RNA–Protein interactions for RNA: ENST00000481652.1

PHTF1-210, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 836 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-210ENST00000481652 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
PHTF1-210ENST00000481652 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
PHTF1-210ENST00000481652 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
PHTF1-210ENST00000481652 ASTLQ6HA08 431 aaPredicted RBP12.4□□□□□ -0.42
PHTF1-210ENST00000481652 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
PHTF1-210ENST00000481652 OTUD5Q96G74 571 aa12.38□□□□□ -0.43
PHTF1-210ENST00000481652 ATMINO43313 823 aaPredicted RBP12.34□□□□□ -0.43
PHTF1-210ENST00000481652 MIER1Q8N108 512 aa12.33□□□□□ -0.44
PHTF1-210ENST00000481652 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
PHTF1-210ENST00000481652 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
PHTF1-210ENST00000481652 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
PHTF1-210ENST00000481652 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
PHTF1-210ENST00000481652 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
PHTF1-210ENST00000481652 TRPC6Q9Y210 931 aa12.26□□□□□ -0.45
PHTF1-210ENST00000481652 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
PHTF1-210ENST00000481652 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
PHTF1-210ENST00000481652 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
PHTF1-210ENST00000481652 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
PHTF1-210ENST00000481652 POTEFA5A3E0 1075 aa12.21□□□□□ -0.45
PHTF1-210ENST00000481652 C7P10643 843 aa12.21□□□□□ -0.45
PHTF1-210ENST00000481652 NUBP1P53384 320 aa12.2□□□□□ -0.46
PHTF1-210ENST00000481652 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
PHTF1-210ENST00000481652 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
PHTF1-210ENST00000481652 MAP3K13O43283 966 aa12.19□□□□□ -0.46
PHTF1-210ENST00000481652 TIE1P35590 1138 aa12.14□□□□□ -0.47
PHTF1-210ENST00000481652 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
PHTF1-210ENST00000481652 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
PHTF1-210ENST00000481652 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
PHTF1-210ENST00000481652 LCE2DQ5TA82 110 aaPredicted RBP12.07□□□□□ -0.48
PHTF1-210ENST00000481652 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
PHTF1-210ENST00000481652 COLQQ9Y215 455 aaPredicted RBP12.04□□□□□ -0.48
PHTF1-210ENST00000481652 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
PHTF1-210ENST00000481652 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
PHTF1-210ENST00000481652 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
PHTF1-210ENST00000481652 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
PHTF1-210ENST00000481652 POTEMA6NI47 508 aa11.97□□□□□ -0.49
PHTF1-210ENST00000481652 IER5LQ5T953 404 aa11.96□□□□□ -0.49
PHTF1-210ENST00000481652 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
PHTF1-210ENST00000481652 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
PHTF1-210ENST00000481652 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
PHTF1-210ENST00000481652 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
PHTF1-210ENST00000481652 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
PHTF1-210ENST00000481652 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
PHTF1-210ENST00000481652 GSE1Q14687 1217 aa11.88□□□□□ -0.51
PHTF1-210ENST00000481652 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
PHTF1-210ENST00000481652 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
PHTF1-210ENST00000481652 PYGBP11216 843 aa11.82□□□□□ -0.52
PHTF1-210ENST00000481652 SEC24BO95487 1268 aa11.81□□□□□ -0.52
PHTF1-210ENST00000481652 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
PHTF1-210ENST00000481652 CECR2Q9BXF3 1484 aa11.81□□□□□ -0.52
PHTF1-210ENST00000481652 PCDH10Q9P2E7 1040 aa11.79□□□□□ -0.52
PHTF1-210ENST00000481652 RB1CC1Q8TDY2 1594 aa11.77□□□□□ -0.53
PHTF1-210ENST00000481652 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.53
PHTF1-210ENST00000481652 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
PHTF1-210ENST00000481652 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
PHTF1-210ENST00000481652 CCDC180Q9P1Z9 1646 aa11.72□□□□□ -0.53
PHTF1-210ENST00000481652 PLCG2P16885 1265 aa11.7□□□□□ -0.54
PHTF1-210ENST00000481652 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
PHTF1-210ENST00000481652 OCEL1Q9H607 264 aa11.7□□□□□ -0.54
PHTF1-210ENST00000481652 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
PHTF1-210ENST00000481652 SLAIN1Q8ND83 568 aa11.66□□□□□ -0.54
PHTF1-210ENST00000481652 CC2D2AQ9P2K1 1620 aa11.65□□□□□ -0.54
PHTF1-210ENST00000481652 ST18O60284 1047 aa11.64□□□□□ -0.55
PHTF1-210ENST00000481652 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
PHTF1-210ENST00000481652 CUX2O14529 1486 aa11.62□□□□□ -0.55
PHTF1-210ENST00000481652 PSEN1P49768 467 aa11.56□□□□□ -0.56
PHTF1-210ENST00000481652 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
PHTF1-210ENST00000481652 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
PHTF1-210ENST00000481652 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
PHTF1-210ENST00000481652 PKD2Q13563 968 aa11.52□□□□□ -0.57
PHTF1-210ENST00000481652 PDAP1Q13442 181 aaKnown RBP11.51□□□□□ -0.57
PHTF1-210ENST00000481652 BICRAQ9NZM4 1560 aa11.5□□□□□ -0.57
PHTF1-210ENST00000481652 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
PHTF1-210ENST00000481652 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.5□□□□□ -0.57
PHTF1-210ENST00000481652 TAOK2Q9UL54 1235 aa11.5□□□□□ -0.57
PHTF1-210ENST00000481652 RIOK3O14730 519 aaKnown RBP11.48□□□□□ -0.57
PHTF1-210ENST00000481652 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
PHTF1-210ENST00000481652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
PHTF1-210ENST00000481652 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
PHTF1-210ENST00000481652 L3MBTL3Q96JM7 780 aaPredicted RBP11.44□□□□□ -0.58
PHTF1-210ENST00000481652 VGFO15240 615 aaPredicted RBP11.43□□□□□ -0.58
PHTF1-210ENST00000481652 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
PHTF1-210ENST00000481652 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
PHTF1-210ENST00000481652 SNPHO15079 494 aa11.41□□□□□ -0.58
PHTF1-210ENST00000481652 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
PHTF1-210ENST00000481652 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
PHTF1-210ENST00000481652 RGL2O15211 777 aa11.38□□□□□ -0.59
PHTF1-210ENST00000481652 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
PHTF1-210ENST00000481652 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
PHTF1-210ENST00000481652 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
PHTF1-210ENST00000481652 NACADO15069 1562 aa11.37□□□□□ -0.59
PHTF1-210ENST00000481652 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
PHTF1-210ENST00000481652 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.35□□□□□ -0.59
PHTF1-210ENST00000481652 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
PHTF1-210ENST00000481652 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
PHTF1-210ENST00000481652 BOLA1Q9Y3E2 137 aa11.33□□□□□ -0.6
PHTF1-210ENST00000481652 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
PHTF1-210ENST00000481652 EIF4G1Q04637 1599 aaKnown RBP11.31□□□□□ -0.6
PHTF1-210ENST00000481652 EFCAB3Q8N7B9 438 aa11.3□□□□□ -0.6
PHTF1-210ENST00000481652 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms