RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
SNX27-205ENST00000482791 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
SNX27-205ENST00000482791 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
SNX27-205ENST00000482791 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
SNX27-205ENST00000482791 C7P10643 843 aa11.41□□□□□ -0.58
SNX27-205ENST00000482791 SLC39A7Q92504 469 aa11.4□□□□□ -0.58
SNX27-205ENST00000482791 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
SNX27-205ENST00000482791 ATN1P54259 1190 aaPredicted RBP11.39□□□□□ -0.59
SNX27-205ENST00000482791 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
SNX27-205ENST00000482791 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
SNX27-205ENST00000482791 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
SNX27-205ENST00000482791 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
SNX27-205ENST00000482791 CCDC61Q9Y6R9 512 aa11.31□□□□□ -0.6
SNX27-205ENST00000482791 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
SNX27-205ENST00000482791 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
SNX27-205ENST00000482791 KIF12Q96FN5 646 aa11.28□□□□□ -0.6
SNX27-205ENST00000482791 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
SNX27-205ENST00000482791 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
SNX27-205ENST00000482791 MAP3K13O43283 966 aa11.19□□□□□ -0.62
SNX27-205ENST00000482791 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
SNX27-205ENST00000482791 PROM2Q8N271 834 aa11.15□□□□□ -0.62
SNX27-205ENST00000482791 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
SNX27-205ENST00000482791 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
SNX27-205ENST00000482791 TIE1P35590 1138 aa11.11□□□□□ -0.63
SNX27-205ENST00000482791 ST18O60284 1047 aa11.06□□□□□ -0.64
SNX27-205ENST00000482791 SEC24BO95487 1268 aa11.03□□□□□ -0.64
SNX27-205ENST00000482791 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
SNX27-205ENST00000482791 SLAIN1Q8ND83 568 aa10.98□□□□□ -0.65
SNX27-205ENST00000482791 MMRN1Q13201 1228 aa10.96□□□□□ -0.65
SNX27-205ENST00000482791 IER5LQ5T953 404 aa10.95□□□□□ -0.66
SNX27-205ENST00000482791 IFNL1Q8IU54 200 aa10.94□□□□□ -0.66
SNX27-205ENST00000482791 SPNS2Q8IVW8 549 aa10.94□□□□□ -0.66
SNX27-205ENST00000482791 MIER1Q8N108 512 aa10.94□□□□□ -0.66
SNX27-205ENST00000482791 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
SNX27-205ENST00000482791 NUBP1P53384 320 aa10.89□□□□□ -0.67
SNX27-205ENST00000482791 IRX5P78411 483 aaPredicted RBP10.89□□□□□ -0.67
SNX27-205ENST00000482791 SGIP1Q9BQI5 828 aa10.87□□□□□ -0.67
SNX27-205ENST00000482791 TMEM106CQ9BVX2 250 aa10.86□□□□□ -0.67
SNX27-205ENST00000482791 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
SNX27-205ENST00000482791 PLCG2P16885 1265 aa10.81□□□□□ -0.68
SNX27-205ENST00000482791 POTEB3A0JP26 581 aa10.79□□□□□ -0.68
SNX27-205ENST00000482791 POTEBQ6S5H4 581 aa10.79□□□□□ -0.68
SNX27-205ENST00000482791 TMEM121BQ9BXQ6 578 aaPredicted RBP10.75□□□□□ -0.69
SNX27-205ENST00000482791 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
SNX27-205ENST00000482791 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
SNX27-205ENST00000482791 OCEL1Q9H607 264 aa10.74□□□□□ -0.69
SNX27-205ENST00000482791 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
SNX27-205ENST00000482791 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
SNX27-205ENST00000482791 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
SNX27-205ENST00000482791 PDCD7Q8N8D1 485 aaKnown RBP10.67□□□□□ -0.7
SNX27-205ENST00000482791 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
SNX27-205ENST00000482791 PYGBP11216 843 aa10.65□□□□□ -0.7
SNX27-205ENST00000482791 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
SNX27-205ENST00000482791 SNPHO15079 494 aa10.63□□□□□ -0.71
SNX27-205ENST00000482791 EMP3P54852 163 aa10.61□□□□□ -0.71
SNX27-205ENST00000482791 HS3ST6Q96QI5 342 aa10.61□□□□□ -0.71
SNX27-205ENST00000482791 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
SNX27-205ENST00000482791 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
SNX27-205ENST00000482791 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
SNX27-205ENST00000482791 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
SNX27-205ENST00000482791 FKBP8Q14318 412 aa10.49□□□□□ -0.73
SNX27-205ENST00000482791 C3orf67Q6ZVT6 689 aa10.49□□□□□ -0.73
SNX27-205ENST00000482791 HOXB3P14651 431 aaPredicted RBP10.48□□□□□ -0.73
SNX27-205ENST00000482791 ILDR1Q86SU0 546 aaPredicted RBP10.47□□□□□ -0.73
SNX27-205ENST00000482791 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
SNX27-205ENST00000482791 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
SNX27-205ENST00000482791 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
SNX27-205ENST00000482791 PSEN1P49768 467 aa10.38□□□□□ -0.75
SNX27-205ENST00000482791 HOXB1P14653 301 aaPredicted RBP10.36□□□□□ -0.75
SNX27-205ENST00000482791 ZNF467Q7Z7K2 595 aaPredicted RBP10.34□□□□□ -0.75
SNX27-205ENST00000482791 GOLGA2Q08379 1002 aa10.33□□□□□ -0.76
SNX27-205ENST00000482791 CHRM1P11229 460 aaPredicted RBP10.32□□□□□ -0.76
SNX27-205ENST00000482791 RNF166Q96A37 237 aaPredicted RBP10.32□□□□□ -0.76
SNX27-205ENST00000482791 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
SNX27-205ENST00000482791 ERBB3P21860 1342 aa10.29□□□□□ -0.76
SNX27-205ENST00000482791 VARS2Q5ST30 1063 aaKnown RBP10.27□□□□□ -0.77
SNX27-205ENST00000482791 CABP2Q9NPB3 220 aa10.26□□□□□ -0.77
SNX27-205ENST00000482791 GSE1Q14687 1217 aa10.25□□□□□ -0.77
SNX27-205ENST00000482791 TMEM92Q6UXU6 159 aa10.25□□□□□ -0.77
SNX27-205ENST00000482791 MYT1LQ9UL68 1186 aa10.24□□□□□ -0.77
SNX27-205ENST00000482791 PDAP1Q13442 181 aaKnown RBP10.23□□□□□ -0.77
SNX27-205ENST00000482791 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
SNX27-205ENST00000482791 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
SNX27-205ENST00000482791 DOK7Q18PE1 504 aa10.19□□□□□ -0.78
SNX27-205ENST00000482791 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
SNX27-205ENST00000482791 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
SNX27-205ENST00000482791 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
SNX27-205ENST00000482791 ZNF687Q8N1G0 1237 aa10.17□□□□□ -0.78
SNX27-205ENST00000482791 EFCAB3Q8N7B9 438 aa10.13□□□□□ -0.79
SNX27-205ENST00000482791 G3V3G9 751 aa10.11□□□□□ -0.79
SNX27-205ENST00000482791 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNX27-205ENST00000482791 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
SNX27-205ENST00000482791 ARSIQ5FYB1 569 aa10.07□□□□□ -0.8
SNX27-205ENST00000482791 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
SNX27-205ENST00000482791 MS4A4AQ96JQ5 239 aa10.06□□□□□ -0.8
SNX27-205ENST00000482791 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
SNX27-205ENST00000482791 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
SNX27-205ENST00000482791 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
SNX27-205ENST00000482791 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
SNX27-205ENST00000482791 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms