RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 GTPBP6O43824 516 aaPredicted RBP10.71□□□□□ -0.69
SGIP1-209ENST00000480548 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
SGIP1-209ENST00000480548 RNF25Q96BH1 459 aaPredicted RBP10.69□□□□□ -0.7
SGIP1-209ENST00000480548 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
SGIP1-209ENST00000480548 CAPN15O75808 1086 aa10.66□□□□□ -0.7
SGIP1-209ENST00000480548 P3H3Q8IVL6 736 aa10.65□□□□□ -0.7
SGIP1-209ENST00000480548 RANGAP1P46060 587 aaPredicted RBP10.63□□□□□ -0.71
SGIP1-209ENST00000480548 PODXL2Q9NZ53 605 aa10.63□□□□□ -0.71
SGIP1-209ENST00000480548 BRPF1P55201 1214 aaPredicted RBP10.62□□□□□ -0.71
SGIP1-209ENST00000480548 RIOK3O14730 519 aaKnown RBP10.61□□□□□ -0.71
SGIP1-209ENST00000480548 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
SGIP1-209ENST00000480548 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
SGIP1-209ENST00000480548 SSUH2Q9Y2M2 353 aa10.61□□□□□ -0.71
SGIP1-209ENST00000480548 GSE1Q14687 1217 aa10.6□□□□□ -0.71
SGIP1-209ENST00000480548 STK25O00506 426 aa10.58□□□□□ -0.72
SGIP1-209ENST00000480548 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
SGIP1-209ENST00000480548 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
SGIP1-209ENST00000480548 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
SGIP1-209ENST00000480548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.57□□□□□ -0.72
SGIP1-209ENST00000480548 ABCB7O75027 752 aa10.56□□□□□ -0.72
SGIP1-209ENST00000480548 RYDENQ9NUL5 291 aaKnown RBP10.55□□□□□ -0.72
SGIP1-209ENST00000480548 VGFO15240 615 aaPredicted RBP10.51□□□□□ -0.73
SGIP1-209ENST00000480548 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
SGIP1-209ENST00000480548 OSCARQ8IYS5 282 aa10.51□□□□□ -0.73
SGIP1-209ENST00000480548 KCNV2Q8TDN2 545 aa10.49□□□□□ -0.73
SGIP1-209ENST00000480548 WDR70Q9NW82 654 aa10.48□□□□□ -0.73
SGIP1-209ENST00000480548 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.73
SGIP1-209ENST00000480548 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
SGIP1-209ENST00000480548 NUBP1P53384 320 aa10.43□□□□□ -0.74
SGIP1-209ENST00000480548 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
SGIP1-209ENST00000480548 UBTFP17480 764 aaKnown RBP10.42□□□□□ -0.74
SGIP1-209ENST00000480548 ZC3H15Q8WU90 426 aaKnown RBP10.42□□□□□ -0.74
SGIP1-209ENST00000480548 SGIP1Q9BQI5 828 aa10.39□□□□□ -0.75
SGIP1-209ENST00000480548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.38□□□□□ -0.75
SGIP1-209ENST00000480548 ZFP91Q96JP5 570 aaPredicted RBP10.38□□□□□ -0.75
SGIP1-209ENST00000480548 SLC24A3Q9HC58 644 aa10.38□□□□□ -0.75
SGIP1-209ENST00000480548 TRIM26Q12899 539 aaPredicted RBP10.35□□□□□ -0.75
SGIP1-209ENST00000480548 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
SGIP1-209ENST00000480548 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
SGIP1-209ENST00000480548 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
SGIP1-209ENST00000480548 NPM2Q86SE8 214 aaKnown RBP10.3□□□□□ -0.76
SGIP1-209ENST00000480548 ARHGEF1Q92888 912 aaKnown RBP10.3□□□□□ -0.76
SGIP1-209ENST00000480548 DSG3P32926 999 aa10.29□□□□□ -0.76
SGIP1-209ENST00000480548 ZMYND15Q9H091 742 aa10.28□□□□□ -0.76
SGIP1-209ENST00000480548 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
SGIP1-209ENST00000480548 TESPA1A2RU30 521 aaPredicted RBP10.24□□□□□ -0.77
SGIP1-209ENST00000480548 SEMA3EO15041 775 aa10.23□□□□□ -0.77
SGIP1-209ENST00000480548 ZMYND10O75800 440 aa10.23□□□□□ -0.77
SGIP1-209ENST00000480548 HRCP23327 699 aa10.23□□□□□ -0.77
SGIP1-209ENST00000480548 E2F4Q16254 413 aa10.19□□□□□ -0.78
SGIP1-209ENST00000480548 PYGBP11216 843 aa10.18□□□□□ -0.78
SGIP1-209ENST00000480548 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
SGIP1-209ENST00000480548 ARID3AQ99856 593 aa10.18□□□□□ -0.78
SGIP1-209ENST00000480548 RASEFQ8IZ41 740 aa10.17□□□□□ -0.78
SGIP1-209ENST00000480548 SMYD5Q6GMV2 418 aa10.16□□□□□ -0.78
SGIP1-209ENST00000480548 BARGINQ6ZT62 677 aa10.15□□□□□ -0.78
SGIP1-209ENST00000480548 IL27Q8NEV9 243 aa10.14□□□□□ -0.79
SGIP1-209ENST00000480548 GPBP1L1Q9HC44 474 aaPredicted RBP10.14□□□□□ -0.79
SGIP1-209ENST00000480548 AK7Q96M32 723 aa10.12□□□□□ -0.79
SGIP1-209ENST00000480548 MNX1P50219 401 aaPredicted RBP10.11□□□□□ -0.79
SGIP1-209ENST00000480548 CREBZFQ9NS37 354 aa10.1□□□□□ -0.79
SGIP1-209ENST00000480548 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
SGIP1-209ENST00000480548 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
SGIP1-209ENST00000480548 KDM4CQ9H3R0 1056 aa10.07□□□□□ -0.8
SGIP1-209ENST00000480548 ZNF467Q7Z7K2 595 aaPredicted RBP10.05□□□□□ -0.8
SGIP1-209ENST00000480548 KRI1Q8N9T8 703 aaKnown RBP10.05□□□□□ -0.8
SGIP1-209ENST00000480548 ZBTB7CA1YPR0 619 aa10.04□□□□□ -0.8
SGIP1-209ENST00000480548 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
SGIP1-209ENST00000480548 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
SGIP1-209ENST00000480548 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
SGIP1-209ENST00000480548 PDIA4P13667 645 aaKnown RBP10.02□□□□□ -0.81
SGIP1-209ENST00000480548 ARID3CA6NKF2 412 aa10.01□□□□□ -0.81
SGIP1-209ENST00000480548 APBB1O00213 710 aa10.01□□□□□ -0.81
SGIP1-209ENST00000480548 PPP1R37O75864 691 aa10□□□□□ -0.81
SGIP1-209ENST00000480548 PRR29P0C7W0 189 aa10□□□□□ -0.81
SGIP1-209ENST00000480548 MKRN3Q13064 507 aaKnown RBP10□□□□□ -0.81
SGIP1-209ENST00000480548 CHRDL2Q6WN34 429 aa10□□□□□ -0.81
SGIP1-209ENST00000480548 GPIHBP1Q8IV16 184 aa10□□□□□ -0.81
SGIP1-209ENST00000480548 PDE4DQ08499 809 aa9.97□□□□□ -0.81
SGIP1-209ENST00000480548 TRIM66O15016 1216 aa9.96□□□□□ -0.82
SGIP1-209ENST00000480548 RBM26Q5T8P6 1007 aaKnown RBP9.96□□□□□ -0.82
SGIP1-209ENST00000480548 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
SGIP1-209ENST00000480548 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
SGIP1-209ENST00000480548 LARP6Q9BRS8 491 aaKnown RBP9.94□□□□□ -0.82
SGIP1-209ENST00000480548 NCKAP5LQ9HCH0 1330 aa9.93□□□□□ -0.82
SGIP1-209ENST00000480548 FLIIQ13045 1269 aa9.93□□□□□ -0.82
SGIP1-209ENST00000480548 PCDHB8Q9UN66 801 aa9.93□□□□□ -0.82
SGIP1-209ENST00000480548 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
SGIP1-209ENST00000480548 PSEN1P49768 467 aa9.92□□□□□ -0.82
SGIP1-209ENST00000480548 NLRP6P59044 892 aa9.92□□□□□ -0.82
SGIP1-209ENST00000480548 ZNF316A6NFI3 1004 aaPredicted RBP9.91□□□□□ -0.82
SGIP1-209ENST00000480548 FBXO22Q8NEZ5 403 aa9.91□□□□□ -0.82
SGIP1-209ENST00000480548 PDE4AP27815 886 aa9.9□□□□□ -0.82
SGIP1-209ENST00000480548 MFSD10Q14728 455 aa9.9□□□□□ -0.82
SGIP1-209ENST00000480548 FAM117AQ9C073 453 aa9.9□□□□□ -0.82
SGIP1-209ENST00000480548 MLLT3P42568 568 aaPredicted RBP9.88□□□□□ -0.83
SGIP1-209ENST00000480548 NECTIN2Q92692 538 aa9.88□□□□□ -0.83
SGIP1-209ENST00000480548 DDX27Q96GQ7 796 aaKnown RBP9.88□□□□□ -0.83
SGIP1-209ENST00000480548 CCDC82Q8N4S0 544 aa9.86□□□□□ -0.83
SGIP1-209ENST00000480548 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms