
CBWD1-214ENST00000483817 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
CBWD1-214ENST00000483817 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
CBWD1-214ENST00000483817 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
CBWD1-214ENST00000483817 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
CBWD1-214ENST00000483817 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
CBWD1-214ENST00000483817 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
CBWD1-214ENST00000483817 MICALL2Q8IY33 904 aa12.96□□□□□ -0.33
CBWD1-214ENST00000483817 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
CBWD1-214ENST00000483817 ARSIQ5FYB1 569 aa12.94□□□□□ -0.34
CBWD1-214ENST00000483817 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
CBWD1-214ENST00000483817 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
CBWD1-214ENST00000483817 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms