RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 CHGAP10645 457 aaKnown RBP14.66□□□□□ -0.06
SPTA1-205ENST00000481212 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
SPTA1-205ENST00000481212 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
SPTA1-205ENST00000481212 TAOK2Q9UL54 1235 aa14.61□□□□□ -0.07
SPTA1-205ENST00000481212 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
SPTA1-205ENST00000481212 CHRM1P11229 460 aaPredicted RBP14.59□□□□□ -0.07
SPTA1-205ENST00000481212 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
SPTA1-205ENST00000481212 RIOK3O14730 519 aaKnown RBP14.57□□□□□ -0.08
SPTA1-205ENST00000481212 SPRYD3Q8NCJ5 442 aa14.56□□□□□ -0.08
SPTA1-205ENST00000481212 RNF25Q96BH1 459 aaPredicted RBP14.56□□□□□ -0.08
SPTA1-205ENST00000481212 FARP1Q9Y4F1 1045 aaPredicted RBP14.54□□□□□ -0.08
SPTA1-205ENST00000481212 HS6ST3Q8IZP7 471 aa14.52□□□□□ -0.09
SPTA1-205ENST00000481212 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
SPTA1-205ENST00000481212 VSIG10Q8N0Z9 540 aa14.5□□□□□ -0.09
SPTA1-205ENST00000481212 PYGBP11216 843 aa14.49□□□□□ -0.09
SPTA1-205ENST00000481212 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
SPTA1-205ENST00000481212 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
SPTA1-205ENST00000481212 TSPYL2Q9H2G4 693 aaPredicted RBP14.47□□□□□ -0.09
SPTA1-205ENST00000481212 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
SPTA1-205ENST00000481212 DNAJC5Q9H3Z4 198 aa14.42□□□□□ -0.1
SPTA1-205ENST00000481212 STK25O00506 426 aa14.4□□□□□ -0.1
SPTA1-205ENST00000481212 SGIP1Q9BQI5 828 aa14.4□□□□□ -0.1
SPTA1-205ENST00000481212 PIP4P2Q8N4L2 257 aa14.35□□□□□ -0.11
SPTA1-205ENST00000481212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.34□□□□□ -0.11
SPTA1-205ENST00000481212 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
SPTA1-205ENST00000481212 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
SPTA1-205ENST00000481212 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
SPTA1-205ENST00000481212 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
SPTA1-205ENST00000481212 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
SPTA1-205ENST00000481212 BCL11BQ9C0K0 894 aaPredicted RBP14.31□□□□□ -0.12
SPTA1-205ENST00000481212 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
SPTA1-205ENST00000481212 NKX1-1Q15270 411 aaPredicted RBP14.3□□□□□ -0.12
SPTA1-205ENST00000481212 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
SPTA1-205ENST00000481212 GTPBP6O43824 516 aaPredicted RBP14.24□□□□□ -0.13
SPTA1-205ENST00000481212 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
SPTA1-205ENST00000481212 PCDHB8Q9UN66 801 aa14.22□□□□□ -0.13
SPTA1-205ENST00000481212 PCDHB13Q9Y5F0 798 aa14.22□□□□□ -0.13
SPTA1-205ENST00000481212 ZNF579Q8NAF0 562 aaKnown RBP14.21□□□□□ -0.13
SPTA1-205ENST00000481212 RYDENQ9NUL5 291 aaKnown RBP14.21□□□□□ -0.13
SPTA1-205ENST00000481212 BCANQ96GW7 911 aa14.2□□□□□ -0.14
SPTA1-205ENST00000481212 CCDC180Q9P1Z9 1646 aa14.16□□□□□ -0.14
SPTA1-205ENST00000481212 PSEN1P49768 467 aa14.16□□□□□ -0.14
SPTA1-205ENST00000481212 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
SPTA1-205ENST00000481212 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
SPTA1-205ENST00000481212 MAP3K13O43283 966 aa14.12□□□□□ -0.15
SPTA1-205ENST00000481212 CD44P16070 742 aaKnown RBP14.12□□□□□ -0.15
SPTA1-205ENST00000481212 IFNL1Q8IU54 200 aa14.11□□□□□ -0.15
SPTA1-205ENST00000481212 PHF12Q96QT6 1004 aa14□□□□□ -0.17
SPTA1-205ENST00000481212 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
SPTA1-205ENST00000481212 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
SPTA1-205ENST00000481212 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
SPTA1-205ENST00000481212 MFRPQ9BY79 579 aa13.95□□□□□ -0.18
SPTA1-205ENST00000481212 SOX12O15370 315 aa13.94□□□□□ -0.18
SPTA1-205ENST00000481212 NLRP6P59044 892 aa13.92□□□□□ -0.18
SPTA1-205ENST00000481212 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
SPTA1-205ENST00000481212 NBR1Q14596 966 aa13.86□□□□□ -0.19
SPTA1-205ENST00000481212 TMEM106CQ9BVX2 250 aa13.86□□□□□ -0.19
SPTA1-205ENST00000481212 PHF8Q9UPP1 1060 aa13.86□□□□□ -0.19
SPTA1-205ENST00000481212 POTEHQ6S545 545 aa13.85□□□□□ -0.19
SPTA1-205ENST00000481212 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
SPTA1-205ENST00000481212 FBXO22Q8NEZ5 403 aa13.84□□□□□ -0.19
SPTA1-205ENST00000481212 WDR70Q9NW82 654 aa13.83□□□□□ -0.2
SPTA1-205ENST00000481212 PPP1R37O75864 691 aa13.81□□□□□ -0.2
SPTA1-205ENST00000481212 CADPS2Q86UW7 1296 aa13.81□□□□□ -0.2
SPTA1-205ENST00000481212 HAX1O00165 279 aa13.8□□□□□ -0.2
SPTA1-205ENST00000481212 TRPC6Q9Y210 931 aa13.8□□□□□ -0.2
SPTA1-205ENST00000481212 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
SPTA1-205ENST00000481212 TIE1P35590 1138 aa13.76□□□□□ -0.21
SPTA1-205ENST00000481212 PRKCSHP14314 528 aaPredicted RBP13.75□□□□□ -0.21
SPTA1-205ENST00000481212 CLCN6P51797 869 aa13.74□□□□□ -0.21
SPTA1-205ENST00000481212 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
SPTA1-205ENST00000481212 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.21
SPTA1-205ENST00000481212 TTLL13PA6NNM8 815 aa13.7□□□□□ -0.22
SPTA1-205ENST00000481212 RB1CC1Q8TDY2 1594 aa13.7□□□□□ -0.22
SPTA1-205ENST00000481212 MS4A4AQ96JQ5 239 aa13.69□□□□□ -0.22
SPTA1-205ENST00000481212 GALR2O43603 387 aaPredicted RBP13.68□□□□□ -0.22
SPTA1-205ENST00000481212 EVX2Q03828 476 aa13.67□□□□□ -0.22
SPTA1-205ENST00000481212 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
SPTA1-205ENST00000481212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPTA1-205ENST00000481212 PDE4AP27815 886 aa13.63□□□□□ -0.23
SPTA1-205ENST00000481212 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
SPTA1-205ENST00000481212 KCNV2Q8TDN2 545 aa13.6□□□□□ -0.23
SPTA1-205ENST00000481212 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
SPTA1-205ENST00000481212 E2F4Q16254 413 aa13.57□□□□□ -0.24
SPTA1-205ENST00000481212 ILDR1Q86SU0 546 aaPredicted RBP13.57□□□□□ -0.24
SPTA1-205ENST00000481212 NACADO15069 1562 aa13.55□□□□□ -0.24
SPTA1-205ENST00000481212 NCKAP5LQ9HCH0 1330 aa13.55□□□□□ -0.24
SPTA1-205ENST00000481212 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
SPTA1-205ENST00000481212 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
SPTA1-205ENST00000481212 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
SPTA1-205ENST00000481212 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
SPTA1-205ENST00000481212 MFSD10Q14728 455 aa13.49□□□□□ -0.25
SPTA1-205ENST00000481212 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
SPTA1-205ENST00000481212 DPY19L2Q6NUT2 758 aa13.49□□□□□ -0.25
SPTA1-205ENST00000481212 DDX27Q96GQ7 796 aaKnown RBP13.49□□□□□ -0.25
SPTA1-205ENST00000481212 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
SPTA1-205ENST00000481212 GABBR2O75899 941 aa13.46□□□□□ -0.25
SPTA1-205ENST00000481212 IER5LQ5T953 404 aa13.46□□□□□ -0.25
SPTA1-205ENST00000481212 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
SPTA1-205ENST00000481212 TULP1O00294 542 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms