RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ARXQ96QS3 562 aa5.2□□□□□ -1.58
XRN1-210ENST00000472697 CIZ1Q9ULV3 898 aaPredicted RBP5.19□□□□□ -1.58
XRN1-210ENST00000472697 TRIM41Q8WV44 630 aa5.17□□□□□ -1.58
XRN1-210ENST00000472697 C14orf37Q86TY3 774 aa5.17□□□□□ -1.58
XRN1-210ENST00000472697 HAX1O00165 279 aa5.15□□□□□ -1.58
XRN1-210ENST00000472697 UBTFP17480 764 aaKnown RBP5.15□□□□□ -1.59
XRN1-210ENST00000472697 PLCD3Q8N3E9 789 aa5.15□□□□□ -1.59
XRN1-210ENST00000472697 GTPBP6O43824 516 aaPredicted RBP5.14□□□□□ -1.59
XRN1-210ENST00000472697 REM2Q8IYK8 340 aaPredicted RBP5.14□□□□□ -1.59
XRN1-210ENST00000472697 MIER1Q8N108 512 aa5.13□□□□□ -1.59
XRN1-210ENST00000472697 BRPF1P55201 1214 aaPredicted RBP5.12□□□□□ -1.59
XRN1-210ENST00000472697 PODXL2Q9NZ53 605 aa5.11□□□□□ -1.59
XRN1-210ENST00000472697 HOMEZQ8IX15 550 aa5.11□□□□□ -1.59
XRN1-210ENST00000472697 OSCARQ8IYS5 282 aa5.1□□□□□ -1.59
XRN1-210ENST00000472697 CADPS2Q86UW7 1296 aa5.1□□□□□ -1.59
XRN1-210ENST00000472697 HS6ST3Q8IZP7 471 aa5.09□□□□□ -1.59
XRN1-210ENST00000472697 PIP4P2Q8N4L2 257 aa5.09□□□□□ -1.59
XRN1-210ENST00000472697 FXR2P51116 673 aaKnown RBP eCLIP5.08□□□□□ -1.6
XRN1-210ENST00000472697 CLCN6P51797 869 aa5.08□□□□□ -1.6
XRN1-210ENST00000472697 KCNV2Q8TDN2 545 aa5.08□□□□□ -1.6
XRN1-210ENST00000472697 PABPN1Q86U42 306 aaKnown RBP eCLIP5.07□□□□□ -1.6
XRN1-210ENST00000472697 TRIM26Q12899 539 aaPredicted RBP5.07□□□□□ -1.6
XRN1-210ENST00000472697 PITPNM1O00562 1244 aa5.06□□□□□ -1.6
XRN1-210ENST00000472697 ZNF692Q9BU19 519 aaPredicted RBP5.06□□□□□ -1.6
XRN1-210ENST00000472697 HRCP23327 699 aa5.05□□□□□ -1.6
XRN1-210ENST00000472697 SPDYE2BA6NHP3 402 aa5.05□□□□□ -1.6
XRN1-210ENST00000472697 SPDYE6P0CI01 402 aa5.05□□□□□ -1.6
XRN1-210ENST00000472697 SPDYE2Q495Y8 402 aa5.05□□□□□ -1.6
XRN1-210ENST00000472697 LMOD2Q6P5Q4 547 aa5.04□□□□□ -1.6
XRN1-210ENST00000472697 STK25O00506 426 aa5.04□□□□□ -1.6
XRN1-210ENST00000472697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.04□□□□□ -1.6
XRN1-210ENST00000472697 SLC24A3Q9HC58 644 aa5.02□□□□□ -1.61
XRN1-210ENST00000472697 C1orf115Q9H7X2 142 aa5.01□□□□□ -1.61
XRN1-210ENST00000472697 ARID3AQ99856 593 aa5□□□□□ -1.61
XRN1-210ENST00000472697 NEUROD2Q15784 382 aa5□□□□□ -1.61
XRN1-210ENST00000472697 BCL11BQ9C0K0 894 aaPredicted RBP5□□□□□ -1.61
XRN1-210ENST00000472697 GPBP1L1Q9HC44 474 aaPredicted RBP5□□□□□ -1.61
XRN1-210ENST00000472697 SEMA3EO15041 775 aa4.99□□□□□ -1.61
XRN1-210ENST00000472697 SSUH2Q9Y2M2 353 aa4.99□□□□□ -1.61
XRN1-210ENST00000472697 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.98□□□□□ -1.61
XRN1-210ENST00000472697 POTEMA6NI47 508 aa4.98□□□□□ -1.61
XRN1-210ENST00000472697 ZFP91Q96JP5 570 aaPredicted RBP4.98□□□□□ -1.61
XRN1-210ENST00000472697 ARID3CA6NKF2 412 aa4.97□□□□□ -1.61
XRN1-210ENST00000472697 NUBP1P53384 320 aa4.97□□□□□ -1.61
XRN1-210ENST00000472697 ZC3H15Q8WU90 426 aaKnown RBP4.97□□□□□ -1.61
XRN1-210ENST00000472697 SPDYE1Q8NFV5 336 aaPredicted RBP4.97□□□□□ -1.61
XRN1-210ENST00000472697 STK24Q9Y6E0 443 aa4.97□□□□□ -1.61
XRN1-210ENST00000472697 RIOK3O14730 519 aaKnown RBP4.95□□□□□ -1.62
XRN1-210ENST00000472697 PYGBP11216 843 aa4.95□□□□□ -1.62
XRN1-210ENST00000472697 POTEGQ6S5H5 508 aa4.94□□□□□ -1.62
XRN1-210ENST00000472697 EVX2Q03828 476 aa4.93□□□□□ -1.62
XRN1-210ENST00000472697 RASEFQ8IZ41 740 aa4.93□□□□□ -1.62
XRN1-210ENST00000472697 STAG3Q9UJ98 1225 aa4.93□□□□□ -1.62
XRN1-210ENST00000472697 GABBR2O75899 941 aa4.93□□□□□ -1.62
XRN1-210ENST00000472697 DCAF8Q5TAQ9 597 aa4.93□□□□□ -1.62
XRN1-210ENST00000472697 C19orf67A6NJJ6 358 aa4.92□□□□□ -1.62
XRN1-210ENST00000472697 PRKAR2AP13861 404 aaKnown RBP4.92□□□□□ -1.62
XRN1-210ENST00000472697 PPP1R37O75864 691 aa4.92□□□□□ -1.62
XRN1-210ENST00000472697 IL27Q8NEV9 243 aa4.92□□□□□ -1.62
XRN1-210ENST00000472697 MNX1P50219 401 aaPredicted RBP4.9□□□□□ -1.62
XRN1-210ENST00000472697 CLEC11AQ9Y240 323 aa4.89□□□□□ -1.63
XRN1-210ENST00000472697 NECTIN2Q92692 538 aa4.88□□□□□ -1.63
XRN1-210ENST00000472697 MKRN3Q13064 507 aaKnown RBP4.88□□□□□ -1.63
XRN1-210ENST00000472697 NPM2Q86SE8 214 aaKnown RBP4.87□□□□□ -1.63
XRN1-210ENST00000472697 MFRPQ9BY79 579 aa4.86□□□□□ -1.63
XRN1-210ENST00000472697 RBM26Q5T8P6 1007 aaKnown RBP4.85□□□□□ -1.63
XRN1-210ENST00000472697 VGFO15240 615 aaPredicted RBP4.85□□□□□ -1.63
XRN1-210ENST00000472697 ZMYND10O75800 440 aa4.84□□□□□ -1.63
XRN1-210ENST00000472697 PRR29P0C7W0 189 aa4.84□□□□□ -1.63
XRN1-210ENST00000472697 P3H3Q8IVL6 736 aa4.84□□□□□ -1.63
XRN1-210ENST00000472697 PCDHB8Q9UN66 801 aa4.84□□□□□ -1.63
XRN1-210ENST00000472697 PCDHB13Q9Y5F0 798 aa4.84□□□□□ -1.63
XRN1-210ENST00000472697 MLLT3P42568 568 aaPredicted RBP4.83□□□□□ -1.64
XRN1-210ENST00000472697 TESPA1A2RU30 521 aaPredicted RBP4.83□□□□□ -1.64
XRN1-210ENST00000472697 CREBZFQ9NS37 354 aa4.82□□□□□ -1.64
XRN1-210ENST00000472697 NCKAP5LQ9HCH0 1330 aa4.82□□□□□ -1.64
XRN1-210ENST00000472697 CHADLQ6NUI6 762 aa4.82□□□□□ -1.64
XRN1-210ENST00000472697 GSE1Q14687 1217 aa4.81□□□□□ -1.64
XRN1-210ENST00000472697 ERICH6Q7L0X2 663 aa4.81□□□□□ -1.64
XRN1-210ENST00000472697 FAM117AQ9C073 453 aa4.81□□□□□ -1.64
XRN1-210ENST00000472697 ZMYND15Q9H091 742 aa4.81□□□□□ -1.64
XRN1-210ENST00000472697 WDR70Q9NW82 654 aa4.81□□□□□ -1.64
XRN1-210ENST00000472697 APBB1O00213 710 aa4.81□□□□□ -1.64
XRN1-210ENST00000472697 ZNF428Q96B54 188 aa4.8□□□□□ -1.64
XRN1-210ENST00000472697 KDM4CQ9H3R0 1056 aa4.8□□□□□ -1.64
XRN1-210ENST00000472697 RANGAP1P46060 587 aaPredicted RBP4.79□□□□□ -1.64
XRN1-210ENST00000472697 CLUAP1Q96AJ1 413 aa4.79□□□□□ -1.64
XRN1-210ENST00000472697 ZBTB47Q9UFB7 747 aaPredicted RBP4.79□□□□□ -1.64
XRN1-210ENST00000472697 FARP1Q9Y4F1 1045 aaPredicted RBP4.79□□□□□ -1.64
XRN1-210ENST00000472697 FAM212AQ96EL1 285 aa4.79□□□□□ -1.64
XRN1-210ENST00000472697 E2F4Q16254 413 aa4.78□□□□□ -1.64
XRN1-210ENST00000472697 LOC105371045A0A1W2PR82 267 aa4.78□□□□□ -1.64
XRN1-210ENST00000472697 PLEKHG5O94827 1062 aa4.78□□□□□ -1.64
XRN1-210ENST00000472697 PLEKHG3A1L390 1219 aa4.77□□□□□ -1.65
XRN1-210ENST00000472697 ARHGEF1Q92888 912 aaKnown RBP4.76□□□□□ -1.65
XRN1-210ENST00000472697 TSPYL2Q9H2G4 693 aaPredicted RBP4.76□□□□□ -1.65
XRN1-210ENST00000472697 CD44P16070 742 aaKnown RBP4.76□□□□□ -1.65
XRN1-210ENST00000472697 BARGINQ6ZT62 677 aa4.76□□□□□ -1.65
XRN1-210ENST00000472697 RSPH6AQ9H0K4 717 aa4.76□□□□□ -1.65
XRN1-210ENST00000472697 PHF8Q9UPP1 1060 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms