RNA–Protein interactions for RNA: ENST00000470736.1

UBE4B-207, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-207ENST00000470736 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
UBE4B-207ENST00000470736 DCBLD2Q96PD2 775 aa9.99□□□□□ -0.81
UBE4B-207ENST00000470736 ZRANB1Q9UGI0 708 aa9.99□□□□□ -0.81
UBE4B-207ENST00000470736 SMARCA4P51532 1647 aa9.98□□□□□ -0.81
UBE4B-207ENST00000470736 NPM1P06748 294 aaKnown RBP eCLIP9.97□□□□□ -0.81
UBE4B-207ENST00000470736 POTEIP0CG38 1075 aa9.97□□□□□ -0.81
UBE4B-207ENST00000470736 BAZ1AQ9NRL2 1556 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-207ENST00000470736 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
UBE4B-207ENST00000470736 ATAD2BQ9ULI0 1458 aa9.91□□□□□ -0.82
UBE4B-207ENST00000470736 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
UBE4B-207ENST00000470736 BAZ1BQ9UIG0 1483 aaKnown RBP9.88□□□□□ -0.83
UBE4B-207ENST00000470736 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
UBE4B-207ENST00000470736 PROM2Q8N271 834 aa9.86□□□□□ -0.83
UBE4B-207ENST00000470736 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-207ENST00000470736 HMGXB3Q12766 1538 aa9.85□□□□□ -0.83
UBE4B-207ENST00000470736 GALR2O43603 387 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-207ENST00000470736 WIZO95785 1651 aa9.82□□□□□ -0.84
UBE4B-207ENST00000470736 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
UBE4B-207ENST00000470736 PHF12Q96QT6 1004 aa9.78□□□□□ -0.84
UBE4B-207ENST00000470736 ERCC6Q03468 1493 aa9.76□□□□□ -0.85
UBE4B-207ENST00000470736 RSF1Q96T23 1441 aaPredicted RBP9.75□□□□□ -0.85
UBE4B-207ENST00000470736 PLEKHG5O94827 1062 aa9.75□□□□□ -0.85
UBE4B-207ENST00000470736 ASTLQ6HA08 431 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-207ENST00000470736 NESP48681 1621 aa9.72□□□□□ -0.85
UBE4B-207ENST00000470736 C7P10643 843 aa9.7□□□□□ -0.86
UBE4B-207ENST00000470736 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
UBE4B-207ENST00000470736 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
UBE4B-207ENST00000470736 MS4A3Q96HJ5 214 aa9.68□□□□□ -0.86
UBE4B-207ENST00000470736 PLSCR2Q9NRY7 297 aa9.68□□□□□ -0.86
UBE4B-207ENST00000470736 OTUD5Q96G74 571 aa9.67□□□□□ -0.86
UBE4B-207ENST00000470736 LAMC3Q9Y6N6 1575 aa9.67□□□□□ -0.86
UBE4B-207ENST00000470736 ATMINO43313 823 aaPredicted RBP9.66□□□□□ -0.86
UBE4B-207ENST00000470736 MAMSTRQ6ZN01 415 aa9.66□□□□□ -0.86
UBE4B-207ENST00000470736 CCDC61Q9Y6R9 512 aa9.66□□□□□ -0.86
UBE4B-207ENST00000470736 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
UBE4B-207ENST00000470736 SUPT5HO00267 1087 aaKnown RBP9.63□□□□□ -0.87
UBE4B-207ENST00000470736 PELP1Q8IZL8 1130 aaKnown RBP9.63□□□□□ -0.87
UBE4B-207ENST00000470736 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-207ENST00000470736 KIF21AQ7Z4S6 1674 aa9.62□□□□□ -0.87
UBE4B-207ENST00000470736 KIF12Q96FN5 646 aa9.62□□□□□ -0.87
UBE4B-207ENST00000470736 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-207ENST00000470736 PDS5BQ9NTI5 1447 aa9.62□□□□□ -0.87
UBE4B-207ENST00000470736 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
UBE4B-207ENST00000470736 POTEB2H3BUK9 544 aa9.61□□□□□ -0.87
UBE4B-207ENST00000470736 MIER1Q8N108 512 aa9.61□□□□□ -0.87
UBE4B-207ENST00000470736 TIE1P35590 1138 aa9.58□□□□□ -0.88
UBE4B-207ENST00000470736 SGIP1Q9BQI5 828 aa9.58□□□□□ -0.88
UBE4B-207ENST00000470736 CCDC88BA6NC98 1476 aa9.57□□□□□ -0.88
UBE4B-207ENST00000470736 CUX2O14529 1486 aa9.57□□□□□ -0.88
UBE4B-207ENST00000470736 CEP164Q9UPV0 1460 aa9.55□□□□□ -0.88
UBE4B-207ENST00000470736 PCDH10Q9P2E7 1040 aa9.55□□□□□ -0.88
UBE4B-207ENST00000470736 THOC2Q8NI27 1593 aaKnown RBP9.54□□□□□ -0.88
UBE4B-207ENST00000470736 FANCD2Q9BXW9 1451 aa9.54□□□□□ -0.88
UBE4B-207ENST00000470736 CFTRP13569 1480 aa9.53□□□□□ -0.88
UBE4B-207ENST00000470736 ATN1P54259 1190 aaPredicted RBP9.53□□□□□ -0.88
UBE4B-207ENST00000470736 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
UBE4B-207ENST00000470736 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
UBE4B-207ENST00000470736 MRC2Q9UBG0 1479 aa9.53□□□□□ -0.88
UBE4B-207ENST00000470736 PRDM2Q13029 1718 aa9.52□□□□□ -0.89
UBE4B-207ENST00000470736 RASEFQ8IZ41 740 aa9.52□□□□□ -0.89
UBE4B-207ENST00000470736 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
UBE4B-207ENST00000470736 MAP3K13O43283 966 aa9.5□□□□□ -0.89
UBE4B-207ENST00000470736 POTEMA6NI47 508 aa9.49□□□□□ -0.89
UBE4B-207ENST00000470736 IER5LQ5T953 404 aa9.49□□□□□ -0.89
UBE4B-207ENST00000470736 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
UBE4B-207ENST00000470736 WDR62O43379 1518 aa9.46□□□□□ -0.89
UBE4B-207ENST00000470736 POTEJP0CG39 1038 aa9.46□□□□□ -0.9
UBE4B-207ENST00000470736 TTLL13PA6NNM8 815 aa9.44□□□□□ -0.9
UBE4B-207ENST00000470736 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
UBE4B-207ENST00000470736 URB2Q14146 1524 aaKnown RBP9.43□□□□□ -0.9
UBE4B-207ENST00000470736 NUBP1P53384 320 aa9.43□□□□□ -0.9
UBE4B-207ENST00000470736 SEC24BO95487 1268 aa9.42□□□□□ -0.9
UBE4B-207ENST00000470736 PCDHB13Q9Y5F0 798 aa9.42□□□□□ -0.9
UBE4B-207ENST00000470736 TRPC6Q9Y210 931 aa9.41□□□□□ -0.9
UBE4B-207ENST00000470736 POTEFA5A3E0 1075 aa9.4□□□□□ -0.9
UBE4B-207ENST00000470736 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
UBE4B-207ENST00000470736 TOPBP1Q92547 1522 aa9.37□□□□□ -0.91
UBE4B-207ENST00000470736 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
UBE4B-207ENST00000470736 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
UBE4B-207ENST00000470736 DNMBPQ6XZF7 1577 aa9.37□□□□□ -0.91
UBE4B-207ENST00000470736 FKBP8Q14318 412 aa9.35□□□□□ -0.91
UBE4B-207ENST00000470736 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-207ENST00000470736 IFNL1Q8IU54 200 aa9.33□□□□□ -0.92
UBE4B-207ENST00000470736 FAM163AQ96GL9 167 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-207ENST00000470736 IFT140Q96RY7 1462 aa9.32□□□□□ -0.92
UBE4B-207ENST00000470736 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
UBE4B-207ENST00000470736 TMEM106CQ9BVX2 250 aa9.31□□□□□ -0.92
UBE4B-207ENST00000470736 PLCG2P16885 1265 aa9.3□□□□□ -0.92
UBE4B-207ENST00000470736 DNAJC5Q9H3Z4 198 aa9.3□□□□□ -0.92
UBE4B-207ENST00000470736 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-207ENST00000470736 FGD5Q6ZNL6 1462 aa9.28□□□□□ -0.92
UBE4B-207ENST00000470736 CUX1P39880 1505 aa9.28□□□□□ -0.92
UBE4B-207ENST00000470736 ZNF608Q9ULD9 1512 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-207ENST00000470736 RAD54L2Q9Y4B4 1467 aa9.28□□□□□ -0.92
UBE4B-207ENST00000470736 SOGA1O94964 1423 aa9.27□□□□□ -0.93
UBE4B-207ENST00000470736 EIF4G3O43432 1585 aaKnown RBP9.27□□□□□ -0.93
UBE4B-207ENST00000470736 DCAF8Q5TAQ9 597 aa9.26□□□□□ -0.93
UBE4B-207ENST00000470736 TARBP1Q13395 1621 aaKnown RBP9.25□□□□□ -0.93
UBE4B-207ENST00000470736 IRX5P78411 483 aaPredicted RBP9.25□□□□□ -0.93
UBE4B-207ENST00000470736 AQRO60306 1485 aaKnown RBP eCLIP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms