RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.35
RNF220-213ENST00000480686 BRPF3Q9ULD4 1205 aa17.2■□□□□ 0.34
RNF220-213ENST00000480686 MRS2Q9HD23 443 aa17.19■□□□□ 0.34
RNF220-213ENST00000480686 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
RNF220-213ENST00000480686 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
RNF220-213ENST00000480686 CLIP1P30622 1438 aa17.15■□□□□ 0.34
RNF220-213ENST00000480686 NAP1L5Q96NT1 182 aaPredicted RBP17.14■□□□□ 0.33
RNF220-213ENST00000480686 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
RNF220-213ENST00000480686 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
RNF220-213ENST00000480686 SOGA1O94964 1423 aa17.07■□□□□ 0.32
RNF220-213ENST00000480686 GSE1Q14687 1217 aa17.05■□□□□ 0.32
RNF220-213ENST00000480686 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
RNF220-213ENST00000480686 PODXL2Q9NZ53 605 aa17.04■□□□□ 0.32
RNF220-213ENST00000480686 ARID4BQ4LE39 1312 aaPredicted RBP17.04■□□□□ 0.32
RNF220-213ENST00000480686 ABCC9O60706 1549 aa17.03■□□□□ 0.32
RNF220-213ENST00000480686 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
RNF220-213ENST00000480686 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
RNF220-213ENST00000480686 DDRGK1Q96HY6 314 aa17■□□□□ 0.31
RNF220-213ENST00000480686 PPP1R15AO75807 674 aaPredicted RBP16.97■□□□□ 0.31
RNF220-213ENST00000480686 HSP90AA2PQ14568 343 aaPredicted RBP16.97■□□□□ 0.31
RNF220-213ENST00000480686 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
RNF220-213ENST00000480686 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
RNF220-213ENST00000480686 HSP90AA1P07900 732 aaKnown RBP16.94■□□□□ 0.3
RNF220-213ENST00000480686 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
RNF220-213ENST00000480686 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
RNF220-213ENST00000480686 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
RNF220-213ENST00000480686 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
RNF220-213ENST00000480686 ZMYND15Q9H091 742 aa16.91■□□□□ 0.3
RNF220-213ENST00000480686 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
RNF220-213ENST00000480686 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
RNF220-213ENST00000480686 PDE4AP27815 886 aa16.87■□□□□ 0.29
RNF220-213ENST00000480686 EEA1Q15075 1411 aa16.87■□□□□ 0.29
RNF220-213ENST00000480686 NFKBIBQ15653 356 aa16.86■□□□□ 0.29
RNF220-213ENST00000480686 RAB3GAP2Q9H2M9 1393 aa16.85■□□□□ 0.29
RNF220-213ENST00000480686 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
RNF220-213ENST00000480686 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
RNF220-213ENST00000480686 TMC1Q8TDI8 760 aa16.84■□□□□ 0.29
RNF220-213ENST00000480686 PLEKHG5O94827 1062 aa16.83■□□□□ 0.29
RNF220-213ENST00000480686 CCNB3Q8WWL7 1395 aa16.83■□□□□ 0.29
RNF220-213ENST00000480686 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.28
RNF220-213ENST00000480686 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
RNF220-213ENST00000480686 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
RNF220-213ENST00000480686 FAM43AQ8N2R8 423 aa16.77■□□□□ 0.28
RNF220-213ENST00000480686 CEP164Q9UPV0 1460 aa16.76■□□□□ 0.27
RNF220-213ENST00000480686 C11orf95C9JLR9 678 aaPredicted RBP16.75■□□□□ 0.27
RNF220-213ENST00000480686 TRIM44Q96DX7 344 aaPredicted RBP16.75■□□□□ 0.27
RNF220-213ENST00000480686 WASHC2AQ641Q2 1341 aa16.75■□□□□ 0.27
RNF220-213ENST00000480686 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
RNF220-213ENST00000480686 NUDCQ9Y266 331 aa16.74■□□□□ 0.27
RNF220-213ENST00000480686 ZBED9Q6R2W3 1325 aa16.73■□□□□ 0.27
RNF220-213ENST00000480686 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
RNF220-213ENST00000480686 RGS3P49796 1198 aa16.73■□□□□ 0.27
RNF220-213ENST00000480686 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
RNF220-213ENST00000480686 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
RNF220-213ENST00000480686 L1TD1Q5T7N2 865 aaKnown RBP16.72■□□□□ 0.27
RNF220-213ENST00000480686 GZF1Q9H116 711 aaPredicted RBP16.72■□□□□ 0.27
RNF220-213ENST00000480686 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
RNF220-213ENST00000480686 ARID3AQ99856 593 aa16.71■□□□□ 0.27
RNF220-213ENST00000480686 EXOC6Q8TAG9 804 aa16.7■□□□□ 0.26
RNF220-213ENST00000480686 SLKQ9H2G2 1235 aaPredicted RBP16.7■□□□□ 0.26
RNF220-213ENST00000480686 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
RNF220-213ENST00000480686 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
RNF220-213ENST00000480686 WASHC2CQ9Y4E1 1318 aa16.66■□□□□ 0.26
RNF220-213ENST00000480686 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
RNF220-213ENST00000480686 BECN1Q14457 450 aa16.64■□□□□ 0.25
RNF220-213ENST00000480686 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
RNF220-213ENST00000480686 BACH2Q9BYV9 841 aa16.62■□□□□ 0.25
RNF220-213ENST00000480686 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
RNF220-213ENST00000480686 UPF2Q9HAU5 1272 aaKnown RBP16.6■□□□□ 0.25
RNF220-213ENST00000480686 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
RNF220-213ENST00000480686 RCAN3Q9UKA8 241 aa16.6■□□□□ 0.25
RNF220-213ENST00000480686 RRP9O43818 475 aaKnown RBP16.59■□□□□ 0.25
RNF220-213ENST00000480686 GOLGA6L3A6NEY3 463 aa16.59■□□□□ 0.25
RNF220-213ENST00000480686 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.25
RNF220-213ENST00000480686 CHIC2Q9UKJ5 165 aa16.58■□□□□ 0.24
RNF220-213ENST00000480686 SLC24A1O60721 1099 aa16.57■□□□□ 0.24
RNF220-213ENST00000480686 MS4A1P11836 297 aa16.57■□□□□ 0.24
RNF220-213ENST00000480686 SKAP1Q86WV1 359 aa16.56■□□□□ 0.24
RNF220-213ENST00000480686 PLIN1O60240 522 aa16.55■□□□□ 0.24
RNF220-213ENST00000480686 RRP1P56182 461 aaKnown RBP16.53■□□□□ 0.24
RNF220-213ENST00000480686 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
RNF220-213ENST00000480686 CANXP27824 592 aaKnown RBP16.52■□□□□ 0.24
RNF220-213ENST00000480686 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.24
RNF220-213ENST00000480686 POGKQ9P215 609 aa16.52■□□□□ 0.23
RNF220-213ENST00000480686 NACADO15069 1562 aa16.51■□□□□ 0.23
RNF220-213ENST00000480686 RRP7BPQ9NSQ0 103 aa16.5■□□□□ 0.23
RNF220-213ENST00000480686 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
RNF220-213ENST00000480686 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
RNF220-213ENST00000480686 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
RNF220-213ENST00000480686 RRAGDQ9NQL2 400 aaPredicted RBP16.47■□□□□ 0.23
RNF220-213ENST00000480686 FAM13BQ9NYF5 915 aa16.45■□□□□ 0.22
RNF220-213ENST00000480686 WIZO95785 1651 aa16.45■□□□□ 0.22
RNF220-213ENST00000480686 FAM161AQ3B820 660 aa16.45■□□□□ 0.22
RNF220-213ENST00000480686 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
RNF220-213ENST00000480686 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
RNF220-213ENST00000480686 RBM10P98175 930 aaKnown RBP16.42■□□□□ 0.22
RNF220-213ENST00000480686 MSNP26038 577 aaKnown RBP16.42■□□□□ 0.22
RNF220-213ENST00000480686 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
RNF220-213ENST00000480686 ZBTB7CA1YPR0 619 aa16.39■□□□□ 0.21
RNF220-213ENST00000480686 FOXD1Q16676 465 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms