RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 SLC39A7Q92504 469 aa15.14■□□□□ 0.01
CLIP4-209ENST00000471165 FAM163AQ96GL9 167 aaPredicted RBP15.12■□□□□ 0.01
CLIP4-209ENST00000471165 ATMINO43313 823 aaPredicted RBP15.11■□□□□ 0.01
CLIP4-209ENST00000471165 MS4A3Q96HJ5 214 aa15.09■□□□□ 0.01
CLIP4-209ENST00000471165 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
CLIP4-209ENST00000471165 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
CLIP4-209ENST00000471165 SCUBE2Q9NQ36 999 aa15.01□□□□□ -0.01
CLIP4-209ENST00000471165 ATN1P54259 1190 aaPredicted RBP14.92□□□□□ -0.02
CLIP4-209ENST00000471165 POTEFA5A3E0 1075 aa14.86□□□□□ -0.03
CLIP4-209ENST00000471165 CDAN1Q8IWY9 1227 aa14.85□□□□□ -0.03
CLIP4-209ENST00000471165 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
CLIP4-209ENST00000471165 TSPYL2Q9H2G4 693 aaPredicted RBP14.79□□□□□ -0.04
CLIP4-209ENST00000471165 BMP2KQ9NSY1 1161 aaPredicted RBP14.78□□□□□ -0.04
CLIP4-209ENST00000471165 CCDC61Q9Y6R9 512 aa14.76□□□□□ -0.05
CLIP4-209ENST00000471165 KIF12Q96FN5 646 aa14.74□□□□□ -0.05
CLIP4-209ENST00000471165 TRPC6Q9Y210 931 aa14.72□□□□□ -0.05
CLIP4-209ENST00000471165 COLQQ9Y215 455 aaPredicted RBP14.68□□□□□ -0.06
CLIP4-209ENST00000471165 TIE1P35590 1138 aa14.65□□□□□ -0.06
CLIP4-209ENST00000471165 SEC24BO95487 1268 aa14.64□□□□□ -0.07
CLIP4-209ENST00000471165 MAP3K13O43283 966 aa14.6□□□□□ -0.07
CLIP4-209ENST00000471165 ST18O60284 1047 aa14.6□□□□□ -0.07
CLIP4-209ENST00000471165 TTLL13PA6NNM8 815 aa14.57□□□□□ -0.08
CLIP4-209ENST00000471165 MMRN1Q13201 1228 aa14.56□□□□□ -0.08
CLIP4-209ENST00000471165 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
CLIP4-209ENST00000471165 SPNS2Q8IVW8 549 aa14.52□□□□□ -0.09
CLIP4-209ENST00000471165 IER5LQ5T953 404 aa14.5□□□□□ -0.09
CLIP4-209ENST00000471165 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
CLIP4-209ENST00000471165 TRIM35Q9UPQ4 493 aa14.47□□□□□ -0.09
CLIP4-209ENST00000471165 RASEFQ8IZ41 740 aa14.43□□□□□ -0.1
CLIP4-209ENST00000471165 TMEM121BQ9BXQ6 578 aaPredicted RBP14.36□□□□□ -0.11
CLIP4-209ENST00000471165 PROM2Q8N271 834 aa14.34□□□□□ -0.11
CLIP4-209ENST00000471165 SGIP1Q9BQI5 828 aa14.34□□□□□ -0.11
CLIP4-209ENST00000471165 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
CLIP4-209ENST00000471165 PLCG2P16885 1265 aa14.3□□□□□ -0.12
CLIP4-209ENST00000471165 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
CLIP4-209ENST00000471165 MARVELD3Q96A59 401 aa14.27□□□□□ -0.13
CLIP4-209ENST00000471165 MIER1Q8N108 512 aa14.26□□□□□ -0.13
CLIP4-209ENST00000471165 SNPHO15079 494 aa14.24□□□□□ -0.13
CLIP4-209ENST00000471165 IRX5P78411 483 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-209ENST00000471165 TMEM106CQ9BVX2 250 aa14.24□□□□□ -0.13
CLIP4-209ENST00000471165 IFNL1Q8IU54 200 aa14.23□□□□□ -0.13
CLIP4-209ENST00000471165 OCEL1Q9H607 264 aa14.14□□□□□ -0.15
CLIP4-209ENST00000471165 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.14□□□□□ -0.15
CLIP4-209ENST00000471165 NUBP1P53384 320 aa14.09□□□□□ -0.15
CLIP4-209ENST00000471165 KRTAP3-3Q9BYR6 98 aa14.09□□□□□ -0.15
CLIP4-209ENST00000471165 KRTAP3-2Q9BYR7 98 aa14.09□□□□□ -0.15
CLIP4-209ENST00000471165 EMP3P54852 163 aa14.08□□□□□ -0.16
CLIP4-209ENST00000471165 POTEB3A0JP26 581 aa14.05□□□□□ -0.16
CLIP4-209ENST00000471165 POTEBQ6S5H4 581 aa14.05□□□□□ -0.16
CLIP4-209ENST00000471165 PLCD3Q8N3E9 789 aa14.02□□□□□ -0.17
CLIP4-209ENST00000471165 HS3ST6Q96QI5 342 aa14.02□□□□□ -0.17
CLIP4-209ENST00000471165 FAM212AQ96EL1 285 aa13.98□□□□□ -0.17
CLIP4-209ENST00000471165 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
CLIP4-209ENST00000471165 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
CLIP4-209ENST00000471165 C3orf67Q6ZVT6 689 aa13.92□□□□□ -0.18
CLIP4-209ENST00000471165 PDCD7Q8N8D1 485 aaKnown RBP13.89□□□□□ -0.19
CLIP4-209ENST00000471165 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
CLIP4-209ENST00000471165 PCDHB8Q9UN66 801 aa13.85□□□□□ -0.19
CLIP4-209ENST00000471165 PYGBP11216 843 aa13.83□□□□□ -0.2
CLIP4-209ENST00000471165 L3MBTL3Q96JM7 780 aaPredicted RBP13.83□□□□□ -0.2
CLIP4-209ENST00000471165 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
CLIP4-209ENST00000471165 RNF166Q96A37 237 aaPredicted RBP13.75□□□□□ -0.21
CLIP4-209ENST00000471165 MKRN3Q13064 507 aaKnown RBP13.72□□□□□ -0.21
CLIP4-209ENST00000471165 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
CLIP4-209ENST00000471165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLIP4-209ENST00000471165 HOXB3P14651 431 aaPredicted RBP13.68□□□□□ -0.22
CLIP4-209ENST00000471165 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
CLIP4-209ENST00000471165 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
CLIP4-209ENST00000471165 ERBB3P21860 1342 aa13.63□□□□□ -0.23
CLIP4-209ENST00000471165 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
CLIP4-209ENST00000471165 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
CLIP4-209ENST00000471165 ZNF710Q8N1W2 664 aa13.59□□□□□ -0.23
CLIP4-209ENST00000471165 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.24
CLIP4-209ENST00000471165 PSEN1P49768 467 aa13.53□□□□□ -0.24
CLIP4-209ENST00000471165 DOK7Q18PE1 504 aa13.53□□□□□ -0.24
CLIP4-209ENST00000471165 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
CLIP4-209ENST00000471165 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
CLIP4-209ENST00000471165 G3V3G9 751 aa13.49□□□□□ -0.25
CLIP4-209ENST00000471165 ZNF687Q8N1G0 1237 aa13.44□□□□□ -0.26
CLIP4-209ENST00000471165 GSE1Q14687 1217 aa13.43□□□□□ -0.26
CLIP4-209ENST00000471165 RIMBP2O15034 1052 aa13.42□□□□□ -0.26
CLIP4-209ENST00000471165 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-209ENST00000471165 PTGER2P43116 358 aa13.42□□□□□ -0.26
CLIP4-209ENST00000471165 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
CLIP4-209ENST00000471165 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
CLIP4-209ENST00000471165 ZSWIM6Q9HCJ5 1215 aa13.33□□□□□ -0.28
CLIP4-209ENST00000471165 ANKRD13DQ6ZTN6 518 aa13.31□□□□□ -0.28
CLIP4-209ENST00000471165 GPR153Q6NV75 609 aa13.29□□□□□ -0.28
CLIP4-209ENST00000471165 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
CLIP4-209ENST00000471165 TMEM92Q6UXU6 159 aa13.24□□□□□ -0.29
CLIP4-209ENST00000471165 PLA2G2EQ9NZK7 142 aa13.23□□□□□ -0.29
CLIP4-209ENST00000471165 FKBP8Q14318 412 aa13.21□□□□□ -0.29
CLIP4-209ENST00000471165 LSM11P83369 360 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLIP4-209ENST00000471165 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
CLIP4-209ENST00000471165 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
CLIP4-209ENST00000471165 MICALL2Q8IY33 904 aa13.15□□□□□ -0.3
CLIP4-209ENST00000471165 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
CLIP4-209ENST00000471165 EFCAB3Q8N7B9 438 aa13.11□□□□□ -0.31
CLIP4-209ENST00000471165 KHSRPQ92945 711 aaKnown RBP eCLIP13.09□□□□□ -0.31
CLIP4-209ENST00000471165 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms