RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 ATMINO43313 823 aaPredicted RBP9.49□□□□□ -0.89
SUPT20H-215ENST00000478911 SLC39A7Q92504 469 aa9.49□□□□□ -0.89
SUPT20H-215ENST00000478911 C7P10643 843 aa9.47□□□□□ -0.89
SUPT20H-215ENST00000478911 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
SUPT20H-215ENST00000478911 TSPYL2Q9H2G4 693 aaPredicted RBP9.46□□□□□ -0.9
SUPT20H-215ENST00000478911 MAMSTRQ6ZN01 415 aa9.43□□□□□ -0.9
SUPT20H-215ENST00000478911 POTEJP0CG39 1038 aa9.42□□□□□ -0.9
SUPT20H-215ENST00000478911 CCDC61Q9Y6R9 512 aa9.41□□□□□ -0.9
SUPT20H-215ENST00000478911 ATN1P54259 1190 aaPredicted RBP9.4□□□□□ -0.9
SUPT20H-215ENST00000478911 PROM2Q8N271 834 aa9.4□□□□□ -0.9
SUPT20H-215ENST00000478911 FKBP8Q14318 412 aa9.38□□□□□ -0.91
SUPT20H-215ENST00000478911 KIF12Q96FN5 646 aa9.38□□□□□ -0.91
SUPT20H-215ENST00000478911 SCUBE2Q9NQ36 999 aa9.37□□□□□ -0.91
SUPT20H-215ENST00000478911 PCDH10Q9P2E7 1040 aa9.36□□□□□ -0.91
SUPT20H-215ENST00000478911 BMP2KQ9NSY1 1161 aaPredicted RBP9.34□□□□□ -0.91
SUPT20H-215ENST00000478911 PLEKHG5O94827 1062 aa9.33□□□□□ -0.92
SUPT20H-215ENST00000478911 FAM163AQ96GL9 167 aaPredicted RBP9.32□□□□□ -0.92
SUPT20H-215ENST00000478911 TRPC6Q9Y210 931 aa9.32□□□□□ -0.92
SUPT20H-215ENST00000478911 MAP3K13O43283 966 aa9.31□□□□□ -0.92
SUPT20H-215ENST00000478911 POTEFA5A3E0 1075 aa9.3□□□□□ -0.92
SUPT20H-215ENST00000478911 TIE1P35590 1138 aa9.3□□□□□ -0.92
SUPT20H-215ENST00000478911 LCE2DQ5TA82 110 aaPredicted RBP9.3□□□□□ -0.92
SUPT20H-215ENST00000478911 MIER1Q8N108 512 aa9.3□□□□□ -0.92
SUPT20H-215ENST00000478911 RASEFQ8IZ41 740 aa9.29□□□□□ -0.92
SUPT20H-215ENST00000478911 TTLL13PA6NNM8 815 aa9.24□□□□□ -0.93
SUPT20H-215ENST00000478911 SEC24BO95487 1268 aa9.24□□□□□ -0.93
SUPT20H-215ENST00000478911 COLQQ9Y215 455 aaPredicted RBP9.23□□□□□ -0.93
SUPT20H-215ENST00000478911 PLCD3Q8N3E9 789 aa9.2□□□□□ -0.94
SUPT20H-215ENST00000478911 SGIP1Q9BQI5 828 aa9.19□□□□□ -0.94
SUPT20H-215ENST00000478911 TRIM35Q9UPQ4 493 aa9.19□□□□□ -0.94
SUPT20H-215ENST00000478911 PCDHB13Q9Y5F0 798 aa9.19□□□□□ -0.94
SUPT20H-215ENST00000478911 IER5LQ5T953 404 aa9.18□□□□□ -0.94
SUPT20H-215ENST00000478911 ZBTB47Q9UFB7 747 aaPredicted RBP9.15□□□□□ -0.94
SUPT20H-215ENST00000478911 NUBP1P53384 320 aa9.13□□□□□ -0.95
SUPT20H-215ENST00000478911 IFNL1Q8IU54 200 aa9.12□□□□□ -0.95
SUPT20H-215ENST00000478911 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
SUPT20H-215ENST00000478911 SLAIN1Q8ND83 568 aa9.11□□□□□ -0.95
SUPT20H-215ENST00000478911 FAM212AQ96EL1 285 aa9.1□□□□□ -0.95
SUPT20H-215ENST00000478911 TMEM106CQ9BVX2 250 aa9.1□□□□□ -0.95
SUPT20H-215ENST00000478911 PLCG2P16885 1265 aa9.09□□□□□ -0.95
SUPT20H-215ENST00000478911 ST18O60284 1047 aa9.06□□□□□ -0.96
SUPT20H-215ENST00000478911 IRX5P78411 483 aaPredicted RBP9.03□□□□□ -0.96
SUPT20H-215ENST00000478911 AMER1Q5JTC6 1135 aaPredicted RBP9.01□□□□□ -0.97
SUPT20H-215ENST00000478911 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
SUPT20H-215ENST00000478911 OCEL1Q9H607 264 aa8.99□□□□□ -0.97
SUPT20H-215ENST00000478911 DCAF8Q5TAQ9 597 aa8.98□□□□□ -0.97
SUPT20H-215ENST00000478911 PYGBP11216 843 aa8.97□□□□□ -0.97
SUPT20H-215ENST00000478911 TMEM121BQ9BXQ6 578 aaPredicted RBP8.96□□□□□ -0.98
SUPT20H-215ENST00000478911 FBXO3Q9UK99 471 aa8.96□□□□□ -0.98
SUPT20H-215ENST00000478911 SNPHO15079 494 aa8.95□□□□□ -0.98
SUPT20H-215ENST00000478911 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.94□□□□□ -0.98
SUPT20H-215ENST00000478911 PCDHB8Q9UN66 801 aa8.94□□□□□ -0.98
SUPT20H-215ENST00000478911 MMRN1Q13201 1228 aa8.89□□□□□ -0.99
SUPT20H-215ENST00000478911 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
SUPT20H-215ENST00000478911 MARVELD3Q96A59 401 aa8.89□□□□□ -0.99
SUPT20H-215ENST00000478911 GOLGA2Q08379 1002 aa8.86□□□□□ -0.99
SUPT20H-215ENST00000478911 C3orf67Q6ZVT6 689 aa8.86□□□□□ -0.99
SUPT20H-215ENST00000478911 PDCD7Q8N8D1 485 aaKnown RBP8.86□□□□□ -0.99
SUPT20H-215ENST00000478911 VASPP50552 380 aaPredicted RBP8.85□□□□□ -0.99
SUPT20H-215ENST00000478911 ZNF467Q7Z7K2 595 aaPredicted RBP8.85□□□□□ -0.99
SUPT20H-215ENST00000478911 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
SUPT20H-215ENST00000478911 L3MBTL3Q96JM7 780 aaPredicted RBP8.83□□□□□ -1
SUPT20H-215ENST00000478911 EMP3P54852 163 aa8.82□□□□□ -1
SUPT20H-215ENST00000478911 GSE1Q14687 1217 aa8.82□□□□□ -1
SUPT20H-215ENST00000478911 KLHL34Q8N239 644 aa8.81□□□□□ -1
SUPT20H-215ENST00000478911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -11e-10■■□□□ 12.2
SUPT20H-215ENST00000478911 PSEN1P49768 467 aa8.77□□□□□ -1.01
SUPT20H-215ENST00000478911 CHRM1P11229 460 aaPredicted RBP8.76□□□□□ -1.01
SUPT20H-215ENST00000478911 IFNLR1Q8IU57 520 aaPredicted RBP8.75□□□□□ -1.01
SUPT20H-215ENST00000478911 HS3ST6Q96QI5 342 aa8.75□□□□□ -1.01
SUPT20H-215ENST00000478911 FAM205CA6NFA0 338 aa8.74□□□□□ -1.01
SUPT20H-215ENST00000478911 POTEB3A0JP26 581 aa8.73□□□□□ -1.01
SUPT20H-215ENST00000478911 POTEBQ6S5H4 581 aa8.73□□□□□ -1.01
SUPT20H-215ENST00000478911 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
SUPT20H-215ENST00000478911 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
SUPT20H-215ENST00000478911 PDAP1Q13442 181 aaKnown RBP8.71□□□□□ -1.02
SUPT20H-215ENST00000478911 ILDR1Q86SU0 546 aaPredicted RBP8.7□□□□□ -1.02
SUPT20H-215ENST00000478911 G3V3G9 751 aa8.69□□□□□ -1.02
SUPT20H-215ENST00000478911 DPY19L2Q6NUT2 758 aa8.69□□□□□ -1.02
SUPT20H-215ENST00000478911 CABP2Q9NPB3 220 aa8.67□□□□□ -1.02
SUPT20H-215ENST00000478911 BOLA1Q9Y3E2 137 aa8.66□□□□□ -1.02
SUPT20H-215ENST00000478911 HOXB3P14651 431 aaPredicted RBP8.64□□□□□ -1.03
SUPT20H-215ENST00000478911 ZNF710Q8N1W2 664 aa8.63□□□□□ -1.03
SUPT20H-215ENST00000478911 CIZ1Q9ULV3 898 aaPredicted RBP8.63□□□□□ -1.03
SUPT20H-215ENST00000478911 HOXB1P14653 301 aaPredicted RBP8.61□□□□□ -1.03
SUPT20H-215ENST00000478911 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
SUPT20H-215ENST00000478911 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
SUPT20H-215ENST00000478911 ERBB3P21860 1342 aa8.59□□□□□ -1.03
SUPT20H-215ENST00000478911 PKD2Q13563 968 aa8.57□□□□□ -1.04
SUPT20H-215ENST00000478911 SLC24A1O60721 1099 aa8.56□□□□□ -1.04
SUPT20H-215ENST00000478911 RIMBP2O15034 1052 aa8.55□□□□□ -1.04
SUPT20H-215ENST00000478911 EFCAB3Q8N7B9 438 aa8.53□□□□□ -1.04
SUPT20H-215ENST00000478911 RNF166Q96A37 237 aaPredicted RBP8.53□□□□□ -1.04
SUPT20H-215ENST00000478911 VARS2Q5ST30 1063 aaKnown RBP8.52□□□□□ -1.05
SUPT20H-215ENST00000478911 MICALL2Q8IY33 904 aa8.49□□□□□ -1.05
SUPT20H-215ENST00000478911 MYT1LQ9UL68 1186 aa8.49□□□□□ -1.05
SUPT20H-215ENST00000478911 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
SUPT20H-215ENST00000478911 ZSWIM6Q9HCJ5 1215 aa8.48□□□□□ -1.05
SUPT20H-215ENST00000478911 TMEM92Q6UXU6 159 aa8.47□□□□□ -1.05
SUPT20H-215ENST00000478911 ZNF687Q8N1G0 1237 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms