RNA–Protein interactions for RNA: ENST00000474082.1

FAM3C-204, Transcript of family with sequence similarity 3 member C, humanhuman

TSL 2

Gene FAM3C, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-204ENST00000474082 CHGAP10645 457 aaKnown RBP15.09■□□□□ 0.01
FAM3C-204ENST00000474082 CHADLQ6NUI6 762 aa15.07■□□□□ 0
FAM3C-204ENST00000474082 PAXIP1Q6ZW49 1069 aaPredicted RBP15.04■□□□□ -0
FAM3C-204ENST00000474082 HS6ST3Q8IZP7 471 aa15.02■□□□□ -0
FAM3C-204ENST00000474082 RIOK3O14730 519 aaKnown RBP15.01□□□□□ -0.01
FAM3C-204ENST00000474082 CHRM1P11229 460 aaPredicted RBP15.01□□□□□ -0.01
FAM3C-204ENST00000474082 CFAP44Q96MT7 982 aa15□□□□□ -0.01
FAM3C-204ENST00000474082 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
FAM3C-204ENST00000474082 SPRYD3Q8NCJ5 442 aa14.95□□□□□ -0.02
FAM3C-204ENST00000474082 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.02
FAM3C-204ENST00000474082 PYGBP11216 843 aa14.93□□□□□ -0.02
FAM3C-204ENST00000474082 PRKAR2AP13861 404 aaKnown RBP14.93□□□□□ -0.02
FAM3C-204ENST00000474082 VSIG10Q8N0Z9 540 aa14.92□□□□□ -0.02
FAM3C-204ENST00000474082 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
FAM3C-204ENST00000474082 TAOK2Q9UL54 1235 aa14.92□□□□□ -0.02
FAM3C-204ENST00000474082 VGFO15240 615 aaPredicted RBP14.9□□□□□ -0.02
FAM3C-204ENST00000474082 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
FAM3C-204ENST00000474082 CHRDL2Q6WN34 429 aa14.85□□□□□ -0.03
FAM3C-204ENST00000474082 STK25O00506 426 aa14.84□□□□□ -0.03
FAM3C-204ENST00000474082 SGIP1Q9BQI5 828 aa14.84□□□□□ -0.03
FAM3C-204ENST00000474082 NKX1-1Q15270 411 aaPredicted RBP14.83□□□□□ -0.04
FAM3C-204ENST00000474082 KDM2AQ9Y2K7 1162 aa14.83□□□□□ -0.04
FAM3C-204ENST00000474082 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
FAM3C-204ENST00000474082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.8□□□□□ -0.04
FAM3C-204ENST00000474082 PIP4P2Q8N4L2 257 aa14.8□□□□□ -0.04
FAM3C-204ENST00000474082 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
FAM3C-204ENST00000474082 CCDC61Q9Y6R9 512 aa14.77□□□□□ -0.05
FAM3C-204ENST00000474082 BCL11BQ9C0K0 894 aaPredicted RBP14.76□□□□□ -0.05
FAM3C-204ENST00000474082 STK24Q9Y6E0 443 aa14.75□□□□□ -0.05
FAM3C-204ENST00000474082 GTPBP6O43824 516 aaPredicted RBP14.72□□□□□ -0.05
FAM3C-204ENST00000474082 ZNF467Q7Z7K2 595 aaPredicted RBP14.72□□□□□ -0.05
FAM3C-204ENST00000474082 PCDHB8Q9UN66 801 aa14.67□□□□□ -0.06
FAM3C-204ENST00000474082 PCDHB13Q9Y5F0 798 aa14.67□□□□□ -0.06
FAM3C-204ENST00000474082 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
FAM3C-204ENST00000474082 PDAP1Q13442 181 aaKnown RBP14.64□□□□□ -0.07
FAM3C-204ENST00000474082 BCANQ96GW7 911 aa14.63□□□□□ -0.07
FAM3C-204ENST00000474082 ZNF579Q8NAF0 562 aaKnown RBP14.62□□□□□ -0.07
FAM3C-204ENST00000474082 POTEHQ6S545 545 aa14.59□□□□□ -0.07
FAM3C-204ENST00000474082 KIF12Q96FN5 646 aa14.58□□□□□ -0.08
FAM3C-204ENST00000474082 MAP3K13O43283 966 aa14.56□□□□□ -0.08
FAM3C-204ENST00000474082 PSEN1P49768 467 aa14.56□□□□□ -0.08
FAM3C-204ENST00000474082 IFNL1Q8IU54 200 aa14.56□□□□□ -0.08
FAM3C-204ENST00000474082 RYDENQ9NUL5 291 aaKnown RBP14.56□□□□□ -0.08
FAM3C-204ENST00000474082 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
FAM3C-204ENST00000474082 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
FAM3C-204ENST00000474082 PHF12Q96QT6 1004 aa14.47□□□□□ -0.09
FAM3C-204ENST00000474082 MFRPQ9BY79 579 aa14.43□□□□□ -0.1
FAM3C-204ENST00000474082 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
FAM3C-204ENST00000474082 CABP2Q9NPB3 220 aa14.39□□□□□ -0.11
FAM3C-204ENST00000474082 EFCAB3Q8N7B9 438 aa14.38□□□□□ -0.11
FAM3C-204ENST00000474082 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
FAM3C-204ENST00000474082 SOX12O15370 315 aa14.32□□□□□ -0.12
FAM3C-204ENST00000474082 CADPS2Q86UW7 1296 aa14.32□□□□□ -0.12
FAM3C-204ENST00000474082 MS4A3Q96HJ5 214 aa14.31□□□□□ -0.12
FAM3C-204ENST00000474082 NLRP6P59044 892 aa14.3□□□□□ -0.12
FAM3C-204ENST00000474082 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
FAM3C-204ENST00000474082 TRPC6Q9Y210 931 aa14.3□□□□□ -0.12
FAM3C-204ENST00000474082 PPP1R37O75864 691 aa14.29□□□□□ -0.12
FAM3C-204ENST00000474082 PRKCSHP14314 528 aaPredicted RBP14.26□□□□□ -0.13
FAM3C-204ENST00000474082 NBR1Q14596 966 aa14.26□□□□□ -0.13
FAM3C-204ENST00000474082 TMEM106CQ9BVX2 250 aa14.26□□□□□ -0.13
FAM3C-204ENST00000474082 MS4A4AQ96JQ5 239 aa14.2□□□□□ -0.14
FAM3C-204ENST00000474082 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
FAM3C-204ENST00000474082 TIE1P35590 1138 aa14.17□□□□□ -0.14
FAM3C-204ENST00000474082 TPRNQ4KMQ1 711 aa14.17□□□□□ -0.14
FAM3C-204ENST00000474082 WDR70Q9NW82 654 aa14.15□□□□□ -0.14
FAM3C-204ENST00000474082 TTLL13PA6NNM8 815 aa14.14□□□□□ -0.15
FAM3C-204ENST00000474082 HAX1O00165 279 aa14.13□□□□□ -0.15
FAM3C-204ENST00000474082 GALR2O43603 387 aaPredicted RBP14.13□□□□□ -0.15
FAM3C-204ENST00000474082 EVX2Q03828 476 aa14.13□□□□□ -0.15
FAM3C-204ENST00000474082 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
FAM3C-204ENST00000474082 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
FAM3C-204ENST00000474082 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
FAM3C-204ENST00000474082 KCNV2Q8TDN2 545 aa14.1□□□□□ -0.15
FAM3C-204ENST00000474082 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
FAM3C-204ENST00000474082 CLCN6P51797 869 aa14.04□□□□□ -0.16
FAM3C-204ENST00000474082 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
FAM3C-204ENST00000474082 NCKAP5LQ9HCH0 1330 aa14.04□□□□□ -0.16
FAM3C-204ENST00000474082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.02□□□□□ -0.17
FAM3C-204ENST00000474082 CRISPLD2Q9H0B8 497 aa13.98□□□□□ -0.17
FAM3C-204ENST00000474082 PDE4AP27815 886 aa13.97□□□□□ -0.17
FAM3C-204ENST00000474082 E2F4Q16254 413 aa13.97□□□□□ -0.17
FAM3C-204ENST00000474082 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
FAM3C-204ENST00000474082 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
FAM3C-204ENST00000474082 MFSD10Q14728 455 aa13.95□□□□□ -0.18
FAM3C-204ENST00000474082 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
FAM3C-204ENST00000474082 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
FAM3C-204ENST00000474082 ASTLQ6HA08 431 aaPredicted RBP13.92□□□□□ -0.18
FAM3C-204ENST00000474082 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
FAM3C-204ENST00000474082 PDCD7Q8N8D1 485 aaKnown RBP13.9□□□□□ -0.18
FAM3C-204ENST00000474082 DDX27Q96GQ7 796 aaKnown RBP13.9□□□□□ -0.18
FAM3C-204ENST00000474082 IRX5P78411 483 aaPredicted RBP13.87□□□□□ -0.19
FAM3C-204ENST00000474082 GABBR2O75899 941 aa13.85□□□□□ -0.19
FAM3C-204ENST00000474082 IER5LQ5T953 404 aa13.85□□□□□ -0.19
FAM3C-204ENST00000474082 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
FAM3C-204ENST00000474082 CAMK2BQ13554 666 aa13.83□□□□□ -0.2
FAM3C-204ENST00000474082 GPHNQ9NQX3 736 aaPredicted RBP13.83□□□□□ -0.2
FAM3C-204ENST00000474082 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
FAM3C-204ENST00000474082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.81□□□□□ -0.2
FAM3C-204ENST00000474082 ARIH1Q9Y4X5 557 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms