RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CREBZFQ9NS37 354 aa10.12□□□□□ -0.79
KDM1A-204ENST00000481879 C7P10643 843 aa10.11□□□□□ -0.79
KDM1A-204ENST00000481879 SLC39A7Q92504 469 aa10.1□□□□□ -0.79
KDM1A-204ENST00000481879 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
KDM1A-204ENST00000481879 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
KDM1A-204ENST00000481879 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
KDM1A-204ENST00000481879 SCUBE2Q9NQ36 999 aa10.06□□□□□ -0.8
KDM1A-204ENST00000481879 ATMINO43313 823 aaPredicted RBP10.05□□□□□ -0.8
KDM1A-204ENST00000481879 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
KDM1A-204ENST00000481879 PROM2Q8N271 834 aa9.92□□□□□ -0.82
KDM1A-204ENST00000481879 POTEFA5A3E0 1075 aa9.91□□□□□ -0.82
KDM1A-204ENST00000481879 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
KDM1A-204ENST00000481879 ATN1P54259 1190 aaPredicted RBP9.9□□□□□ -0.82
KDM1A-204ENST00000481879 MMRN1Q13201 1228 aa9.89□□□□□ -0.83
KDM1A-204ENST00000481879 MNX1P50219 401 aaPredicted RBP9.88□□□□□ -0.83
KDM1A-204ENST00000481879 SPNS2Q8IVW8 549 aa9.83□□□□□ -0.84
KDM1A-204ENST00000481879 ST18O60284 1047 aa9.8□□□□□ -0.84
KDM1A-204ENST00000481879 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
KDM1A-204ENST00000481879 MIER1Q8N108 512 aa9.75□□□□□ -0.85
KDM1A-204ENST00000481879 COLQQ9Y215 455 aaPredicted RBP9.75□□□□□ -0.85
KDM1A-204ENST00000481879 PLEKHG5O94827 1062 aa9.74□□□□□ -0.85
KDM1A-204ENST00000481879 TRPC6Q9Y210 931 aa9.72□□□□□ -0.85
KDM1A-204ENST00000481879 SEC24BO95487 1268 aa9.71□□□□□ -0.86
KDM1A-204ENST00000481879 TSPYL2Q9H2G4 693 aaPredicted RBP9.71□□□□□ -0.86
KDM1A-204ENST00000481879 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.86
KDM1A-204ENST00000481879 KIF12Q96FN5 646 aa9.7□□□□□ -0.86
KDM1A-204ENST00000481879 FKBP8Q14318 412 aa9.69□□□□□ -0.86
KDM1A-204ENST00000481879 SLAIN1Q8ND83 568 aa9.69□□□□□ -0.86
KDM1A-204ENST00000481879 TIE1P35590 1138 aa9.68□□□□□ -0.86
KDM1A-204ENST00000481879 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
KDM1A-204ENST00000481879 TTLL13PA6NNM8 815 aa9.62□□□□□ -0.87
KDM1A-204ENST00000481879 TMEM121BQ9BXQ6 578 aaPredicted RBP9.62□□□□□ -0.87
KDM1A-204ENST00000481879 MAP3K13O43283 966 aa9.6□□□□□ -0.87
KDM1A-204ENST00000481879 IER5LQ5T953 404 aa9.6□□□□□ -0.87
KDM1A-204ENST00000481879 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
KDM1A-204ENST00000481879 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
KDM1A-204ENST00000481879 TRIM35Q9UPQ4 493 aa9.56□□□□□ -0.88
KDM1A-204ENST00000481879 MARVELD3Q96A59 401 aa9.55□□□□□ -0.88
KDM1A-204ENST00000481879 NUBP1P53384 320 aa9.53□□□□□ -0.88
KDM1A-204ENST00000481879 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
KDM1A-204ENST00000481879 SNPHO15079 494 aa9.49□□□□□ -0.89
KDM1A-204ENST00000481879 FAM212AQ96EL1 285 aa9.47□□□□□ -0.89
KDM1A-204ENST00000481879 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
KDM1A-204ENST00000481879 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
KDM1A-204ENST00000481879 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
KDM1A-204ENST00000481879 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
KDM1A-204ENST00000481879 PLCG2P16885 1265 aa9.44□□□□□ -0.9
KDM1A-204ENST00000481879 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
KDM1A-204ENST00000481879 EMP3P54852 163 aa9.4□□□□□ -0.9
KDM1A-204ENST00000481879 IRX5P78411 483 aaPredicted RBP9.4□□□□□ -0.9
KDM1A-204ENST00000481879 POTEB3A0JP26 581 aa9.39□□□□□ -0.91
KDM1A-204ENST00000481879 POTEBQ6S5H4 581 aa9.39□□□□□ -0.91
KDM1A-204ENST00000481879 IFNL1Q8IU54 200 aa9.38□□□□□ -0.91
KDM1A-204ENST00000481879 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
KDM1A-204ENST00000481879 KLHL34Q8N239 644 aa9.37□□□□□ -0.91
KDM1A-204ENST00000481879 HS3ST6Q96QI5 342 aa9.37□□□□□ -0.91
KDM1A-204ENST00000481879 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.36□□□□□ -0.91
KDM1A-204ENST00000481879 PYGBP11216 843 aa9.34□□□□□ -0.91
KDM1A-204ENST00000481879 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
KDM1A-204ENST00000481879 FAM205CA6NFA0 338 aa9.33□□□□□ -0.92
KDM1A-204ENST00000481879 OCEL1Q9H607 264 aa9.32□□□□□ -0.92
KDM1A-204ENST00000481879 GSE1Q14687 1217 aa9.3□□□□□ -0.92
KDM1A-204ENST00000481879 PCDHB8Q9UN66 801 aa9.27□□□□□ -0.93
KDM1A-204ENST00000481879 RNF166Q96A37 237 aaPredicted RBP9.24□□□□□ -0.93
KDM1A-204ENST00000481879 CHRM1P11229 460 aaPredicted RBP9.22□□□□□ -0.93
KDM1A-204ENST00000481879 ZNF467Q7Z7K2 595 aaPredicted RBP9.21□□□□□ -0.94
KDM1A-204ENST00000481879 IFNLR1Q8IU57 520 aaPredicted RBP9.21□□□□□ -0.94
KDM1A-204ENST00000481879 SPOCK2Q92563 424 aa9.21□□□□□ -0.94
KDM1A-204ENST00000481879 C3orf67Q6ZVT6 689 aa9.18□□□□□ -0.94
KDM1A-204ENST00000481879 CIZ1Q9ULV3 898 aaPredicted RBP9.16□□□□□ -0.94
KDM1A-204ENST00000481879 MYT1LQ9UL68 1186 aa9.14□□□□□ -0.95
KDM1A-204ENST00000481879 PSEN1P49768 467 aa9.13□□□□□ -0.95
KDM1A-204ENST00000481879 GOLGA2Q08379 1002 aa9.13□□□□□ -0.95
KDM1A-204ENST00000481879 PDCD7Q8N8D1 485 aaKnown RBP9.13□□□□□ -0.95
KDM1A-204ENST00000481879 MKRN3Q13064 507 aaKnown RBP9.12□□□□□ -0.95
KDM1A-204ENST00000481879 L3MBTL3Q96JM7 780 aaPredicted RBP9.1□□□□□ -0.95
KDM1A-204ENST00000481879 PDAP1Q13442 181 aaKnown RBP9.09□□□□□ -0.95
KDM1A-204ENST00000481879 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
KDM1A-204ENST00000481879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.06□□□□□ -0.96
KDM1A-204ENST00000481879 ERBB3P21860 1342 aa9.05□□□□□ -0.96
KDM1A-204ENST00000481879 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
KDM1A-204ENST00000481879 TRIM41Q8WV44 630 aa9.03□□□□□ -0.96
KDM1A-204ENST00000481879 CABP2Q9NPB3 220 aa9.01□□□□□ -0.97
KDM1A-204ENST00000481879 ILDR1Q86SU0 546 aaPredicted RBP8.99□□□□□ -0.97
KDM1A-204ENST00000481879 ZNF710Q8N1W2 664 aa8.98□□□□□ -0.97
KDM1A-204ENST00000481879 PTGER2P43116 358 aa8.97□□□□□ -0.97
KDM1A-204ENST00000481879 VARS2Q5ST30 1063 aaKnown RBP8.97□□□□□ -0.97
KDM1A-204ENST00000481879 DPY19L2Q6NUT2 758 aa8.96□□□□□ -0.98
KDM1A-204ENST00000481879 G3V3G9 751 aa8.93□□□□□ -0.98
KDM1A-204ENST00000481879 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
KDM1A-204ENST00000481879 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
KDM1A-204ENST00000481879 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
KDM1A-204ENST00000481879 EFCAB3Q8N7B9 438 aa8.91□□□□□ -0.98
KDM1A-204ENST00000481879 RIOK3O14730 519 aaKnown RBP8.9□□□□□ -0.98
KDM1A-204ENST00000481879 PLA2G2EQ9NZK7 142 aa8.89□□□□□ -0.99
KDM1A-204ENST00000481879 RNF25Q96BH1 459 aaPredicted RBP8.87□□□□□ -0.99
KDM1A-204ENST00000481879 VGFO15240 615 aaPredicted RBP8.86□□□□□ -0.99
KDM1A-204ENST00000481879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.85□□□□□ -0.99
KDM1A-204ENST00000481879 RIMBP2O15034 1052 aa8.85□□□□□ -0.99
KDM1A-204ENST00000481879 ZFP91Q96JP5 570 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms