RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
NF1-208ENST00000471572 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
NF1-208ENST00000471572 TRIM26Q12899 539 aaPredicted RBP11.09□□□□□ -0.63
NF1-208ENST00000471572 P3H3Q8IVL6 736 aa11.09□□□□□ -0.63
NF1-208ENST00000471572 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
NF1-208ENST00000471572 NEUROD2Q15784 382 aa11.06□□□□□ -0.64
NF1-208ENST00000471572 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
NF1-208ENST00000471572 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
NF1-208ENST00000471572 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
NF1-208ENST00000471572 STK25O00506 426 aa11.04□□□□□ -0.64
NF1-208ENST00000471572 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
NF1-208ENST00000471572 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
NF1-208ENST00000471572 HRCP23327 699 aa11.01□□□□□ -0.65
NF1-208ENST00000471572 ZC3H15Q8WU90 426 aaKnown RBP10.99□□□□□ -0.65
NF1-208ENST00000471572 CAPN15O75808 1086 aa10.99□□□□□ -0.65
NF1-208ENST00000471572 ABCB7O75027 752 aa10.98□□□□□ -0.65
NF1-208ENST00000471572 SLC24A3Q9HC58 644 aa10.98□□□□□ -0.65
NF1-208ENST00000471572 GSE1Q14687 1217 aa10.96□□□□□ -0.65
NF1-208ENST00000471572 CADPS2Q86UW7 1296 aa10.96□□□□□ -0.65
NF1-208ENST00000471572 NPM2Q86SE8 214 aaKnown RBP10.96□□□□□ -0.66
NF1-208ENST00000471572 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
NF1-208ENST00000471572 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
NF1-208ENST00000471572 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
NF1-208ENST00000471572 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
NF1-208ENST00000471572 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
NF1-208ENST00000471572 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
NF1-208ENST00000471572 NUBP1P53384 320 aa10.93□□□□□ -0.66
NF1-208ENST00000471572 BCL11BQ9C0K0 894 aaPredicted RBP10.91□□□□□ -0.66
NF1-208ENST00000471572 STK24Q9Y6E0 443 aa10.89□□□□□ -0.67
NF1-208ENST00000471572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
NF1-208ENST00000471572 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
NF1-208ENST00000471572 RYDENQ9NUL5 291 aaKnown RBP10.87□□□□□ -0.67
NF1-208ENST00000471572 ZMYND15Q9H091 742 aa10.86□□□□□ -0.67
NF1-208ENST00000471572 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
NF1-208ENST00000471572 DCAF8Q5TAQ9 597 aa10.84□□□□□ -0.67
NF1-208ENST00000471572 SGIP1Q9BQI5 828 aa10.84□□□□□ -0.67
NF1-208ENST00000471572 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
NF1-208ENST00000471572 C1orf115Q9H7X2 142 aa10.82□□□□□ -0.68
NF1-208ENST00000471572 SEMA3EO15041 775 aa10.8□□□□□ -0.68
NF1-208ENST00000471572 ZMYND10O75800 440 aa10.79□□□□□ -0.68
NF1-208ENST00000471572 ARID3AQ99856 593 aa10.79□□□□□ -0.68
NF1-208ENST00000471572 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
NF1-208ENST00000471572 ARHGEF1Q92888 912 aaKnown RBP10.76□□□□□ -0.69
NF1-208ENST00000471572 GPBP1L1Q9HC44 474 aaPredicted RBP10.76□□□□□ -0.69
NF1-208ENST00000471572 CHRM1P11229 460 aaPredicted RBP10.75□□□□□ -0.69
NF1-208ENST00000471572 RNF39Q9H2S5 420 aa10.72□□□□□ -0.69
NF1-208ENST00000471572 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
NF1-208ENST00000471572 IL27Q8NEV9 243 aa10.69□□□□□ -0.7
NF1-208ENST00000471572 BARGINQ6ZT62 677 aa10.67□□□□□ -0.7
NF1-208ENST00000471572 ARID3CA6NKF2 412 aa10.66□□□□□ -0.7
NF1-208ENST00000471572 E2F4Q16254 413 aa10.65□□□□□ -0.7
NF1-208ENST00000471572 RASEFQ8IZ41 740 aa10.65□□□□□ -0.7
NF1-208ENST00000471572 PYGBP11216 843 aa10.64□□□□□ -0.71
NF1-208ENST00000471572 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
NF1-208ENST00000471572 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
NF1-208ENST00000471572 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
NF1-208ENST00000471572 KDM4CQ9H3R0 1056 aa10.62□□□□□ -0.71
NF1-208ENST00000471572 DSG3P32926 999 aa10.6□□□□□ -0.71
NF1-208ENST00000471572 AK7Q96M32 723 aa10.59□□□□□ -0.71
NF1-208ENST00000471572 APBB1O00213 710 aa10.58□□□□□ -0.72
NF1-208ENST00000471572 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
NF1-208ENST00000471572 CCDC9Q9Y3X0 531 aaKnown RBP10.57□□□□□ -0.72
NF1-208ENST00000471572 PPP1R37O75864 691 aa10.55□□□□□ -0.72
NF1-208ENST00000471572 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
NF1-208ENST00000471572 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
NF1-208ENST00000471572 PDIA4P13667 645 aaKnown RBP10.53□□□□□ -0.72
NF1-208ENST00000471572 ZBTB7CA1YPR0 619 aa10.53□□□□□ -0.72
NF1-208ENST00000471572 SMYD5Q6GMV2 418 aa10.5□□□□□ -0.73
NF1-208ENST00000471572 TRIM66O15016 1216 aa10.5□□□□□ -0.73
NF1-208ENST00000471572 PDE4DQ08499 809 aa10.5□□□□□ -0.73
NF1-208ENST00000471572 RBM26Q5T8P6 1007 aaKnown RBP10.5□□□□□ -0.73
NF1-208ENST00000471572 FAM117AQ9C073 453 aa10.48□□□□□ -0.73
NF1-208ENST00000471572 NCKAP5LQ9HCH0 1330 aa10.48□□□□□ -0.73
NF1-208ENST00000471572 CCDC82Q8N4S0 544 aa10.46□□□□□ -0.74
NF1-208ENST00000471572 KRI1Q8N9T8 703 aaKnown RBP10.46□□□□□ -0.74
NF1-208ENST00000471572 GPIHBP1Q8IV16 184 aa10.45□□□□□ -0.74
NF1-208ENST00000471572 PLEKHG3A1L390 1219 aa10.43□□□□□ -0.74
NF1-208ENST00000471572 MLLT3P42568 568 aaPredicted RBP10.43□□□□□ -0.74
NF1-208ENST00000471572 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
NF1-208ENST00000471572 ARIH1Q9Y4X5 557 aaPredicted RBP10.43□□□□□ -0.74
NF1-208ENST00000471572 ZNF316A6NFI3 1004 aaPredicted RBP10.41□□□□□ -0.74
NF1-208ENST00000471572 PDAP1Q13442 181 aaKnown RBP10.41□□□□□ -0.74
NF1-208ENST00000471572 FBXO22Q8NEZ5 403 aa10.41□□□□□ -0.74
NF1-208ENST00000471572 ZNF467Q7Z7K2 595 aaPredicted RBP10.39□□□□□ -0.75
NF1-208ENST00000471572 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
NF1-208ENST00000471572 CLUAP1Q96AJ1 413 aa10.38□□□□□ -0.75
NF1-208ENST00000471572 FLIIQ13045 1269 aa10.38□□□□□ -0.75
NF1-208ENST00000471572 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
NF1-208ENST00000471572 PCDHB13Q9Y5F0 798 aa10.38□□□□□ -0.75
NF1-208ENST00000471572 MFSD10Q14728 455 aa10.37□□□□□ -0.75
NF1-208ENST00000471572 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
NF1-208ENST00000471572 TRAK2O60296 914 aa10.34□□□□□ -0.75
NF1-208ENST00000471572 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
NF1-208ENST00000471572 CAMK2BQ13554 666 aa10.34□□□□□ -0.75
NF1-208ENST00000471572 A6NJR5 290 aa10.33□□□□□ -0.76
NF1-208ENST00000471572 SPDYE1Q8NFV5 336 aaPredicted RBP10.33□□□□□ -0.76
NF1-208ENST00000471572 GPR37O15354 613 aa10.32□□□□□ -0.76
NF1-208ENST00000471572 PSEN1P49768 467 aa10.32□□□□□ -0.76
NF1-208ENST00000471572 CRISPLD2Q9H0B8 497 aa10.32□□□□□ -0.76
NF1-208ENST00000471572 PHF8Q9UPP1 1060 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms