RNA–Protein interactions for RNA: ENST00000476923.1

PEX1-206, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 3

Gene PEX1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-206ENST00000476923 C7P10643 843 aa10.77□□□□□ -0.69
PEX1-206ENST00000476923 SLC39A7Q92504 469 aa10.77□□□□□ -0.69
PEX1-206ENST00000476923 MS4A3Q96HJ5 214 aa10.74□□□□□ -0.69
PEX1-206ENST00000476923 CDAN1Q8IWY9 1227 aa10.72□□□□□ -0.69
PEX1-206ENST00000476923 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
PEX1-206ENST00000476923 POTEFA5A3E0 1075 aa10.65□□□□□ -0.7
PEX1-206ENST00000476923 ATN1P54259 1190 aaPredicted RBP10.64□□□□□ -0.71
PEX1-206ENST00000476923 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
PEX1-206ENST00000476923 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
PEX1-206ENST00000476923 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
PEX1-206ENST00000476923 MMRN1Q13201 1228 aa10.54□□□□□ -0.72
PEX1-206ENST00000476923 BMP2KQ9NSY1 1161 aaPredicted RBP10.51□□□□□ -0.73
PEX1-206ENST00000476923 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
PEX1-206ENST00000476923 ST18O60284 1047 aa10.48□□□□□ -0.73
PEX1-206ENST00000476923 SPNS2Q8IVW8 549 aa10.48□□□□□ -0.73
PEX1-206ENST00000476923 COLQQ9Y215 455 aaPredicted RBP10.48□□□□□ -0.73
PEX1-206ENST00000476923 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
PEX1-206ENST00000476923 CCDC61Q9Y6R9 512 aa10.45□□□□□ -0.74
PEX1-206ENST00000476923 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
PEX1-206ENST00000476923 SEC24BO95487 1268 aa10.38□□□□□ -0.75
PEX1-206ENST00000476923 TIE1P35590 1138 aa10.37□□□□□ -0.75
PEX1-206ENST00000476923 SLAIN1Q8ND83 568 aa10.37□□□□□ -0.75
PEX1-206ENST00000476923 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
PEX1-206ENST00000476923 MAP3K13O43283 966 aa10.34□□□□□ -0.75
PEX1-206ENST00000476923 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
PEX1-206ENST00000476923 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
PEX1-206ENST00000476923 IER5LQ5T953 404 aa10.25□□□□□ -0.77
PEX1-206ENST00000476923 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
PEX1-206ENST00000476923 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
PEX1-206ENST00000476923 RASEFQ8IZ41 740 aa10.16□□□□□ -0.78
PEX1-206ENST00000476923 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
PEX1-206ENST00000476923 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
PEX1-206ENST00000476923 PLCG2P16885 1265 aa10.11□□□□□ -0.79
PEX1-206ENST00000476923 POTEB3A0JP26 581 aa10.1□□□□□ -0.79
PEX1-206ENST00000476923 IRX5P78411 483 aaPredicted RBP10.1□□□□□ -0.79
PEX1-206ENST00000476923 POTEBQ6S5H4 581 aa10.1□□□□□ -0.79
PEX1-206ENST00000476923 PCDHB13Q9Y5F0 798 aa10.1□□□□□ -0.79
PEX1-206ENST00000476923 SNPHO15079 494 aa10.09□□□□□ -0.79
PEX1-206ENST00000476923 SGIP1Q9BQI5 828 aa10.06□□□□□ -0.8
PEX1-206ENST00000476923 EMP3P54852 163 aa10.05□□□□□ -0.8
PEX1-206ENST00000476923 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
PEX1-206ENST00000476923 TMEM106CQ9BVX2 250 aa10.05□□□□□ -0.8
PEX1-206ENST00000476923 HS3ST6Q96QI5 342 aa10.04□□□□□ -0.8
PEX1-206ENST00000476923 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
PEX1-206ENST00000476923 FAM205CA6NFA0 338 aa10□□□□□ -0.81
PEX1-206ENST00000476923 OCEL1Q9H607 264 aa9.98□□□□□ -0.81
PEX1-206ENST00000476923 PROM2Q8N271 834 aa9.97□□□□□ -0.81
PEX1-206ENST00000476923 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
PEX1-206ENST00000476923 MIER1Q8N108 512 aa9.94□□□□□ -0.82
PEX1-206ENST00000476923 PLEKHG5O94827 1062 aa9.91□□□□□ -0.82
PEX1-206ENST00000476923 NUBP1P53384 320 aa9.87□□□□□ -0.83
PEX1-206ENST00000476923 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
PEX1-206ENST00000476923 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
PEX1-206ENST00000476923 PDCD7Q8N8D1 485 aaKnown RBP9.83□□□□□ -0.84
PEX1-206ENST00000476923 PLCD3Q8N3E9 789 aa9.75□□□□□ -0.85
PEX1-206ENST00000476923 FAM212AQ96EL1 285 aa9.75□□□□□ -0.85
PEX1-206ENST00000476923 MYT1LQ9UL68 1186 aa9.75□□□□□ -0.85
PEX1-206ENST00000476923 PCDHB8Q9UN66 801 aa9.74□□□□□ -0.85
PEX1-206ENST00000476923 HOXB3P14651 431 aaPredicted RBP9.73□□□□□ -0.85
PEX1-206ENST00000476923 L3MBTL3Q96JM7 780 aaPredicted RBP9.73□□□□□ -0.85
PEX1-206ENST00000476923 PYGBP11216 843 aa9.71□□□□□ -0.86
PEX1-206ENST00000476923 HOXB1P14653 301 aaPredicted RBP9.69□□□□□ -0.86
PEX1-206ENST00000476923 ERBB3P21860 1342 aa9.69□□□□□ -0.86
PEX1-206ENST00000476923 ZBTB47Q9UFB7 747 aaPredicted RBP9.66□□□□□ -0.86
PEX1-206ENST00000476923 MKRN3Q13064 507 aaKnown RBP9.64□□□□□ -0.87
PEX1-206ENST00000476923 VARS2Q5ST30 1063 aaKnown RBP9.63□□□□□ -0.87
PEX1-206ENST00000476923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.63□□□□□ -0.875e-7■■■■■ 27
PEX1-206ENST00000476923 ZNF710Q8N1W2 664 aa9.62□□□□□ -0.87
PEX1-206ENST00000476923 DPY19L2Q6NUT2 758 aa9.61□□□□□ -0.87
PEX1-206ENST00000476923 GOLGA2Q08379 1002 aa9.6□□□□□ -0.87
PEX1-206ENST00000476923 DCAF8Q5TAQ9 597 aa9.6□□□□□ -0.87
PEX1-206ENST00000476923 ILDR1Q86SU0 546 aaPredicted RBP9.56□□□□□ -0.88
PEX1-206ENST00000476923 ZNF687Q8N1G0 1237 aa9.56□□□□□ -0.88
PEX1-206ENST00000476923 DOK7Q18PE1 504 aa9.55□□□□□ -0.88
PEX1-206ENST00000476923 PTGER2P43116 358 aa9.52□□□□□ -0.89
PEX1-206ENST00000476923 BOLA1Q9Y3E2 137 aa9.51□□□□□ -0.89
PEX1-206ENST00000476923 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
PEX1-206ENST00000476923 ZNF467Q7Z7K2 595 aaPredicted RBP9.48□□□□□ -0.89
PEX1-206ENST00000476923 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
PEX1-206ENST00000476923 PSEN1P49768 467 aa9.47□□□□□ -0.89
PEX1-206ENST00000476923 G3V3G9 751 aa9.45□□□□□ -0.9
PEX1-206ENST00000476923 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
PEX1-206ENST00000476923 GPR153Q6NV75 609 aa9.42□□□□□ -0.9
PEX1-206ENST00000476923 EHMT2Q96KQ7 1210 aa9.39□□□□□ -0.91
PEX1-206ENST00000476923 ZSWIM6Q9HCJ5 1215 aa9.39□□□□□ -0.91
PEX1-206ENST00000476923 LSM11P83369 360 aaKnown RBP eCLIP9.37□□□□□ -0.91
PEX1-206ENST00000476923 TMEM92Q6UXU6 159 aa9.37□□□□□ -0.91
PEX1-206ENST00000476923 CABP2Q9NPB3 220 aa9.37□□□□□ -0.91
PEX1-206ENST00000476923 CHRM1P11229 460 aaPredicted RBP9.32□□□□□ -0.92
PEX1-206ENST00000476923 ARSIQ5FYB1 569 aa9.32□□□□□ -0.92
PEX1-206ENST00000476923 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
PEX1-206ENST00000476923 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
PEX1-206ENST00000476923 GSE1Q14687 1217 aa9.3□□□□□ -0.92
PEX1-206ENST00000476923 KHSRPQ92945 711 aaKnown RBP eCLIP9.3□□□□□ -0.92
PEX1-206ENST00000476923 ZNF316A6NFI3 1004 aaPredicted RBP9.29□□□□□ -0.92
PEX1-206ENST00000476923 POTEEQ6S8J3 1075 aa9.27□□□□□ -0.93
PEX1-206ENST00000476923 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
PEX1-206ENST00000476923 AXIN2Q9Y2T1 843 aa9.23□□□□□ -0.93
PEX1-206ENST00000476923 PBX2P40425 430 aa9.18□□□□□ -0.94
PEX1-206ENST00000476923 EFCAB3Q8N7B9 438 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms