RNA–Protein interactions for RNA: ENST00000479515.1

PHTF2-212, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 5

Gene PHTF2, Length 2,467 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-212ENST00000479515 SPDYE1Q8NFV5 336 aaPredicted RBP9.11□□□□□ -0.95
PHTF2-212ENST00000479515 DCAF8Q5TAQ9 597 aa9.11□□□□□ -0.95
PHTF2-212ENST00000479515 DCAF1Q9Y4B6 1507 aa9.09□□□□□ -0.95
PHTF2-212ENST00000479515 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
PHTF2-212ENST00000479515 RNF25Q96BH1 459 aaPredicted RBP9.08□□□□□ -0.96
PHTF2-212ENST00000479515 RBM42Q9BTD8 480 aaKnown RBP9.08□□□□□ -0.96
PHTF2-212ENST00000479515 PRR29P0C7W0 189 aa9.07□□□□□ -0.96
PHTF2-212ENST00000479515 NUBP1P53384 320 aa9.06□□□□□ -0.96
PHTF2-212ENST00000479515 FAM212AQ96EL1 285 aa9.06□□□□□ -0.96
PHTF2-212ENST00000479515 AKT1S1Q96B36 256 aa9.05□□□□□ -0.96
PHTF2-212ENST00000479515 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
PHTF2-212ENST00000479515 RIOK3O14730 519 aaKnown RBP9.04□□□□□ -0.96
PHTF2-212ENST00000479515 MYO15BQ96JP2 1530 aa9.03□□□□□ -0.96
PHTF2-212ENST00000479515 ABCC9O60706 1549 aa9.02□□□□□ -0.96
PHTF2-212ENST00000479515 STK25O00506 426 aa9.02□□□□□ -0.97
PHTF2-212ENST00000479515 CREBZFQ9NS37 354 aa8.99□□□□□ -0.97
PHTF2-212ENST00000479515 NBR1Q14596 966 aa8.98□□□□□ -0.97
PHTF2-212ENST00000479515 REM2Q8IYK8 340 aaPredicted RBP8.98□□□□□ -0.97
PHTF2-212ENST00000479515 NACADO15069 1562 aa8.96□□□□□ -0.97
PHTF2-212ENST00000479515 NKX1-1Q15270 411 aaPredicted RBP8.96□□□□□ -0.98
PHTF2-212ENST00000479515 VGFO15240 615 aaPredicted RBP8.95□□□□□ -0.98
PHTF2-212ENST00000479515 RASEFQ8IZ41 740 aa8.95□□□□□ -0.98
PHTF2-212ENST00000479515 MNX1P50219 401 aaPredicted RBP8.95□□□□□ -0.98
PHTF2-212ENST00000479515 DNAJC5Q9H3Z4 198 aa8.94□□□□□ -0.98
PHTF2-212ENST00000479515 PYGBP11216 843 aa8.93□□□□□ -0.98
PHTF2-212ENST00000479515 STK24Q9Y6E0 443 aa8.92□□□□□ -0.98
PHTF2-212ENST00000479515 GTPBP6O43824 516 aaPredicted RBP8.92□□□□□ -0.98
PHTF2-212ENST00000479515 BCL11BQ9C0K0 894 aaPredicted RBP8.92□□□□□ -0.98
PHTF2-212ENST00000479515 RB1CC1Q8TDY2 1594 aa8.9□□□□□ -0.99
PHTF2-212ENST00000479515 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.89□□□□□ -0.99
PHTF2-212ENST00000479515 ZFP91Q96JP5 570 aaPredicted RBP8.89□□□□□ -0.99
PHTF2-212ENST00000479515 CHRM1P11229 460 aaPredicted RBP8.89□□□□□ -0.99
PHTF2-212ENST00000479515 PITPNM1O00562 1244 aa8.88□□□□□ -0.99
PHTF2-212ENST00000479515 RYDENQ9NUL5 291 aaKnown RBP8.87□□□□□ -0.99
PHTF2-212ENST00000479515 TSPYL2Q9H2G4 693 aaPredicted RBP8.83□□□□□ -1
PHTF2-212ENST00000479515 CHADLQ6NUI6 762 aa8.81□□□□□ -1
PHTF2-212ENST00000479515 SGIP1Q9BQI5 828 aa8.81□□□□□ -1
PHTF2-212ENST00000479515 ZNF467Q7Z7K2 595 aaPredicted RBP8.78□□□□□ -1
PHTF2-212ENST00000479515 FARP1Q9Y4F1 1045 aaPredicted RBP8.74□□□□□ -1.01
PHTF2-212ENST00000479515 SCRIBQ14160 1630 aa8.73□□□□□ -1.01
PHTF2-212ENST00000479515 PDAP1Q13442 181 aaKnown RBP8.73□□□□□ -1.01
PHTF2-212ENST00000479515 PCDHB8Q9UN66 801 aa8.73□□□□□ -1.01
PHTF2-212ENST00000479515 PCDHB13Q9Y5F0 798 aa8.73□□□□□ -1.01
PHTF2-212ENST00000479515 P3H3Q8IVL6 736 aa8.72□□□□□ -1.01
PHTF2-212ENST00000479515 WDR70Q9NW82 654 aa8.72□□□□□ -1.01
PHTF2-212ENST00000479515 UNC13AQ9UPW8 1703 aa8.71□□□□□ -1.02
PHTF2-212ENST00000479515 PRKAR2AP13861 404 aaKnown RBP8.69□□□□□ -1.02
PHTF2-212ENST00000479515 SHROOM4Q9ULL8 1493 aa8.67□□□□□ -1.02
PHTF2-212ENST00000479515 PAK3O75914 559 aaPredicted RBP8.66□□□□□ -1.02
PHTF2-212ENST00000479515 PSEN1P49768 467 aa8.66□□□□□ -1.02
PHTF2-212ENST00000479515 CCDC61Q9Y6R9 512 aa8.66□□□□□ -1.02
PHTF2-212ENST00000479515 CADPS2Q86UW7 1296 aa8.64□□□□□ -1.03
PHTF2-212ENST00000479515 KCNV2Q8TDN2 545 aa8.63□□□□□ -1.03
PHTF2-212ENST00000479515 ZNF579Q8NAF0 562 aaKnown RBP8.63□□□□□ -1.03
PHTF2-212ENST00000479515 MFRPQ9BY79 579 aa8.63□□□□□ -1.03
PHTF2-212ENST00000479515 IFNL1Q8IU54 200 aa8.6□□□□□ -1.03
PHTF2-212ENST00000479515 CABP2Q9NPB3 220 aa8.6□□□□□ -1.03
PHTF2-212ENST00000479515 BICRAQ9NZM4 1560 aa8.59□□□□□ -1.03
PHTF2-212ENST00000479515 MAP3K13O43283 966 aa8.58□□□□□ -1.04
PHTF2-212ENST00000479515 EFCAB3Q8N7B9 438 aa8.58□□□□□ -1.04
PHTF2-212ENST00000479515 TULP1O00294 542 aaPredicted RBP8.57□□□□□ -1.04
PHTF2-212ENST00000479515 FXR2P51116 673 aaKnown RBP eCLIP8.56□□□□□ -1.04
PHTF2-212ENST00000479515 NLRP6P59044 892 aa8.56□□□□□ -1.04
PHTF2-212ENST00000479515 PPP1R37O75864 691 aa8.55□□□□□ -1.04
PHTF2-212ENST00000479515 LMOD2Q6P5Q4 547 aa8.55□□□□□ -1.04
PHTF2-212ENST00000479515 KIF12Q96FN5 646 aa8.54□□□□□ -1.04
PHTF2-212ENST00000479515 PHF8Q9UPP1 1060 aa8.54□□□□□ -1.04
PHTF2-212ENST00000479515 SOX12O15370 315 aa8.53□□□□□ -1.04
PHTF2-212ENST00000479515 E2F4Q16254 413 aa8.52□□□□□ -1.05
PHTF2-212ENST00000479515 CHRDL2Q6WN34 429 aa8.52□□□□□ -1.05
PHTF2-212ENST00000479515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
PHTF2-212ENST00000479515 FBXO22Q8NEZ5 403 aa8.52□□□□□ -1.05
PHTF2-212ENST00000479515 GOLGA2Q08379 1002 aa8.51□□□□□ -1.05
PHTF2-212ENST00000479515 ARHGEF1Q92888 912 aaKnown RBP8.51□□□□□ -1.05
PHTF2-212ENST00000479515 ZRANB1Q9UGI0 708 aa8.5□□□□□ -1.05
PHTF2-212ENST00000479515 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
PHTF2-212ENST00000479515 CD44P16070 742 aaKnown RBP8.47□□□□□ -1.05
PHTF2-212ENST00000479515 LARP6Q9BRS8 491 aaKnown RBP8.46□□□□□ -1.05
PHTF2-212ENST00000479515 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.05
PHTF2-212ENST00000479515 SEMA3EO15041 775 aa8.46□□□□□ -1.06
PHTF2-212ENST00000479515 PHF12Q96QT6 1004 aa8.45□□□□□ -1.06
PHTF2-212ENST00000479515 BAZ1AQ9NRL2 1556 aaPredicted RBP8.44□□□□□ -1.06
PHTF2-212ENST00000479515 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
PHTF2-212ENST00000479515 PDE4AP27815 886 aa8.43□□□□□ -1.06
PHTF2-212ENST00000479515 TMEM132AQ24JP5 1023 aa8.43□□□□□ -1.06
PHTF2-212ENST00000479515 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
PHTF2-212ENST00000479515 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
PHTF2-212ENST00000479515 SMARCA4P51532 1647 aa8.42□□□□□ -1.06
PHTF2-212ENST00000479515 MKRN3Q13064 507 aaKnown RBP8.41□□□□□ -1.06
PHTF2-212ENST00000479515 DDX27Q96GQ7 796 aaKnown RBP8.41□□□□□ -1.06
PHTF2-212ENST00000479515 MS4A4AQ96JQ5 239 aa8.41□□□□□ -1.06
PHTF2-212ENST00000479515 CECR2Q9BXF3 1484 aa8.4□□□□□ -1.06
PHTF2-212ENST00000479515 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.07
PHTF2-212ENST00000479515 TESPA1A2RU30 521 aaPredicted RBP8.39□□□□□ -1.07
PHTF2-212ENST00000479515 SMYD5Q6GMV2 418 aa8.38□□□□□ -1.07
PHTF2-212ENST00000479515 RSF1Q96T23 1441 aaPredicted RBP8.38□□□□□ -1.07
PHTF2-212ENST00000479515 MROH2BQ7Z745 1585 aa8.37□□□□□ -1.07
PHTF2-212ENST00000479515 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
PHTF2-212ENST00000479515 MS4A3Q96HJ5 214 aa8.36□□□□□ -1.07
PHTF2-212ENST00000479515 PEG3Q9GZU2 1588 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms