RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 MS4A3Q96HJ5 214 aa15.86■□□□□ 0.13
CDK13-204ENST00000478563 ASTLQ6HA08 431 aaPredicted RBP15.85■□□□□ 0.13
CDK13-204ENST00000478563 METRNQ9UJH8 293 aa15.85■□□□□ 0.13
CDK13-204ENST00000478563 ATMINO43313 823 aaPredicted RBP15.83■□□□□ 0.12
CDK13-204ENST00000478563 C7P10643 843 aa15.77■□□□□ 0.12
CDK13-204ENST00000478563 SLC39A7Q92504 469 aa15.77■□□□□ 0.12
CDK13-204ENST00000478563 FKBP8Q14318 412 aa15.76■□□□□ 0.11
CDK13-204ENST00000478563 LCE2DQ5TA82 110 aaPredicted RBP15.71■□□□□ 0.11
CDK13-204ENST00000478563 PCDH10Q9P2E7 1040 aa15.68■□□□□ 0.1
CDK13-204ENST00000478563 TSPYL2Q9H2G4 693 aaPredicted RBP15.67■□□□□ 0.1
CDK13-204ENST00000478563 ATN1P54259 1190 aaPredicted RBP15.66■□□□□ 0.1
CDK13-204ENST00000478563 MAMSTRQ6ZN01 415 aa15.66■□□□□ 0.1
CDK13-204ENST00000478563 FAM163AQ96GL9 167 aaPredicted RBP15.62■□□□□ 0.09
CDK13-204ENST00000478563 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
CDK13-204ENST00000478563 POTEFA5A3E0 1075 aa15.59■□□□□ 0.09
CDK13-204ENST00000478563 KIF12Q96FN5 646 aa15.58■□□□□ 0.08
CDK13-204ENST00000478563 SCUBE2Q9NQ36 999 aa15.56■□□□□ 0.08
CDK13-204ENST00000478563 TRPC6Q9Y210 931 aa15.56■□□□□ 0.08
CDK13-204ENST00000478563 BMP2KQ9NSY1 1161 aaPredicted RBP15.55■□□□□ 0.08
CDK13-204ENST00000478563 MAP3K13O43283 966 aa15.46■□□□□ 0.07
CDK13-204ENST00000478563 COLQQ9Y215 455 aaPredicted RBP15.42■□□□□ 0.06
CDK13-204ENST00000478563 TIE1P35590 1138 aa15.4■□□□□ 0.06
CDK13-204ENST00000478563 MIER1Q8N108 512 aa15.4■□□□□ 0.06
CDK13-204ENST00000478563 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
CDK13-204ENST00000478563 TTLL13PA6NNM8 815 aa15.36■□□□□ 0.05
CDK13-204ENST00000478563 SEC24BO95487 1268 aa15.31■□□□□ 0.04
CDK13-204ENST00000478563 PLCD3Q8N3E9 789 aa15.3■□□□□ 0.04
CDK13-204ENST00000478563 CDAN1Q8IWY9 1227 aa15.29■□□□□ 0.04
CDK13-204ENST00000478563 FBXO3Q9UK99 471 aa15.29■□□□□ 0.04
CDK13-204ENST00000478563 PLEKHG5O94827 1062 aa15.27■□□□□ 0.04
CDK13-204ENST00000478563 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
CDK13-204ENST00000478563 IER5LQ5T953 404 aa15.21■□□□□ 0.03
CDK13-204ENST00000478563 NUBP1P53384 320 aa15.18■□□□□ 0.02
CDK13-204ENST00000478563 PCDHB13Q9Y5F0 798 aa15.18■□□□□ 0.02
CDK13-204ENST00000478563 ST18O60284 1047 aa15.16■□□□□ 0.02
CDK13-204ENST00000478563 VASPP50552 380 aaPredicted RBP15.16■□□□□ 0.02
CDK13-204ENST00000478563 SLAIN1Q8ND83 568 aa15.16■□□□□ 0.02
CDK13-204ENST00000478563 SGIP1Q9BQI5 828 aa15.16■□□□□ 0.02
CDK13-204ENST00000478563 ZBTB47Q9UFB7 747 aaPredicted RBP15.15■□□□□ 0.02
CDK13-204ENST00000478563 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
CDK13-204ENST00000478563 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
CDK13-204ENST00000478563 IFNL1Q8IU54 200 aa15.11■□□□□ 0.01
CDK13-204ENST00000478563 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
CDK13-204ENST00000478563 TMEM106CQ9BVX2 250 aa15.06■□□□□ 0
CDK13-204ENST00000478563 PLCG2P16885 1265 aa15.02■□□□□ -0
CDK13-204ENST00000478563 IRX5P78411 483 aaPredicted RBP15.01□□□□□ -0.01
CDK13-204ENST00000478563 IFNLR1Q8IU57 520 aaPredicted RBP14.97□□□□□ -0.01
CDK13-204ENST00000478563 MMRN1Q13201 1228 aa14.96□□□□□ -0.01
CDK13-204ENST00000478563 SPNS2Q8IVW8 549 aa14.95□□□□□ -0.02
CDK13-204ENST00000478563 FAM212AQ96EL1 285 aa14.95□□□□□ -0.02
CDK13-204ENST00000478563 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
CDK13-204ENST00000478563 OCEL1Q9H607 264 aa14.89□□□□□ -0.03
CDK13-204ENST00000478563 MARVELD3Q96A59 401 aa14.88□□□□□ -0.03
CDK13-204ENST00000478563 TMEM121BQ9BXQ6 578 aaPredicted RBP14.88□□□□□ -0.03
CDK13-204ENST00000478563 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
CDK13-204ENST00000478563 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.82□□□□□ -0.04
CDK13-204ENST00000478563 SNPHO15079 494 aa14.81□□□□□ -0.04
CDK13-204ENST00000478563 PYGBP11216 843 aa14.8□□□□□ -0.04
CDK13-204ENST00000478563 SPOCK2Q92563 424 aa14.8□□□□□ -0.04
CDK13-204ENST00000478563 PCDHB8Q9UN66 801 aa14.79□□□□□ -0.04
CDK13-204ENST00000478563 GSE1Q14687 1217 aa14.77□□□□□ -0.05
CDK13-204ENST00000478563 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.05
CDK13-204ENST00000478563 CHRM1P11229 460 aaPredicted RBP14.69□□□□□ -0.06
CDK13-204ENST00000478563 POTEB3A0JP26 581 aa14.68□□□□□ -0.06
CDK13-204ENST00000478563 POTEBQ6S5H4 581 aa14.68□□□□□ -0.06
CDK13-204ENST00000478563 EMP3P54852 163 aa14.65□□□□□ -0.06
CDK13-204ENST00000478563 KRTAP3-3Q9BYR6 98 aa14.64□□□□□ -0.07
CDK13-204ENST00000478563 KRTAP3-2Q9BYR7 98 aa14.64□□□□□ -0.07
CDK13-204ENST00000478563 C3orf67Q6ZVT6 689 aa14.62□□□□□ -0.07
CDK13-204ENST00000478563 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
CDK13-204ENST00000478563 HS3ST6Q96QI5 342 aa14.6□□□□□ -0.07
CDK13-204ENST00000478563 FAM205CA6NFA0 338 aa14.58□□□□□ -0.08
CDK13-204ENST00000478563 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
CDK13-204ENST00000478563 ZNF467Q7Z7K2 595 aaPredicted RBP14.56□□□□□ -0.08
CDK13-204ENST00000478563 MKRN3Q13064 507 aaKnown RBP14.55□□□□□ -0.08
CDK13-204ENST00000478563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.52□□□□□ -0.094e-6■■■□□ 17.1
CDK13-204ENST00000478563 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
CDK13-204ENST00000478563 DPY19L2Q6NUT2 758 aa14.46□□□□□ -0.09
CDK13-204ENST00000478563 TRIM41Q8WV44 630 aa14.46□□□□□ -0.09
CDK13-204ENST00000478563 PSEN1P49768 467 aa14.45□□□□□ -0.1
CDK13-204ENST00000478563 ILDR1Q86SU0 546 aaPredicted RBP14.44□□□□□ -0.1
CDK13-204ENST00000478563 HOXB3P14651 431 aaPredicted RBP14.41□□□□□ -0.1
CDK13-204ENST00000478563 PDAP1Q13442 181 aaKnown RBP14.41□□□□□ -0.1
CDK13-204ENST00000478563 RNF25Q96BH1 459 aaPredicted RBP14.4□□□□□ -0.1
CDK13-204ENST00000478563 BOLA1Q9Y3E2 137 aa14.32□□□□□ -0.12
CDK13-204ENST00000478563 HOXB1P14653 301 aaPredicted RBP14.31□□□□□ -0.12
CDK13-204ENST00000478563 PKD2Q13563 968 aa14.29□□□□□ -0.12
CDK13-204ENST00000478563 RIOK3O14730 519 aaKnown RBP14.28□□□□□ -0.12
CDK13-204ENST00000478563 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
CDK13-204ENST00000478563 ZNF710Q8N1W2 664 aa14.26□□□□□ -0.13
CDK13-204ENST00000478563 ERBB3P21860 1342 aa14.25□□□□□ -0.13
CDK13-204ENST00000478563 G3V3G9 751 aa14.23□□□□□ -0.13
CDK13-204ENST00000478563 RNF166Q96A37 237 aaPredicted RBP14.22□□□□□ -0.13
CDK13-204ENST00000478563 VGFO15240 615 aaPredicted RBP14.21□□□□□ -0.13
CDK13-204ENST00000478563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.2□□□□□ -0.14
CDK13-204ENST00000478563 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
CDK13-204ENST00000478563 ZFP91Q96JP5 570 aaPredicted RBP14.2□□□□□ -0.14
CDK13-204ENST00000478563 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
CDK13-204ENST00000478563 VARS2Q5ST30 1063 aaKnown RBP14.17□□□□□ -0.14
CDK13-204ENST00000478563 EFCAB3Q8N7B9 438 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms