RNA–Protein interactions for RNA: ENST00000481468.1

GFM1-209, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 3

Gene GFM1, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-209ENST00000481468 VASPP50552 380 aaPredicted RBP11.9□□□□□ -0.5
GFM1-209ENST00000481468 NUBP1P53384 320 aa11.9□□□□□ -0.5
GFM1-209ENST00000481468 TSPYL2Q9H2G4 693 aaPredicted RBP11.9□□□□□ -0.5
GFM1-209ENST00000481468 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
GFM1-209ENST00000481468 GALR2O43603 387 aaPredicted RBP11.85□□□□□ -0.51
GFM1-209ENST00000481468 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
GFM1-209ENST00000481468 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
GFM1-209ENST00000481468 PLEKHG5O94827 1062 aa11.79□□□□□ -0.52
GFM1-209ENST00000481468 DCBLD2Q96PD2 775 aa11.79□□□□□ -0.52
GFM1-209ENST00000481468 PCDH10Q9P2E7 1040 aa11.79□□□□□ -0.52
GFM1-209ENST00000481468 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
GFM1-209ENST00000481468 LCE2DQ5TA82 110 aaPredicted RBP11.76□□□□□ -0.53
GFM1-209ENST00000481468 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
GFM1-209ENST00000481468 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
GFM1-209ENST00000481468 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
GFM1-209ENST00000481468 CLCN6P51797 869 aa11.73□□□□□ -0.53
GFM1-209ENST00000481468 MAP3K13O43283 966 aa11.71□□□□□ -0.53
GFM1-209ENST00000481468 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
GFM1-209ENST00000481468 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
GFM1-209ENST00000481468 PELP1Q8IZL8 1130 aaKnown RBP11.68□□□□□ -0.54
GFM1-209ENST00000481468 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
GFM1-209ENST00000481468 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
GFM1-209ENST00000481468 PYGBP11216 843 aa11.62□□□□□ -0.55
GFM1-209ENST00000481468 FAM212AQ96EL1 285 aa11.62□□□□□ -0.55
GFM1-209ENST00000481468 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
GFM1-209ENST00000481468 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
GFM1-209ENST00000481468 ATMINO43313 823 aaPredicted RBP11.58□□□□□ -0.56
GFM1-209ENST00000481468 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
GFM1-209ENST00000481468 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
GFM1-209ENST00000481468 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
GFM1-209ENST00000481468 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
GFM1-209ENST00000481468 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
GFM1-209ENST00000481468 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
GFM1-209ENST00000481468 DCAF1Q9Y4B6 1507 aa11.53□□□□□ -0.56
GFM1-209ENST00000481468 ABCC9O60706 1549 aa11.51□□□□□ -0.57
GFM1-209ENST00000481468 CIZ1Q9ULV3 898 aaPredicted RBP11.49□□□□□ -0.57
GFM1-209ENST00000481468 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
GFM1-209ENST00000481468 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
GFM1-209ENST00000481468 GSE1Q14687 1217 aa11.47□□□□□ -0.57
GFM1-209ENST00000481468 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
GFM1-209ENST00000481468 MYO15BQ96JP2 1530 aa11.46□□□□□ -0.57
GFM1-209ENST00000481468 POTEFA5A3E0 1075 aa11.46□□□□□ -0.57
GFM1-209ENST00000481468 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
GFM1-209ENST00000481468 TIE1P35590 1138 aa11.44□□□□□ -0.58
GFM1-209ENST00000481468 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
GFM1-209ENST00000481468 TMEM106CQ9BVX2 250 aa11.39□□□□□ -0.59
GFM1-209ENST00000481468 COLQQ9Y215 455 aaPredicted RBP11.39□□□□□ -0.59
GFM1-209ENST00000481468 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
GFM1-209ENST00000481468 NACADO15069 1562 aa11.37□□□□□ -0.59
GFM1-209ENST00000481468 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
GFM1-209ENST00000481468 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
GFM1-209ENST00000481468 CDAN1Q8IWY9 1227 aa11.35□□□□□ -0.59
GFM1-209ENST00000481468 SLC39A7Q92504 469 aa11.35□□□□□ -0.59
GFM1-209ENST00000481468 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
GFM1-209ENST00000481468 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
GFM1-209ENST00000481468 C7P10643 843 aa11.33□□□□□ -0.6
GFM1-209ENST00000481468 PKD2Q13563 968 aa11.31□□□□□ -0.6
GFM1-209ENST00000481468 RB1CC1Q8TDY2 1594 aa11.3□□□□□ -0.6
GFM1-209ENST00000481468 PSEN1P49768 467 aa11.29□□□□□ -0.6
GFM1-209ENST00000481468 ZNF467Q7Z7K2 595 aaPredicted RBP11.29□□□□□ -0.6
GFM1-209ENST00000481468 IRX5P78411 483 aaPredicted RBP11.25□□□□□ -0.61
GFM1-209ENST00000481468 MAMSTRQ6ZN01 415 aa11.23□□□□□ -0.61
GFM1-209ENST00000481468 MMRN1Q13201 1228 aa11.22□□□□□ -0.61
GFM1-209ENST00000481468 PDAP1Q13442 181 aaKnown RBP11.22□□□□□ -0.61
GFM1-209ENST00000481468 IER5LQ5T953 404 aa11.2□□□□□ -0.62
GFM1-209ENST00000481468 RIOK3O14730 519 aaKnown RBP11.18□□□□□ -0.62
GFM1-209ENST00000481468 RGL2O15211 777 aa11.18□□□□□ -0.62
GFM1-209ENST00000481468 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
GFM1-209ENST00000481468 SEC24BO95487 1268 aa11.17□□□□□ -0.62
GFM1-209ENST00000481468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.16□□□□□ -0.62
GFM1-209ENST00000481468 ECM2O94769 699 aaPredicted RBP11.16□□□□□ -0.62
GFM1-209ENST00000481468 PDCD7Q8N8D1 485 aaKnown RBP11.16□□□□□ -0.62
GFM1-209ENST00000481468 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
GFM1-209ENST00000481468 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
GFM1-209ENST00000481468 DPY19L2Q6NUT2 758 aa11.14□□□□□ -0.63
GFM1-209ENST00000481468 SCUBE2Q9NQ36 999 aa11.14□□□□□ -0.63
GFM1-209ENST00000481468 SPNS2Q8IVW8 549 aa11.13□□□□□ -0.63
GFM1-209ENST00000481468 ILDR1Q86SU0 546 aaPredicted RBP11.12□□□□□ -0.63
GFM1-209ENST00000481468 OCEL1Q9H607 264 aa11.12□□□□□ -0.63
GFM1-209ENST00000481468 EFCAB3Q8N7B9 438 aa11.11□□□□□ -0.63
GFM1-209ENST00000481468 SCRIBQ14160 1630 aa11.1□□□□□ -0.63
GFM1-209ENST00000481468 PLCG2P16885 1265 aa11.1□□□□□ -0.63
GFM1-209ENST00000481468 SHROOM4Q9ULL8 1493 aa11.07□□□□□ -0.64
GFM1-209ENST00000481468 VGFO15240 615 aaPredicted RBP11.07□□□□□ -0.64
GFM1-209ENST00000481468 MKRN3Q13064 507 aaKnown RBP11.07□□□□□ -0.64
GFM1-209ENST00000481468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.64
GFM1-209ENST00000481468 UNC13AQ9UPW8 1703 aa11.04□□□□□ -0.64
GFM1-209ENST00000481468 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
GFM1-209ENST00000481468 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
GFM1-209ENST00000481468 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
GFM1-209ENST00000481468 PHF8Q9UPP1 1060 aa11.01□□□□□ -0.65
GFM1-209ENST00000481468 ST18O60284 1047 aa11□□□□□ -0.65
GFM1-209ENST00000481468 STK24Q9Y6E0 443 aa10.98□□□□□ -0.65
GFM1-209ENST00000481468 STK25O00506 426 aa10.97□□□□□ -0.65
GFM1-209ENST00000481468 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
GFM1-209ENST00000481468 MFRPQ9BY79 579 aa10.95□□□□□ -0.66
GFM1-209ENST00000481468 SLAIN1Q8ND83 568 aa10.94□□□□□ -0.66
GFM1-209ENST00000481468 BICRAQ9NZM4 1560 aa10.91□□□□□ -0.66
GFM1-209ENST00000481468 SOX12O15370 315 aa10.9□□□□□ -0.66
GFM1-209ENST00000481468 TMEM121BQ9BXQ6 578 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms