RNA–Protein interactions for RNA: ENST00000483358.5

NUB1-209, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 2

Gene NUB1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-209ENST00000483358 ASTLQ6HA08 431 aaPredicted RBP13.88□□□□□ -0.19
NUB1-209ENST00000483358 MNX1P50219 401 aaPredicted RBP13.87□□□□□ -0.19
NUB1-209ENST00000483358 ATMINO43313 823 aaPredicted RBP13.84□□□□□ -0.19
NUB1-209ENST00000483358 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
NUB1-209ENST00000483358 LCE2DQ5TA82 110 aaPredicted RBP13.84□□□□□ -0.19
NUB1-209ENST00000483358 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
NUB1-209ENST00000483358 C7P10643 843 aa13.83□□□□□ -0.2
NUB1-209ENST00000483358 SLC39A7Q92504 469 aa13.82□□□□□ -0.2
NUB1-209ENST00000483358 MAMSTRQ6ZN01 415 aa13.77□□□□□ -0.21
NUB1-209ENST00000483358 FAM163AQ96GL9 167 aaPredicted RBP13.77□□□□□ -0.21
NUB1-209ENST00000483358 PROM2Q8N271 834 aa13.72□□□□□ -0.21
NUB1-209ENST00000483358 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
NUB1-209ENST00000483358 SCUBE2Q9NQ36 999 aa13.67□□□□□ -0.22
NUB1-209ENST00000483358 POTEFA5A3E0 1075 aa13.64□□□□□ -0.23
NUB1-209ENST00000483358 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
NUB1-209ENST00000483358 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
NUB1-209ENST00000483358 TRPC6Q9Y210 931 aa13.57□□□□□ -0.24
NUB1-209ENST00000483358 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
NUB1-209ENST00000483358 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
NUB1-209ENST00000483358 CDAN1Q8IWY9 1227 aa13.5□□□□□ -0.25
NUB1-209ENST00000483358 COLQQ9Y215 455 aaPredicted RBP13.48□□□□□ -0.25
NUB1-209ENST00000483358 MAP3K13O43283 966 aa13.45□□□□□ -0.26
NUB1-209ENST00000483358 TIE1P35590 1138 aa13.44□□□□□ -0.26
NUB1-209ENST00000483358 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
NUB1-209ENST00000483358 SEC24BO95487 1268 aa13.4□□□□□ -0.26
NUB1-209ENST00000483358 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
NUB1-209ENST00000483358 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
NUB1-209ENST00000483358 ST18O60284 1047 aa13.33□□□□□ -0.28
NUB1-209ENST00000483358 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
NUB1-209ENST00000483358 VASPP50552 380 aaPredicted RBP13.29□□□□□ -0.28
NUB1-209ENST00000483358 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
NUB1-209ENST00000483358 IER5LQ5T953 404 aa13.27□□□□□ -0.29
NUB1-209ENST00000483358 MIER1Q8N108 512 aa13.25□□□□□ -0.29
NUB1-209ENST00000483358 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
NUB1-209ENST00000483358 MMRN1Q13201 1228 aa13.22□□□□□ -0.29
NUB1-209ENST00000483358 PLCD3Q8N3E9 789 aa13.22□□□□□ -0.29
NUB1-209ENST00000483358 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
NUB1-209ENST00000483358 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
NUB1-209ENST00000483358 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
NUB1-209ENST00000483358 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
NUB1-209ENST00000483358 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
NUB1-209ENST00000483358 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
NUB1-209ENST00000483358 PLCG2P16885 1265 aa13.1□□□□□ -0.31
NUB1-209ENST00000483358 TMEM106CQ9BVX2 250 aa13.1□□□□□ -0.31
NUB1-209ENST00000483358 IRX5P78411 483 aaPredicted RBP13.09□□□□□ -0.31
NUB1-209ENST00000483358 KLHL34Q8N239 644 aa13.07□□□□□ -0.32
NUB1-209ENST00000483358 TMEM121BQ9BXQ6 578 aaPredicted RBP13.07□□□□□ -0.32
NUB1-209ENST00000483358 NUBP1P53384 320 aa13.05□□□□□ -0.32
NUB1-209ENST00000483358 MARVELD3Q96A59 401 aa13.05□□□□□ -0.32
NUB1-209ENST00000483358 SNPHO15079 494 aa12.98□□□□□ -0.33
NUB1-209ENST00000483358 OCEL1Q9H607 264 aa12.98□□□□□ -0.33
NUB1-209ENST00000483358 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
NUB1-209ENST00000483358 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
NUB1-209ENST00000483358 FAM212AQ96EL1 285 aa12.91□□□□□ -0.34
NUB1-209ENST00000483358 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
NUB1-209ENST00000483358 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
NUB1-209ENST00000483358 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
NUB1-209ENST00000483358 KRTAP3-2Q9BYR7 98 aa12.86□□□□□ -0.35
NUB1-209ENST00000483358 EMP3P54852 163 aa12.85□□□□□ -0.35
NUB1-209ENST00000483358 PYGBP11216 843 aa12.82□□□□□ -0.36
NUB1-209ENST00000483358 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
NUB1-209ENST00000483358 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
NUB1-209ENST00000483358 FAM205CA6NFA0 338 aa12.79□□□□□ -0.36
NUB1-209ENST00000483358 PDCD7Q8N8D1 485 aaKnown RBP12.79□□□□□ -0.36
NUB1-209ENST00000483358 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
NUB1-209ENST00000483358 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
NUB1-209ENST00000483358 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
NUB1-209ENST00000483358 GSE1Q14687 1217 aa12.74□□□□□ -0.37
NUB1-209ENST00000483358 L3MBTL3Q96JM7 780 aaPredicted RBP12.69□□□□□ -0.38
NUB1-209ENST00000483358 PKD2Q13563 968 aa12.66□□□□□ -0.38
NUB1-209ENST00000483358 RTN4Q9NQC3 1192 aaKnown RBP12.66□□□□□ -0.38
NUB1-209ENST00000483358 MKRN3Q13064 507 aaKnown RBP12.64□□□□□ -0.39
NUB1-209ENST00000483358 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
NUB1-209ENST00000483358 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
NUB1-209ENST00000483358 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
NUB1-209ENST00000483358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.395e-7■■□□□ 12.8
NUB1-209ENST00000483358 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
NUB1-209ENST00000483358 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
NUB1-209ENST00000483358 HOXB3P14651 431 aaPredicted RBP12.56□□□□□ -0.4
NUB1-209ENST00000483358 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
NUB1-209ENST00000483358 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
NUB1-209ENST00000483358 ILDR1Q86SU0 546 aaPredicted RBP12.53□□□□□ -0.4
NUB1-209ENST00000483358 RNF166Q96A37 237 aaPredicted RBP12.51□□□□□ -0.41
NUB1-209ENST00000483358 HOXB1P14653 301 aaPredicted RBP12.5□□□□□ -0.41
NUB1-209ENST00000483358 PSEN1P49768 467 aa12.5□□□□□ -0.41
NUB1-209ENST00000483358 ERBB3P21860 1342 aa12.48□□□□□ -0.41
NUB1-209ENST00000483358 RGL2O15211 777 aa12.47□□□□□ -0.41
NUB1-209ENST00000483358 RNF25Q96BH1 459 aaPredicted RBP12.47□□□□□ -0.41
NUB1-209ENST00000483358 ZNF710Q8N1W2 664 aa12.46□□□□□ -0.41
NUB1-209ENST00000483358 BOLA1Q9Y3E2 137 aa12.44□□□□□ -0.42
NUB1-209ENST00000483358 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
NUB1-209ENST00000483358 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
NUB1-209ENST00000483358 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
NUB1-209ENST00000483358 G3V3G9 751 aa12.39□□□□□ -0.43
NUB1-209ENST00000483358 DOK7Q18PE1 504 aa12.39□□□□□ -0.43
NUB1-209ENST00000483358 CABP2Q9NPB3 220 aa12.37□□□□□ -0.43
NUB1-209ENST00000483358 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
NUB1-209ENST00000483358 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
NUB1-209ENST00000483358 VGFO15240 615 aaPredicted RBP12.33□□□□□ -0.44
NUB1-209ENST00000483358 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms