RNA–Protein interactions for RNA: ENST00000472357.1

TM2D1-206, Transcript of TM2 domain containing 1, humanhuman

TSL 2

Gene TM2D1, Length 744 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-206ENST00000472357 NPM1P06748 294 aaKnown RBP eCLIP14.67□□□□□ -0.06
TM2D1-206ENST00000472357 METRNQ9UJH8 293 aa14.67□□□□□ -0.06
TM2D1-206ENST00000472357 ATMINO43313 823 aaPredicted RBP14.66□□□□□ -0.06
TM2D1-206ENST00000472357 LCE2DQ5TA82 110 aaPredicted RBP14.61□□□□□ -0.07
TM2D1-206ENST00000472357 C7P10643 843 aa14.59□□□□□ -0.07
TM2D1-206ENST00000472357 SLC39A7Q92504 469 aa14.58□□□□□ -0.08
TM2D1-206ENST00000472357 PCDH10Q9P2E7 1040 aa14.51□□□□□ -0.09
TM2D1-206ENST00000472357 ATN1P54259 1190 aaPredicted RBP14.5□□□□□ -0.09
TM2D1-206ENST00000472357 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
TM2D1-206ENST00000472357 POTEFA5A3E0 1075 aa14.47□□□□□ -0.09
TM2D1-206ENST00000472357 MAMSTRQ6ZN01 415 aa14.47□□□□□ -0.09
TM2D1-206ENST00000472357 TSPYL2Q9H2G4 693 aaPredicted RBP14.45□□□□□ -0.1
TM2D1-206ENST00000472357 PROM2Q8N271 834 aa14.43□□□□□ -0.1
TM2D1-206ENST00000472357 KIF12Q96FN5 646 aa14.42□□□□□ -0.1
TM2D1-206ENST00000472357 TRPC6Q9Y210 931 aa14.42□□□□□ -0.1
TM2D1-206ENST00000472357 BMP2KQ9NSY1 1161 aaPredicted RBP14.41□□□□□ -0.1
TM2D1-206ENST00000472357 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
TM2D1-206ENST00000472357 SCUBE2Q9NQ36 999 aa14.36□□□□□ -0.11
TM2D1-206ENST00000472357 MAP3K13O43283 966 aa14.3□□□□□ -0.12
TM2D1-206ENST00000472357 COLQQ9Y215 455 aaPredicted RBP14.28□□□□□ -0.12
TM2D1-206ENST00000472357 TIE1P35590 1138 aa14.27□□□□□ -0.13
TM2D1-206ENST00000472357 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
TM2D1-206ENST00000472357 TTLL13PA6NNM8 815 aa14.22□□□□□ -0.13
TM2D1-206ENST00000472357 CDAN1Q8IWY9 1227 aa14.12□□□□□ -0.15
TM2D1-206ENST00000472357 SEC24BO95487 1268 aa14.11□□□□□ -0.15
TM2D1-206ENST00000472357 TRIM35Q9UPQ4 493 aa14.1□□□□□ -0.15
TM2D1-206ENST00000472357 IER5LQ5T953 404 aa14.09□□□□□ -0.15
TM2D1-206ENST00000472357 MIER1Q8N108 512 aa14.09□□□□□ -0.15
TM2D1-206ENST00000472357 SGIP1Q9BQI5 828 aa14.05□□□□□ -0.16
TM2D1-206ENST00000472357 ST18O60284 1047 aa14.03□□□□□ -0.16
TM2D1-206ENST00000472357 PCDHB13Q9Y5F0 798 aa14.03□□□□□ -0.16
TM2D1-206ENST00000472357 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
TM2D1-206ENST00000472357 IFNL1Q8IU54 200 aa14□□□□□ -0.17
TM2D1-206ENST00000472357 NUBP1P53384 320 aa13.99□□□□□ -0.17
TM2D1-206ENST00000472357 SLAIN1Q8ND83 568 aa13.99□□□□□ -0.17
TM2D1-206ENST00000472357 IRX5P78411 483 aaPredicted RBP13.92□□□□□ -0.18
TM2D1-206ENST00000472357 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
TM2D1-206ENST00000472357 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
TM2D1-206ENST00000472357 PLCG2P16885 1265 aa13.87□□□□□ -0.19
TM2D1-206ENST00000472357 MMRN1Q13201 1228 aa13.83□□□□□ -0.2
TM2D1-206ENST00000472357 SPNS2Q8IVW8 549 aa13.83□□□□□ -0.2
TM2D1-206ENST00000472357 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
TM2D1-206ENST00000472357 TMEM121BQ9BXQ6 578 aaPredicted RBP13.79□□□□□ -0.2
TM2D1-206ENST00000472357 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
TM2D1-206ENST00000472357 OCEL1Q9H607 264 aa13.77□□□□□ -0.21
TM2D1-206ENST00000472357 MARVELD3Q96A59 401 aa13.73□□□□□ -0.21
TM2D1-206ENST00000472357 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
TM2D1-206ENST00000472357 PYGBP11216 843 aa13.67□□□□□ -0.22
TM2D1-206ENST00000472357 PCDHB8Q9UN66 801 aa13.67□□□□□ -0.22
TM2D1-206ENST00000472357 SNPHO15079 494 aa13.66□□□□□ -0.22
TM2D1-206ENST00000472357 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
TM2D1-206ENST00000472357 POTEB3A0JP26 581 aa13.61□□□□□ -0.23
TM2D1-206ENST00000472357 POTEBQ6S5H4 581 aa13.61□□□□□ -0.23
TM2D1-206ENST00000472357 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
TM2D1-206ENST00000472357 KRTAP3-3Q9BYR6 98 aa13.58□□□□□ -0.24
TM2D1-206ENST00000472357 KRTAP3-2Q9BYR7 98 aa13.58□□□□□ -0.24
TM2D1-206ENST00000472357 EMP3P54852 163 aa13.53□□□□□ -0.24
TM2D1-206ENST00000472357 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
TM2D1-206ENST00000472357 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
TM2D1-206ENST00000472357 FKBP8Q14318 412 aa13.46□□□□□ -0.25
TM2D1-206ENST00000472357 FAM205CA6NFA0 338 aa13.45□□□□□ -0.26
TM2D1-206ENST00000472357 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
TM2D1-206ENST00000472357 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
TM2D1-206ENST00000472357 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
TM2D1-206ENST00000472357 ZNF467Q7Z7K2 595 aaPredicted RBP13.42□□□□□ -0.26
TM2D1-206ENST00000472357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.26
TM2D1-206ENST00000472357 CHRM1P11229 460 aaPredicted RBP13.37□□□□□ -0.27
TM2D1-206ENST00000472357 HOXB3P14651 431 aaPredicted RBP13.37□□□□□ -0.27
TM2D1-206ENST00000472357 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
TM2D1-206ENST00000472357 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
TM2D1-206ENST00000472357 PSEN1P49768 467 aa13.35□□□□□ -0.27
TM2D1-206ENST00000472357 GSE1Q14687 1217 aa13.33□□□□□ -0.28
TM2D1-206ENST00000472357 FBXO3Q9UK99 471 aa13.27□□□□□ -0.29
TM2D1-206ENST00000472357 HOXB1P14653 301 aaPredicted RBP13.25□□□□□ -0.29
TM2D1-206ENST00000472357 BOLA1Q9Y3E2 137 aa13.24□□□□□ -0.29
TM2D1-206ENST00000472357 VASPP50552 380 aaPredicted RBP13.23□□□□□ -0.29
TM2D1-206ENST00000472357 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
TM2D1-206ENST00000472357 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
TM2D1-206ENST00000472357 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
TM2D1-206ENST00000472357 ERBB3P21860 1342 aa13.14□□□□□ -0.31
TM2D1-206ENST00000472357 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
TM2D1-206ENST00000472357 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
TM2D1-206ENST00000472357 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
TM2D1-206ENST00000472357 G3V3G9 751 aa13.09□□□□□ -0.31
TM2D1-206ENST00000472357 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
TM2D1-206ENST00000472357 TMEM92Q6UXU6 159 aa13.07□□□□□ -0.32
TM2D1-206ENST00000472357 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
TM2D1-206ENST00000472357 ZNF687Q8N1G0 1237 aa13.01□□□□□ -0.33
TM2D1-206ENST00000472357 GPR153Q6NV75 609 aa13□□□□□ -0.33
TM2D1-206ENST00000472357 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
TM2D1-206ENST00000472357 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
TM2D1-206ENST00000472357 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
TM2D1-206ENST00000472357 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
TM2D1-206ENST00000472357 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
TM2D1-206ENST00000472357 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
TM2D1-206ENST00000472357 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
TM2D1-206ENST00000472357 MS4A4AQ96JQ5 239 aa12.91□□□□□ -0.34
TM2D1-206ENST00000472357 PTGER2P43116 358 aa12.88□□□□□ -0.35
TM2D1-206ENST00000472357 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
TM2D1-206ENST00000472357 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.361e-7■■■□□ 16.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms