RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 PLCD3Q8N3E9 789 aa15.48■□□□□ 0.07
PMS1-219ENST00000483293 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
PMS1-219ENST00000483293 PCDH10Q9P2E7 1040 aa15.4■□□□□ 0.06
PMS1-219ENST00000483293 PELP1Q8IZL8 1130 aaKnown RBP15.38■□□□□ 0.05
PMS1-219ENST00000483293 CREBZFQ9NS37 354 aa15.38■□□□□ 0.05
PMS1-219ENST00000483293 PHF12Q96QT6 1004 aa15.31■□□□□ 0.04
PMS1-219ENST00000483293 POTEJP0CG39 1038 aa15.29■□□□□ 0.04
PMS1-219ENST00000483293 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
PMS1-219ENST00000483293 LCE2DQ5TA82 110 aaPredicted RBP15.28■□□□□ 0.04
PMS1-219ENST00000483293 SPOCK2Q92563 424 aa15.24■□□□□ 0.03
PMS1-219ENST00000483293 METRNQ9UJH8 293 aa15.2■□□□□ 0.02
PMS1-219ENST00000483293 ASTLQ6HA08 431 aaPredicted RBP15.16■□□□□ 0.02
PMS1-219ENST00000483293 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
PMS1-219ENST00000483293 ZBTB47Q9UFB7 747 aaPredicted RBP15.13■□□□□ 0.01
PMS1-219ENST00000483293 ATMINO43313 823 aaPredicted RBP15.11■□□□□ 0.01
PMS1-219ENST00000483293 C7P10643 843 aa15.11■□□□□ 0.01
PMS1-219ENST00000483293 SLC39A7Q92504 469 aa15.11■□□□□ 0.01
PMS1-219ENST00000483293 FAM163AQ96GL9 167 aaPredicted RBP15.1■□□□□ 0.01
PMS1-219ENST00000483293 MAMSTRQ6ZN01 415 aa15.09■□□□□ 0.01
PMS1-219ENST00000483293 MS4A3Q96HJ5 214 aa15.08■□□□□ 0
PMS1-219ENST00000483293 PKD2Q13563 968 aa15.07■□□□□ 0
PMS1-219ENST00000483293 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
PMS1-219ENST00000483293 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
PMS1-219ENST00000483293 DCAF8L2P0C7V8 631 aa15□□□□□ -0.01
PMS1-219ENST00000483293 ECM2O94769 699 aaPredicted RBP14.98□□□□□ -0.01
PMS1-219ENST00000483293 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
PMS1-219ENST00000483293 NUBP1P53384 320 aa14.97□□□□□ -0.01
PMS1-219ENST00000483293 DCAF8Q5TAQ9 597 aa14.96□□□□□ -0.01
PMS1-219ENST00000483293 SCUBE2Q9NQ36 999 aa14.96□□□□□ -0.01
PMS1-219ENST00000483293 POTEFA5A3E0 1075 aa14.92□□□□□ -0.02
PMS1-219ENST00000483293 ATN1P54259 1190 aaPredicted RBP14.91□□□□□ -0.02
PMS1-219ENST00000483293 RASEFQ8IZ41 740 aa14.89□□□□□ -0.03
PMS1-219ENST00000483293 CDAN1Q8IWY9 1227 aa14.86□□□□□ -0.03
PMS1-219ENST00000483293 GSE1Q14687 1217 aa14.85□□□□□ -0.03
PMS1-219ENST00000483293 FAM212AQ96EL1 285 aa14.83□□□□□ -0.04
PMS1-219ENST00000483293 RGL2O15211 777 aa14.82□□□□□ -0.04
PMS1-219ENST00000483293 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
PMS1-219ENST00000483293 BMP2KQ9NSY1 1161 aaPredicted RBP14.76□□□□□ -0.05
PMS1-219ENST00000483293 TRPC6Q9Y210 931 aa14.74□□□□□ -0.05
PMS1-219ENST00000483293 CCDC61Q9Y6R9 512 aa14.74□□□□□ -0.05
PMS1-219ENST00000483293 PYGBP11216 843 aa14.72□□□□□ -0.05
PMS1-219ENST00000483293 KIF12Q96FN5 646 aa14.71□□□□□ -0.05
PMS1-219ENST00000483293 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
PMS1-219ENST00000483293 COLQQ9Y215 455 aaPredicted RBP14.69□□□□□ -0.06
PMS1-219ENST00000483293 RNF25Q96BH1 459 aaPredicted RBP14.64□□□□□ -0.07
PMS1-219ENST00000483293 TIE1P35590 1138 aa14.61□□□□□ -0.07
PMS1-219ENST00000483293 ST18O60284 1047 aa14.6□□□□□ -0.07
PMS1-219ENST00000483293 MMRN1Q13201 1228 aa14.6□□□□□ -0.07
PMS1-219ENST00000483293 CHGAP10645 457 aaKnown RBP14.58□□□□□ -0.08
PMS1-219ENST00000483293 RIOK3O14730 519 aaKnown RBP14.56□□□□□ -0.08
PMS1-219ENST00000483293 MAP3K13O43283 966 aa14.56□□□□□ -0.08
PMS1-219ENST00000483293 CHRM1P11229 460 aaPredicted RBP14.56□□□□□ -0.08
PMS1-219ENST00000483293 SEC24BO95487 1268 aa14.55□□□□□ -0.08
PMS1-219ENST00000483293 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
PMS1-219ENST00000483293 SPNS2Q8IVW8 549 aa14.54□□□□□ -0.08
PMS1-219ENST00000483293 SLC24A1O60721 1099 aa14.5□□□□□ -0.09
PMS1-219ENST00000483293 SLAIN1Q8ND83 568 aa14.5□□□□□ -0.09
PMS1-219ENST00000483293 PCDHB8Q9UN66 801 aa14.49□□□□□ -0.09
PMS1-219ENST00000483293 PCDHB13Q9Y5F0 798 aa14.49□□□□□ -0.09
PMS1-219ENST00000483293 VGFO15240 615 aaPredicted RBP14.45□□□□□ -0.1
PMS1-219ENST00000483293 IER5LQ5T953 404 aa14.45□□□□□ -0.1
PMS1-219ENST00000483293 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
PMS1-219ENST00000483293 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
PMS1-219ENST00000483293 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.43□□□□□ -0.1
PMS1-219ENST00000483293 STK25O00506 426 aa14.43□□□□□ -0.1
PMS1-219ENST00000483293 ZFP91Q96JP5 570 aaPredicted RBP14.43□□□□□ -0.1
PMS1-219ENST00000483293 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
PMS1-219ENST00000483293 PLCB2Q00722 1185 aa14.42□□□□□ -0.1
PMS1-219ENST00000483293 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
PMS1-219ENST00000483293 CFAP44Q96MT7 982 aa14.41□□□□□ -0.1
PMS1-219ENST00000483293 PAXIP1Q6ZW49 1069 aaPredicted RBP14.4□□□□□ -0.1
PMS1-219ENST00000483293 ZNF467Q7Z7K2 595 aaPredicted RBP14.39□□□□□ -0.11
PMS1-219ENST00000483293 HS6ST3Q8IZP7 471 aa14.39□□□□□ -0.11
PMS1-219ENST00000483293 IFNL1Q8IU54 200 aa14.38□□□□□ -0.11
PMS1-219ENST00000483293 STK24Q9Y6E0 443 aa14.38□□□□□ -0.11
PMS1-219ENST00000483293 BCL11BQ9C0K0 894 aaPredicted RBP14.37□□□□□ -0.11
PMS1-219ENST00000483293 HAP1P54257 671 aaPredicted RBP14.33□□□□□ -0.12
PMS1-219ENST00000483293 TMEM121BQ9BXQ6 578 aaPredicted RBP14.33□□□□□ -0.12
PMS1-219ENST00000483293 PSEN1P49768 467 aa14.32□□□□□ -0.12
PMS1-219ENST00000483293 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
PMS1-219ENST00000483293 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
PMS1-219ENST00000483293 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
PMS1-219ENST00000483293 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
PMS1-219ENST00000483293 MARVELD3Q96A59 401 aa14.26□□□□□ -0.13
PMS1-219ENST00000483293 PLCG2P16885 1265 aa14.23□□□□□ -0.13
PMS1-219ENST00000483293 IRX5P78411 483 aaPredicted RBP14.22□□□□□ -0.13
PMS1-219ENST00000483293 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
PMS1-219ENST00000483293 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
PMS1-219ENST00000483293 CABP2Q9NPB3 220 aa14.17□□□□□ -0.14
PMS1-219ENST00000483293 SNPHO15079 494 aa14.16□□□□□ -0.14
PMS1-219ENST00000483293 GTPBP6O43824 516 aaPredicted RBP14.14□□□□□ -0.15
PMS1-219ENST00000483293 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
PMS1-219ENST00000483293 KRTAP3-3Q9BYR6 98 aa14.13□□□□□ -0.15
PMS1-219ENST00000483293 KRTAP3-2Q9BYR7 98 aa14.13□□□□□ -0.15
PMS1-219ENST00000483293 EFCAB3Q8N7B9 438 aa14.12□□□□□ -0.15
PMS1-219ENST00000483293 POTEB3A0JP26 581 aa14.09□□□□□ -0.15
PMS1-219ENST00000483293 POTEBQ6S5H4 581 aa14.09□□□□□ -0.15
PMS1-219ENST00000483293 OCEL1Q9H607 264 aa14.08□□□□□ -0.16
PMS1-219ENST00000483293 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.08□□□□□ -0.16
PMS1-219ENST00000483293 GOLGA2Q08379 1002 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms