RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
HOXB3-209ENST00000478644 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
HOXB3-209ENST00000478644 TSPYL2Q9H2G4 693 aaPredicted RBP13.21□□□□□ -0.29
HOXB3-209ENST00000478644 RB1CC1Q8TDY2 1594 aa13.16□□□□□ -0.3
HOXB3-209ENST00000478644 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
HOXB3-209ENST00000478644 POTEIP0CG38 1075 aa13.14□□□□□ -0.31
HOXB3-209ENST00000478644 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
HOXB3-209ENST00000478644 NACADO15069 1562 aa13.1□□□□□ -0.31
HOXB3-209ENST00000478644 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
HOXB3-209ENST00000478644 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
HOXB3-209ENST00000478644 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
HOXB3-209ENST00000478644 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
HOXB3-209ENST00000478644 MS4A3Q96HJ5 214 aa13.07□□□□□ -0.32
HOXB3-209ENST00000478644 SGIP1Q9BQI5 828 aa13.05□□□□□ -0.32
HOXB3-209ENST00000478644 MAP3K13O43283 966 aa13.03□□□□□ -0.32
HOXB3-209ENST00000478644 MYO15BQ96JP2 1530 aa13□□□□□ -0.33
HOXB3-209ENST00000478644 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
HOXB3-209ENST00000478644 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
HOXB3-209ENST00000478644 GSE1Q14687 1217 aa12.98□□□□□ -0.33
HOXB3-209ENST00000478644 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
HOXB3-209ENST00000478644 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
HOXB3-209ENST00000478644 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
HOXB3-209ENST00000478644 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
HOXB3-209ENST00000478644 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
HOXB3-209ENST00000478644 TIE1P35590 1138 aa12.91□□□□□ -0.34
HOXB3-209ENST00000478644 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
HOXB3-209ENST00000478644 TRPC6Q9Y210 931 aa12.89□□□□□ -0.35
HOXB3-209ENST00000478644 PYGBP11216 843 aa12.88□□□□□ -0.35
HOXB3-209ENST00000478644 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
HOXB3-209ENST00000478644 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
HOXB3-209ENST00000478644 LHX8Q68G74 356 aa12.86□□□□□ -0.35
HOXB3-209ENST00000478644 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
HOXB3-209ENST00000478644 TTLL13PA6NNM8 815 aa12.81□□□□□ -0.36
HOXB3-209ENST00000478644 C7P10643 843 aa12.81□□□□□ -0.36
HOXB3-209ENST00000478644 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
HOXB3-209ENST00000478644 DCAF1Q9Y4B6 1507 aa12.81□□□□□ -0.36
HOXB3-209ENST00000478644 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
HOXB3-209ENST00000478644 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
HOXB3-209ENST00000478644 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
HOXB3-209ENST00000478644 METRNQ9UJH8 293 aa12.75□□□□□ -0.37
HOXB3-209ENST00000478644 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
HOXB3-209ENST00000478644 ZCCHC6Q5VYS8 1495 aaKnown RBP12.73□□□□□ -0.37
HOXB3-209ENST00000478644 SHROOM4Q9ULL8 1493 aa12.72□□□□□ -0.37
HOXB3-209ENST00000478644 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
HOXB3-209ENST00000478644 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
HOXB3-209ENST00000478644 IER5LQ5T953 404 aa12.71□□□□□ -0.37
HOXB3-209ENST00000478644 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
HOXB3-209ENST00000478644 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
HOXB3-209ENST00000478644 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
HOXB3-209ENST00000478644 BICRAQ9NZM4 1560 aa12.63□□□□□ -0.39
HOXB3-209ENST00000478644 PSEN1P49768 467 aa12.62□□□□□ -0.39
HOXB3-209ENST00000478644 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
HOXB3-209ENST00000478644 POTEJP0CG39 1038 aa12.6□□□□□ -0.39
HOXB3-209ENST00000478644 COLQQ9Y215 455 aaPredicted RBP12.6□□□□□ -0.39
HOXB3-209ENST00000478644 OTUD5Q96G74 571 aa12.59□□□□□ -0.39
HOXB3-209ENST00000478644 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
HOXB3-209ENST00000478644 SEC24BO95487 1268 aa12.56□□□□□ -0.4
HOXB3-209ENST00000478644 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
HOXB3-209ENST00000478644 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
HOXB3-209ENST00000478644 OCEL1Q9H607 264 aa12.52□□□□□ -0.41
HOXB3-209ENST00000478644 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
HOXB3-209ENST00000478644 PKD2Q13563 968 aa12.51□□□□□ -0.41
HOXB3-209ENST00000478644 PLCG2P16885 1265 aa12.49□□□□□ -0.41
HOXB3-209ENST00000478644 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
HOXB3-209ENST00000478644 VGFO15240 615 aaPredicted RBP12.47□□□□□ -0.41
HOXB3-209ENST00000478644 GOLGA2Q08379 1002 aa12.47□□□□□ -0.41
HOXB3-209ENST00000478644 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
HOXB3-209ENST00000478644 SCRIBQ14160 1630 aa12.45□□□□□ -0.42
HOXB3-209ENST00000478644 ECM2O94769 699 aaPredicted RBP12.44□□□□□ -0.42
HOXB3-209ENST00000478644 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
HOXB3-209ENST00000478644 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
HOXB3-209ENST00000478644 CABP2Q9NPB3 220 aa12.43□□□□□ -0.42
HOXB3-209ENST00000478644 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
HOXB3-209ENST00000478644 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
HOXB3-209ENST00000478644 ZFP91Q96JP5 570 aaPredicted RBP12.4□□□□□ -0.42
HOXB3-209ENST00000478644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.43
HOXB3-209ENST00000478644 EIF4G1Q04637 1599 aaKnown RBP12.38□□□□□ -0.43
HOXB3-209ENST00000478644 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
HOXB3-209ENST00000478644 CECR2Q9BXF3 1484 aa12.37□□□□□ -0.43
HOXB3-209ENST00000478644 RGL2O15211 777 aa12.35□□□□□ -0.43
HOXB3-209ENST00000478644 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
HOXB3-209ENST00000478644 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
HOXB3-209ENST00000478644 SOX12O15370 315 aa12.32□□□□□ -0.44
HOXB3-209ENST00000478644 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
HOXB3-209ENST00000478644 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
HOXB3-209ENST00000478644 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
HOXB3-209ENST00000478644 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
HOXB3-209ENST00000478644 STK25O00506 426 aa12.23□□□□□ -0.45
HOXB3-209ENST00000478644 TMEM121BQ9BXQ6 578 aaPredicted RBP12.23□□□□□ -0.45
HOXB3-209ENST00000478644 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
HOXB3-209ENST00000478644 MS4A4AQ96JQ5 239 aa12.21□□□□□ -0.45
HOXB3-209ENST00000478644 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
HOXB3-209ENST00000478644 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
HOXB3-209ENST00000478644 PHF8Q9UPP1 1060 aa12.19□□□□□ -0.46
HOXB3-209ENST00000478644 NLRP6P59044 892 aa12.18□□□□□ -0.46
HOXB3-209ENST00000478644 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
HOXB3-209ENST00000478644 LCE2DQ5TA82 110 aaPredicted RBP12.16□□□□□ -0.46
HOXB3-209ENST00000478644 MFRPQ9BY79 579 aa12.16□□□□□ -0.46
HOXB3-209ENST00000478644 G3V3G9 751 aa12.14□□□□□ -0.47
HOXB3-209ENST00000478644 HS6ST3Q8IZP7 471 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms