RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 TAF7LQ5H9L4 462 aa5.54□□□□□ -1.52
SCN2A-205ENST00000480032 AXDND1Q5T1B0 1012 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-205ENST00000480032 TRIM41Q8WV44 630 aa5.53□□□□□ -1.52
SCN2A-205ENST00000480032 FAM193AP78312 1265 aa5.53□□□□□ -1.52
SCN2A-205ENST00000480032 PPARGC1BQ86YN6 1023 aaKnown RBP5.53□□□□□ -1.52
SCN2A-205ENST00000480032 ATP1B4Q9UN42 357 aaPredicted RBP5.53□□□□□ -1.52
SCN2A-205ENST00000480032 ANP32CO43423 234 aa5.53□□□□□ -1.52
SCN2A-205ENST00000480032 CCER2I3L3R5 266 aa5.52□□□□□ -1.53
SCN2A-205ENST00000480032 CCDC66A2RUB6 948 aa5.52□□□□□ -1.53
SCN2A-205ENST00000480032 NOP58Q9Y2X3 529 aaKnown RBP5.52□□□□□ -1.53
SCN2A-205ENST00000480032 NAP1L5Q96NT1 182 aaPredicted RBP5.52□□□□□ -1.53
SCN2A-205ENST00000480032 C11orf95C9JLR9 678 aaPredicted RBP5.51□□□□□ -1.53
SCN2A-205ENST00000480032 GOLGA6L6A8MZA4 724 aa5.51□□□□□ -1.53
SCN2A-205ENST00000480032 BRD2P25440 801 aaKnown RBP5.51□□□□□ -1.53
SCN2A-205ENST00000480032 GOLGA6L1Q8N7Z2 621 aa5.51□□□□□ -1.53
SCN2A-205ENST00000480032 CHAF1AQ13111 956 aaPredicted RBP5.51□□□□□ -1.53
SCN2A-205ENST00000480032 ZNF526Q8TF50 670 aaPredicted RBP5.5□□□□□ -1.53
SCN2A-205ENST00000480032 NRDCO43847 1150 aa5.5□□□□□ -1.53
SCN2A-205ENST00000480032 CCDC136Q96JN2 1154 aa5.49□□□□□ -1.53
SCN2A-205ENST00000480032 TCERG1O14776 1098 aaKnown RBP5.49□□□□□ -1.53
SCN2A-205ENST00000480032 TPM2P07951 284 aa5.49□□□□□ -1.53
SCN2A-205ENST00000480032 HMGN5P82970 282 aaKnown RBP5.49□□□□□ -1.53
SCN2A-205ENST00000480032 DHX8Q14562 1220 aaKnown RBP5.49□□□□□ -1.53
SCN2A-205ENST00000480032 AAMPQ13685 434 aa5.48□□□□□ -1.53
SCN2A-205ENST00000480032 CTR9Q6PD62 1173 aa5.48□□□□□ -1.53
SCN2A-205ENST00000480032 CSPP1Q1MSJ5 1256 aa5.47□□□□□ -1.53
SCN2A-205ENST00000480032 FAM43AQ8N2R8 423 aa5.47□□□□□ -1.53
SCN2A-205ENST00000480032 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.47□□□□□ -1.53
SCN2A-205ENST00000480032 SSR1P43307 286 aaKnown RBP5.47□□□□□ -1.53
SCN2A-205ENST00000480032 SETQ01105 290 aaPredicted RBP5.47□□□□□ -1.53
SCN2A-205ENST00000480032 CAVIN1Q6NZI2 390 aaKnown RBP5.47□□□□□ -1.53
SCN2A-205ENST00000480032 PDCL2Q8N4E4 241 aa5.47□□□□□ -1.53
SCN2A-205ENST00000480032 PPP4R2Q9NY27 417 aa5.47□□□□□ -1.53
SCN2A-205ENST00000480032 HAP1P54257 671 aaPredicted RBP5.47□□□□□ -1.53
SCN2A-205ENST00000480032 KLHL34Q8N239 644 aa5.46□□□□□ -1.53
SCN2A-205ENST00000480032 CLGNO14967 610 aa5.46□□□□□ -1.53
SCN2A-205ENST00000480032 CLSTN1O94985 981 aa5.46□□□□□ -1.54
SCN2A-205ENST00000480032 TERF1P54274 439 aa5.46□□□□□ -1.54
SCN2A-205ENST00000480032 CANXP27824 592 aaKnown RBP5.45□□□□□ -1.54
SCN2A-205ENST00000480032 CHMP4BQ9H444 224 aaKnown RBP5.45□□□□□ -1.54
SCN2A-205ENST00000480032 DEKP35659 375 aaKnown RBP5.45□□□□□ -1.54
SCN2A-205ENST00000480032 KIF20AO95235 890 aa5.45□□□□□ -1.54
SCN2A-205ENST00000480032 NGEFQ8N5V2 710 aa5.45□□□□□ -1.54
SCN2A-205ENST00000480032 MS4A1P11836 297 aa5.44□□□□□ -1.54
SCN2A-205ENST00000480032 USP8P40818 1118 aa5.44□□□□□ -1.54
SCN2A-205ENST00000480032 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.44□□□□□ -1.54
SCN2A-205ENST00000480032 RBM28Q9NW13 759 aaKnown RBP5.43□□□□□ -1.54
SCN2A-205ENST00000480032 SKOR2Q2VWA4 1001 aaPredicted RBP5.43□□□□□ -1.54
SCN2A-205ENST00000480032 PDCL3Q9H2J4 239 aa5.43□□□□□ -1.54
SCN2A-205ENST00000480032 NOM1Q5C9Z4 860 aaKnown RBP5.43□□□□□ -1.54
SCN2A-205ENST00000480032 PDE4CQ08493 712 aa5.42□□□□□ -1.54
SCN2A-205ENST00000480032 GPS2Q13227 327 aa5.42□□□□□ -1.54
SCN2A-205ENST00000480032 PDIA4P13667 645 aaKnown RBP5.42□□□□□ -1.54
SCN2A-205ENST00000480032 IPO9Q96P70 1041 aaKnown RBP5.41□□□□□ -1.54
SCN2A-205ENST00000480032 VGFO15240 615 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-205ENST00000480032 PES1O00541 588 aaKnown RBP5.41□□□□□ -1.54
SCN2A-205ENST00000480032 MSNP26038 577 aaKnown RBP5.41□□□□□ -1.54
SCN2A-205ENST00000480032 SUPT16HQ9Y5B9 1047 aaKnown RBP5.41□□□□□ -1.54
SCN2A-205ENST00000480032 RBM19Q9Y4C8 960 aaKnown RBP5.41□□□□□ -1.54
SCN2A-205ENST00000480032 RB1CC1Q8TDY2 1594 aa5.41□□□□□ -1.54
SCN2A-205ENST00000480032 TNNT3P45378 269 aaPredicted RBP5.41□□□□□ -1.54
SCN2A-205ENST00000480032 GSE1Q14687 1217 aa5.41□□□□□ -1.54
SCN2A-205ENST00000480032 CENPJQ9HC77 1338 aaPredicted RBP5.4□□□□□ -1.54
SCN2A-205ENST00000480032 ZNF622Q969S3 477 aaKnown RBP eCLIP5.4□□□□□ -1.54
SCN2A-205ENST00000480032 HTATSF1O43719 755 aaKnown RBP5.4□□□□□ -1.55
SCN2A-205ENST00000480032 PHLDB1Q86UU1 1377 aa5.4□□□□□ -1.55
SCN2A-205ENST00000480032 MCM5P33992 734 aa5.4□□□□□ -1.55
SCN2A-205ENST00000480032 TPM3P06753 285 aa5.39□□□□□ -1.55
SCN2A-205ENST00000480032 CSRNP3Q8WYN3 585 aa5.39□□□□□ -1.55
SCN2A-205ENST00000480032 CWC15Q9P013 229 aaKnown RBP5.39□□□□□ -1.55
SCN2A-205ENST00000480032 SH3BGRP55822 239 aaPredicted RBP5.38□□□□□ -1.55
SCN2A-205ENST00000480032 CALD1Q05682 793 aaKnown RBP5.38□□□□□ -1.55
SCN2A-205ENST00000480032 HIRIP3Q9BW71 556 aaPredicted RBP5.38□□□□□ -1.55
SCN2A-205ENST00000480032 TACO1Q9BSH4 297 aaKnown RBP5.38□□□□□ -1.55
SCN2A-205ENST00000480032 NPM2Q86SE8 214 aaKnown RBP5.38□□□□□ -1.55
SCN2A-205ENST00000480032 SYAP1Q96A49 352 aaPredicted RBP5.38□□□□□ -1.55
SCN2A-205ENST00000480032 APPP05067 770 aa5.38□□□□□ -1.55
SCN2A-205ENST00000480032 VSIG10Q8N0Z9 540 aa5.38□□□□□ -1.55
SCN2A-205ENST00000480032 MYH16Q9H6N6 1097 aa5.38□□□□□ -1.55
SCN2A-205ENST00000480032 MNS1Q8NEH6 495 aa5.37□□□□□ -1.55
SCN2A-205ENST00000480032 KIAA2012Q0VF49 1180 aa5.37□□□□□ -1.55
SCN2A-205ENST00000480032 WRNQ14191 1432 aaPredicted RBP eCLIP5.37□□□□□ -1.55
SCN2A-205ENST00000480032 KTN1Q86UP2 1357 aaKnown RBP5.37□□□□□ -1.55
SCN2A-205ENST00000480032 FAM107BQ9H098 131 aa5.37□□□□□ -1.55
SCN2A-205ENST00000480032 HS1BP3Q53T59 392 aa5.37□□□□□ -1.55
SCN2A-205ENST00000480032 DDX11L8A8MPP1 907 aa5.37□□□□□ -1.55
SCN2A-205ENST00000480032 DNTTIP2Q5QJE6 756 aaKnown RBP5.37□□□□□ -1.55
SCN2A-205ENST00000480032 CEP120Q8N960 986 aa5.36□□□□□ -1.55
SCN2A-205ENST00000480032 HSPA5P11021 654 aaKnown RBP5.36□□□□□ -1.55
SCN2A-205ENST00000480032 FKBP8Q14318 412 aa5.36□□□□□ -1.55
SCN2A-205ENST00000480032 PSMD1Q99460 953 aa5.36□□□□□ -1.55
SCN2A-205ENST00000480032 ZBTB7CA1YPR0 619 aa5.36□□□□□ -1.55
SCN2A-205ENST00000480032 CC2D1BQ5T0F9 858 aaKnown RBP5.36□□□□□ -1.55
SCN2A-205ENST00000480032 KIF3AQ9Y496 699 aa5.36□□□□□ -1.55
SCN2A-205ENST00000480032 TSHZ2Q9NRE2 1034 aa5.36□□□□□ -1.55
SCN2A-205ENST00000480032 NINLQ9Y2I6 1382 aa5.36□□□□□ -1.55
SCN2A-205ENST00000480032 PDE3BQ13370 1112 aa5.35□□□□□ -1.55
SCN2A-205ENST00000480032 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.35□□□□□ -1.55
SCN2A-205ENST00000480032 NEFHP12036 1026 aa5.35□□□□□ -1.55
SCN2A-205ENST00000480032 GBP4Q96PP9 640 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms