RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 TSPYL2Q9H2G4 693 aaPredicted RBP16.01■□□□□ 0.15
CBX3-206ENST00000481057 RGL2O15211 777 aa15.95■□□□□ 0.14
CBX3-206ENST00000481057 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
CBX3-206ENST00000481057 CD44P16070 742 aaKnown RBP15.92■□□□□ 0.14
CBX3-206ENST00000481057 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
CBX3-206ENST00000481057 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
CBX3-206ENST00000481057 CHRM1P11229 460 aaPredicted RBP15.91■□□□□ 0.14
CBX3-206ENST00000481057 PYGBP11216 843 aa15.9■□□□□ 0.14
CBX3-206ENST00000481057 C19orf67A6NJJ6 358 aa15.89■□□□□ 0.13
CBX3-206ENST00000481057 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
CBX3-206ENST00000481057 RNF25Q96BH1 459 aaPredicted RBP15.87■□□□□ 0.13
CBX3-206ENST00000481057 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
CBX3-206ENST00000481057 RIOK3O14730 519 aaKnown RBP15.79■□□□□ 0.12
CBX3-206ENST00000481057 POTEHQ6S545 545 aa15.79■□□□□ 0.12
CBX3-206ENST00000481057 HAX1O00165 279 aa15.75■□□□□ 0.11
CBX3-206ENST00000481057 ZNF579Q8NAF0 562 aaKnown RBP15.75■□□□□ 0.11
CBX3-206ENST00000481057 KIF12Q96FN5 646 aa15.74■□□□□ 0.11
CBX3-206ENST00000481057 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
CBX3-206ENST00000481057 ZNF467Q7Z7K2 595 aaPredicted RBP15.71■□□□□ 0.11
CBX3-206ENST00000481057 MAP3K13O43283 966 aa15.7■□□□□ 0.1
CBX3-206ENST00000481057 VGFO15240 615 aaPredicted RBP15.69■□□□□ 0.1
CBX3-206ENST00000481057 SGIP1Q9BQI5 828 aa15.69■□□□□ 0.1
CBX3-206ENST00000481057 TAOK2Q9UL54 1235 aa15.69■□□□□ 0.1
CBX3-206ENST00000481057 PCDHB13Q9Y5F0 798 aa15.68■□□□□ 0.1
CBX3-206ENST00000481057 EVX2Q03828 476 aa15.66■□□□□ 0.1
CBX3-206ENST00000481057 PCDHB8Q9UN66 801 aa15.66■□□□□ 0.1
CBX3-206ENST00000481057 IFNL1Q8IU54 200 aa15.64■□□□□ 0.09
CBX3-206ENST00000481057 CHGAP10645 457 aaKnown RBP15.63■□□□□ 0.09
CBX3-206ENST00000481057 HS6ST3Q8IZP7 471 aa15.62■□□□□ 0.09
CBX3-206ENST00000481057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.6■□□□□ 0.09
CBX3-206ENST00000481057 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
CBX3-206ENST00000481057 PDAP1Q13442 181 aaKnown RBP15.59■□□□□ 0.09
CBX3-206ENST00000481057 MS4A3Q96HJ5 214 aa15.57■□□□□ 0.08
CBX3-206ENST00000481057 STK25O00506 426 aa15.56■□□□□ 0.08
CBX3-206ENST00000481057 BBXQ8WY36 941 aaPredicted RBP15.55■□□□□ 0.08
CBX3-206ENST00000481057 PSEN1P49768 467 aa15.53■□□□□ 0.08
CBX3-206ENST00000481057 BCL11BQ9C0K0 894 aaPredicted RBP15.52■□□□□ 0.08
CBX3-206ENST00000481057 STK24Q9Y6E0 443 aa15.5■□□□□ 0.07
CBX3-206ENST00000481057 CLCN6P51797 869 aa15.49■□□□□ 0.07
CBX3-206ENST00000481057 GALR2O43603 387 aaPredicted RBP15.46■□□□□ 0.07
CBX3-206ENST00000481057 TRPC6Q9Y210 931 aa15.46■□□□□ 0.07
CBX3-206ENST00000481057 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.45■□□□□ 0.06
CBX3-206ENST00000481057 PLCB2Q00722 1185 aa15.42■□□□□ 0.06
CBX3-206ENST00000481057 NKX1-1Q15270 411 aaPredicted RBP15.4■□□□□ 0.06
CBX3-206ENST00000481057 GABBR2O75899 941 aa15.38■□□□□ 0.05
CBX3-206ENST00000481057 TIE1P35590 1138 aa15.38■□□□□ 0.05
CBX3-206ENST00000481057 TMEM106CQ9BVX2 250 aa15.38■□□□□ 0.05
CBX3-206ENST00000481057 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
CBX3-206ENST00000481057 CABP2Q9NPB3 220 aa15.34■□□□□ 0.05
CBX3-206ENST00000481057 BMP2KQ9NSY1 1161 aaPredicted RBP15.34■□□□□ 0.05
CBX3-206ENST00000481057 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
CBX3-206ENST00000481057 SPRYD3Q8NCJ5 442 aa15.31■□□□□ 0.04
CBX3-206ENST00000481057 SLC24A1O60721 1099 aa15.3■□□□□ 0.04
CBX3-206ENST00000481057 SP7Q8TDD2 431 aaPredicted RBP15.3■□□□□ 0.04
CBX3-206ENST00000481057 CFAP44Q96MT7 982 aa15.3■□□□□ 0.04
CBX3-206ENST00000481057 EFCAB3Q8N7B9 438 aa15.28■□□□□ 0.04
CBX3-206ENST00000481057 GTPBP6O43824 516 aaPredicted RBP15.25■□□□□ 0.03
CBX3-206ENST00000481057 GOLGA2Q08379 1002 aa15.23■□□□□ 0.03
CBX3-206ENST00000481057 ASTLQ6HA08 431 aaPredicted RBP15.23■□□□□ 0.03
CBX3-206ENST00000481057 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
CBX3-206ENST00000481057 MFRPQ9BY79 579 aa15.22■□□□□ 0.03
CBX3-206ENST00000481057 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
CBX3-206ENST00000481057 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.03
CBX3-206ENST00000481057 RYDENQ9NUL5 291 aaKnown RBP15.21■□□□□ 0.03
CBX3-206ENST00000481057 SOX12O15370 315 aa15.2■□□□□ 0.02
CBX3-206ENST00000481057 HAP1P54257 671 aaPredicted RBP15.17■□□□□ 0.02
CBX3-206ENST00000481057 MKRN3Q13064 507 aaKnown RBP15.17■□□□□ 0.02
CBX3-206ENST00000481057 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
CBX3-206ENST00000481057 FBXO22Q8NEZ5 403 aa15.16■□□□□ 0.02
CBX3-206ENST00000481057 DCBLD2Q96PD2 775 aa15.16■□□□□ 0.02
CBX3-206ENST00000481057 NLRP6P59044 892 aa15.15■□□□□ 0.02
CBX3-206ENST00000481057 ILDR1Q86SU0 546 aaPredicted RBP15.08■□□□□ 0
CBX3-206ENST00000481057 MS4A4AQ96JQ5 239 aa15.08■□□□□ 0
CBX3-206ENST00000481057 POTEIP0CG38 1075 aa15.07■□□□□ 0
CBX3-206ENST00000481057 IER5LQ5T953 404 aa15.07■□□□□ 0
CBX3-206ENST00000481057 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
CBX3-206ENST00000481057 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
CBX3-206ENST00000481057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.06■□□□□ 06e-7■■■□□ 16.1
CBX3-206ENST00000481057 PPP1R37O75864 691 aa15.02■□□□□ -0
CBX3-206ENST00000481057 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
CBX3-206ENST00000481057 PDCD7Q8N8D1 485 aaKnown RBP14.99□□□□□ -0.01
CBX3-206ENST00000481057 SLC39A7Q92504 469 aa14.98□□□□□ -0.01
CBX3-206ENST00000481057 OCEL1Q9H607 264 aa14.96□□□□□ -0.01
CBX3-206ENST00000481057 VSIG10Q8N0Z9 540 aa14.94□□□□□ -0.02
CBX3-206ENST00000481057 C7P10643 843 aa14.93□□□□□ -0.02
CBX3-206ENST00000481057 PLCG2P16885 1265 aa14.93□□□□□ -0.02
CBX3-206ENST00000481057 DPY19L2Q6NUT2 758 aa14.92□□□□□ -0.02
CBX3-206ENST00000481057 METRNQ9UJH8 293 aa14.92□□□□□ -0.02
CBX3-206ENST00000481057 COLQQ9Y215 455 aaPredicted RBP14.91□□□□□ -0.02
CBX3-206ENST00000481057 POTEFA5A3E0 1075 aa14.89□□□□□ -0.03
CBX3-206ENST00000481057 SEC24BO95487 1268 aa14.89□□□□□ -0.03
CBX3-206ENST00000481057 KDM2AQ9Y2K7 1162 aa14.89□□□□□ -0.03
CBX3-206ENST00000481057 CADPS2Q86UW7 1296 aa14.87□□□□□ -0.03
CBX3-206ENST00000481057 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
CBX3-206ENST00000481057 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
CBX3-206ENST00000481057 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.04
CBX3-206ENST00000481057 MICALL2Q8IY33 904 aa14.81□□□□□ -0.04
CBX3-206ENST00000481057 BOLA1Q9Y3E2 137 aa14.8□□□□□ -0.04
CBX3-206ENST00000481057 L3MBTL3Q96JM7 780 aaPredicted RBP14.78□□□□□ -0.04
CBX3-206ENST00000481057 TMEM121BQ9BXQ6 578 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms