RNA–Protein interactions for RNA: ENST00000478631.6

SCP2-210, Transcript of sterol carrier protein 2, humanhuman

TSL 2

Gene SCP2, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-210ENST00000478631 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
SCP2-210ENST00000478631 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
SCP2-210ENST00000478631 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCP2-210ENST00000478631 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
SCP2-210ENST00000478631 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
SCP2-210ENST00000478631 PLEKHD1A6NEE1 506 aa16.21■□□□□ 0.19
SCP2-210ENST00000478631 IRX6P78412 446 aaPredicted RBP16.2■□□□□ 0.18
SCP2-210ENST00000478631 WDR43Q15061 677 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCP2-210ENST00000478631 SOGA1O94964 1423 aa16.18■□□□□ 0.18
SCP2-210ENST00000478631 KCNH8Q96L42 1107 aa16.18■□□□□ 0.18
SCP2-210ENST00000478631 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
SCP2-210ENST00000478631 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
SCP2-210ENST00000478631 RGL3Q3MIN7 710 aa16.13■□□□□ 0.17
SCP2-210ENST00000478631 SIN3AQ96ST3 1273 aa16.13■□□□□ 0.17
SCP2-210ENST00000478631 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
SCP2-210ENST00000478631 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
SCP2-210ENST00000478631 MROH2BQ7Z745 1585 aa16.1■□□□□ 0.17
SCP2-210ENST00000478631 CCNB3Q8WWL7 1395 aa16.08■□□□□ 0.16
SCP2-210ENST00000478631 HSP90AA1P07900 732 aaKnown RBP16.08■□□□□ 0.16
SCP2-210ENST00000478631 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
SCP2-210ENST00000478631 CUX2O14529 1486 aa16.05■□□□□ 0.16
SCP2-210ENST00000478631 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
SCP2-210ENST00000478631 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
SCP2-210ENST00000478631 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
SCP2-210ENST00000478631 FHAD1B1AJZ9 1412 aa16.03■□□□□ 0.16
SCP2-210ENST00000478631 CARD11Q9BXL7 1154 aa16.03■□□□□ 0.16
SCP2-210ENST00000478631 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
SCP2-210ENST00000478631 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
SCP2-210ENST00000478631 NBR1Q14596 966 aa16■□□□□ 0.15
SCP2-210ENST00000478631 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
SCP2-210ENST00000478631 KANK4Q5T7N3 995 aaPredicted RBP15.96■□□□□ 0.15
SCP2-210ENST00000478631 KNSTRNQ9Y448 316 aa15.95■□□□□ 0.14
SCP2-210ENST00000478631 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
SCP2-210ENST00000478631 PPP1R15AO75807 674 aaPredicted RBP15.93■□□□□ 0.14
SCP2-210ENST00000478631 ANP32BQ92688 251 aaKnown RBP15.92■□□□□ 0.14
SCP2-210ENST00000478631 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
SCP2-210ENST00000478631 TIMELESSQ9UNS1 1208 aa15.91■□□□□ 0.14
SCP2-210ENST00000478631 EIF4G1Q04637 1599 aaKnown RBP15.89■□□□□ 0.13
SCP2-210ENST00000478631 SETD5Q9C0A6 1442 aa15.88■□□□□ 0.13
SCP2-210ENST00000478631 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
SCP2-210ENST00000478631 MYH16Q9H6N6 1097 aa15.86■□□□□ 0.13
SCP2-210ENST00000478631 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
SCP2-210ENST00000478631 DCAF11Q8TEB1 546 aa15.84■□□□□ 0.13
SCP2-210ENST00000478631 ARHGAP35Q9NRY4 1499 aa15.83■□□□□ 0.13
SCP2-210ENST00000478631 ARXQ96QS3 562 aa15.83■□□□□ 0.12
SCP2-210ENST00000478631 WIZO95785 1651 aa15.83■□□□□ 0.12
SCP2-210ENST00000478631 NEUROD2Q15784 382 aa15.82■□□□□ 0.12
SCP2-210ENST00000478631 EIF5BO60841 1220 aaKnown RBP15.82■□□□□ 0.12
SCP2-210ENST00000478631 PPM1GO15355 546 aaPredicted RBP15.81■□□□□ 0.12
SCP2-210ENST00000478631 TDRD9Q8NDG6 1382 aaKnown RBP15.81■□□□□ 0.12
SCP2-210ENST00000478631 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
SCP2-210ENST00000478631 CC2D1BQ5T0F9 858 aaKnown RBP15.81■□□□□ 0.12
SCP2-210ENST00000478631 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
SCP2-210ENST00000478631 PPP4R2Q9NY27 417 aa15.81■□□□□ 0.12
SCP2-210ENST00000478631 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
SCP2-210ENST00000478631 RAB3GAP2Q9H2M9 1393 aa15.8■□□□□ 0.12
SCP2-210ENST00000478631 ZBTB7CA1YPR0 619 aa15.78■□□□□ 0.12
SCP2-210ENST00000478631 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
SCP2-210ENST00000478631 FOXD1Q16676 465 aa15.78■□□□□ 0.12
SCP2-210ENST00000478631 CCER2I3L3R5 266 aa15.77■□□□□ 0.11
SCP2-210ENST00000478631 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.11
SCP2-210ENST00000478631 DDRGK1Q96HY6 314 aa15.77■□□□□ 0.11
SCP2-210ENST00000478631 PKD2Q13563 968 aa15.76■□□□□ 0.11
SCP2-210ENST00000478631 ARID4BQ4LE39 1312 aaPredicted RBP15.76■□□□□ 0.11
SCP2-210ENST00000478631 TMF1P82094 1093 aa15.75■□□□□ 0.11
SCP2-210ENST00000478631 POGKQ9P215 609 aa15.75■□□□□ 0.11
SCP2-210ENST00000478631 BECN1Q14457 450 aa15.75■□□□□ 0.11
SCP2-210ENST00000478631 FMN1Q68DA7 1419 aa15.75■□□□□ 0.11
SCP2-210ENST00000478631 B4GALNT3Q6L9W6 998 aa15.74■□□□□ 0.11
SCP2-210ENST00000478631 FTSJ3Q8IY81 847 aaKnown RBP15.73■□□□□ 0.11
SCP2-210ENST00000478631 MAPK8IP3Q9UPT6 1336 aa15.73■□□□□ 0.11
SCP2-210ENST00000478631 NUDCQ9Y266 331 aa15.73■□□□□ 0.11
SCP2-210ENST00000478631 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
SCP2-210ENST00000478631 MPHOSPH9Q99550 1183 aa15.71■□□□□ 0.11
SCP2-210ENST00000478631 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.1
SCP2-210ENST00000478631 FRAT1Q92837 279 aaPredicted RBP15.71■□□□□ 0.1
SCP2-210ENST00000478631 RGS3P49796 1198 aa15.7■□□□□ 0.1
SCP2-210ENST00000478631 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
SCP2-210ENST00000478631 CADPSQ9ULU8 1353 aa15.69■□□□□ 0.1
SCP2-210ENST00000478631 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
SCP2-210ENST00000478631 ANP32EQ9BTT0 268 aa15.68■□□□□ 0.1
SCP2-210ENST00000478631 KANK1Q14678 1352 aa15.68■□□□□ 0.1
SCP2-210ENST00000478631 FHOD3Q2V2M9 1422 aa15.67■□□□□ 0.1
SCP2-210ENST00000478631 U2SURPO15042 1029 aaKnown RBP15.67■□□□□ 0.1
SCP2-210ENST00000478631 A0A0G2JS52 829 aa15.67■□□□□ 0.1
SCP2-210ENST00000478631 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
SCP2-210ENST00000478631 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
SCP2-210ENST00000478631 NUP155O75694 1391 aa15.65■□□□□ 0.1
SCP2-210ENST00000478631 GGT6Q6P531 493 aa15.62■□□□□ 0.09
SCP2-210ENST00000478631 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
SCP2-210ENST00000478631 ANKRD30AQ9BXX3 1397 aa15.61■□□□□ 0.09
SCP2-210ENST00000478631 SAFB2Q14151 953 aaKnown RBP eCLIP15.61■□□□□ 0.09
SCP2-210ENST00000478631 SRPK2P78362 688 aaKnown RBP15.6■□□□□ 0.09
SCP2-210ENST00000478631 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
SCP2-210ENST00000478631 SMARCA4P51532 1647 aa15.59■□□□□ 0.09
SCP2-210ENST00000478631 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
SCP2-210ENST00000478631 KTN1Q86UP2 1357 aaKnown RBP15.59■□□□□ 0.09
SCP2-210ENST00000478631 GOLGA6L22H0YM25 854 aa15.59■□□□□ 0.09
SCP2-210ENST00000478631 MLECQ14165 292 aa15.58■□□□□ 0.08
SCP2-210ENST00000478631 NOP58Q9Y2X3 529 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms