RNA–Protein interactions for RNA: ENST00000478946.1

STAMBP-208, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-208ENST00000478946 NUBP1P53384 320 aa16.29■□□□□ 0.2
STAMBP-208ENST00000478946 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
STAMBP-208ENST00000478946 RIOK3O14730 519 aaKnown RBP16.24■□□□□ 0.19
STAMBP-208ENST00000478946 GTPBP6O43824 516 aaPredicted RBP16.22■□□□□ 0.19
STAMBP-208ENST00000478946 DCAF8Q5TAQ9 597 aa16.18■□□□□ 0.18
STAMBP-208ENST00000478946 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
STAMBP-208ENST00000478946 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
STAMBP-208ENST00000478946 CHRM1P11229 460 aaPredicted RBP16.11■□□□□ 0.17
STAMBP-208ENST00000478946 STK25O00506 426 aa16.1■□□□□ 0.17
STAMBP-208ENST00000478946 FAM212AQ96EL1 285 aa16.09■□□□□ 0.17
STAMBP-208ENST00000478946 SGIP1Q9BQI5 828 aa16.09■□□□□ 0.17
STAMBP-208ENST00000478946 SPDYE1Q8NFV5 336 aaPredicted RBP16.06■□□□□ 0.16
STAMBP-208ENST00000478946 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
STAMBP-208ENST00000478946 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
STAMBP-208ENST00000478946 RYDENQ9NUL5 291 aaKnown RBP16.02■□□□□ 0.16
STAMBP-208ENST00000478946 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
STAMBP-208ENST00000478946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.94■□□□□ 0.14
STAMBP-208ENST00000478946 PRR29P0C7W0 189 aa15.94■□□□□ 0.14
STAMBP-208ENST00000478946 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
STAMBP-208ENST00000478946 ZFP91Q96JP5 570 aaPredicted RBP15.94■□□□□ 0.14
STAMBP-208ENST00000478946 STK24Q9Y6E0 443 aa15.94■□□□□ 0.14
STAMBP-208ENST00000478946 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
STAMBP-208ENST00000478946 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
STAMBP-208ENST00000478946 CLEC11AQ9Y240 323 aa15.87■□□□□ 0.13
STAMBP-208ENST00000478946 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
STAMBP-208ENST00000478946 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
STAMBP-208ENST00000478946 GTF3C3Q9Y5Q9 886 aa15.85■□□□□ 0.13
STAMBP-208ENST00000478946 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
STAMBP-208ENST00000478946 PYGBP11216 843 aa15.82■□□□□ 0.12
STAMBP-208ENST00000478946 ABCC9O60706 1549 aa15.82■□□□□ 0.12
STAMBP-208ENST00000478946 TULP1O00294 542 aaPredicted RBP15.81■□□□□ 0.12
STAMBP-208ENST00000478946 TMEM132AQ24JP5 1023 aa15.77■□□□□ 0.12
STAMBP-208ENST00000478946 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
STAMBP-208ENST00000478946 ERICH6Q7L0X2 663 aa15.75■□□□□ 0.11
STAMBP-208ENST00000478946 WDR70Q9NW82 654 aa15.69■□□□□ 0.1
STAMBP-208ENST00000478946 ZNF467Q7Z7K2 595 aaPredicted RBP15.67■□□□□ 0.1
STAMBP-208ENST00000478946 CADPS2Q86UW7 1296 aa15.67■□□□□ 0.1
STAMBP-208ENST00000478946 KCNV2Q8TDN2 545 aa15.67■□□□□ 0.1
STAMBP-208ENST00000478946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.65■□□□□ 0.1
STAMBP-208ENST00000478946 LMOD2Q6P5Q4 547 aa15.62■□□□□ 0.09
STAMBP-208ENST00000478946 PDAP1Q13442 181 aaKnown RBP15.6■□□□□ 0.09
STAMBP-208ENST00000478946 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
STAMBP-208ENST00000478946 MFRPQ9BY79 579 aa15.52■□□□□ 0.08
STAMBP-208ENST00000478946 TSPYL2Q9H2G4 693 aaPredicted RBP15.51■□□□□ 0.07
STAMBP-208ENST00000478946 ARHGEF1Q92888 912 aaKnown RBP15.49■□□□□ 0.07
STAMBP-208ENST00000478946 PCDHB8Q9UN66 801 aa15.48■□□□□ 0.07
STAMBP-208ENST00000478946 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
STAMBP-208ENST00000478946 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.07
STAMBP-208ENST00000478946 PSEN1P49768 467 aa15.45■□□□□ 0.06
STAMBP-208ENST00000478946 ARXQ96QS3 562 aa15.45■□□□□ 0.06
STAMBP-208ENST00000478946 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
STAMBP-208ENST00000478946 BRPF1P55201 1214 aaPredicted RBP15.42■□□□□ 0.06
STAMBP-208ENST00000478946 FARP1Q9Y4F1 1045 aaPredicted RBP15.41■□□□□ 0.06
STAMBP-208ENST00000478946 CCDC61Q9Y6R9 512 aa15.41■□□□□ 0.06
STAMBP-208ENST00000478946 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
STAMBP-208ENST00000478946 E2F4Q16254 413 aa15.39■□□□□ 0.05
STAMBP-208ENST00000478946 ZC3H15Q8WU90 426 aaKnown RBP15.38■□□□□ 0.05
STAMBP-208ENST00000478946 PPP1R37O75864 691 aa15.37■□□□□ 0.05
STAMBP-208ENST00000478946 C14orf37Q86TY3 774 aa15.37■□□□□ 0.05
STAMBP-208ENST00000478946 FBXO22Q8NEZ5 403 aa15.36■□□□□ 0.05
STAMBP-208ENST00000478946 TESPA1A2RU30 521 aaPredicted RBP15.35■□□□□ 0.05
STAMBP-208ENST00000478946 NLRP6P59044 892 aa15.34■□□□□ 0.05
STAMBP-208ENST00000478946 SOX12O15370 315 aa15.33■□□□□ 0.04
STAMBP-208ENST00000478946 SEMA3EO15041 775 aa15.3■□□□□ 0.04
STAMBP-208ENST00000478946 EFCAB3Q8N7B9 438 aa15.3■□□□□ 0.04
STAMBP-208ENST00000478946 IFNL1Q8IU54 200 aa15.26■□□□□ 0.03
STAMBP-208ENST00000478946 PHF8Q9UPP1 1060 aa15.25■□□□□ 0.03
STAMBP-208ENST00000478946 SLC24A3Q9HC58 644 aa15.24■□□□□ 0.03
STAMBP-208ENST00000478946 CABP2Q9NPB3 220 aa15.24■□□□□ 0.03
STAMBP-208ENST00000478946 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
STAMBP-208ENST00000478946 NCKAP5LQ9HCH0 1330 aa15.21■□□□□ 0.03
STAMBP-208ENST00000478946 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
STAMBP-208ENST00000478946 ZMYND10O75800 440 aa15.19■□□□□ 0.02
STAMBP-208ENST00000478946 MFSD10Q14728 455 aa15.19■□□□□ 0.02
STAMBP-208ENST00000478946 SMYD5Q6GMV2 418 aa15.19■□□□□ 0.02
STAMBP-208ENST00000478946 MAP3K13O43283 966 aa15.18■□□□□ 0.02
STAMBP-208ENST00000478946 PDE4AP27815 886 aa15.18■□□□□ 0.02
STAMBP-208ENST00000478946 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
STAMBP-208ENST00000478946 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
STAMBP-208ENST00000478946 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
STAMBP-208ENST00000478946 LARP6Q9BRS8 491 aaKnown RBP15.16■□□□□ 0.02
STAMBP-208ENST00000478946 HOMEZQ8IX15 550 aa15.13■□□□□ 0.01
STAMBP-208ENST00000478946 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
STAMBP-208ENST00000478946 MS4A4AQ96JQ5 239 aa15.1■□□□□ 0.01
STAMBP-208ENST00000478946 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.017e-8■■■□□ 15.4
STAMBP-208ENST00000478946 CAMK2BQ13554 666 aa15.09■□□□□ 0.01
STAMBP-208ENST00000478946 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
STAMBP-208ENST00000478946 DDX27Q96GQ7 796 aaKnown RBP15.08■□□□□ 0
STAMBP-208ENST00000478946 DAXXQ9UER7 740 aaPredicted RBP15.06■□□□□ 0
STAMBP-208ENST00000478946 AK7Q96M32 723 aa14.98□□□□□ -0.01
STAMBP-208ENST00000478946 GOLGA2Q08379 1002 aa14.92□□□□□ -0.02
STAMBP-208ENST00000478946 GPIHBP1Q8IV16 184 aa14.92□□□□□ -0.02
STAMBP-208ENST00000478946 RBM26Q5T8P6 1007 aaKnown RBP14.91□□□□□ -0.02
STAMBP-208ENST00000478946 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
STAMBP-208ENST00000478946 MLLT3P42568 568 aaPredicted RBP14.9□□□□□ -0.02
STAMBP-208ENST00000478946 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
STAMBP-208ENST00000478946 TMEM106CQ9BVX2 250 aa14.88□□□□□ -0.03
STAMBP-208ENST00000478946 RB1CC1Q8TDY2 1594 aa14.88□□□□□ -0.03
STAMBP-208ENST00000478946 KRI1Q8N9T8 703 aaKnown RBP14.86□□□□□ -0.03
STAMBP-208ENST00000478946 GPBP1L1Q9HC44 474 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms