RNA–Protein interactions for RNA: ENST00000470498.1

RNF220-207, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-207ENST00000470498 PELP1Q8IZL8 1130 aaKnown RBP10.26□□□□□ -0.77
RNF220-207ENST00000470498 PHF12Q96QT6 1004 aa10.24□□□□□ -0.77
RNF220-207ENST00000470498 PLCD3Q8N3E9 789 aa10.21□□□□□ -0.77
RNF220-207ENST00000470498 POTEJP0CG39 1038 aa10.2□□□□□ -0.78
RNF220-207ENST00000470498 MIER1Q8N108 512 aa10.2□□□□□ -0.78
RNF220-207ENST00000470498 PCDH10Q9P2E7 1040 aa10.2□□□□□ -0.78
RNF220-207ENST00000470498 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
RNF220-207ENST00000470498 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
RNF220-207ENST00000470498 PLEKHG5O94827 1062 aa10.16□□□□□ -0.78
RNF220-207ENST00000470498 METRNQ9UJH8 293 aa10.14□□□□□ -0.79
RNF220-207ENST00000470498 KLHL34Q8N239 644 aa10.13□□□□□ -0.79
RNF220-207ENST00000470498 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
RNF220-207ENST00000470498 AMER1Q5JTC6 1135 aaPredicted RBP10.11□□□□□ -0.79
RNF220-207ENST00000470498 ASTLQ6HA08 431 aaPredicted RBP10.11□□□□□ -0.79
RNF220-207ENST00000470498 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
RNF220-207ENST00000470498 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
RNF220-207ENST00000470498 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
RNF220-207ENST00000470498 RB1CC1Q8TDY2 1594 aa10.08□□□□□ -0.8
RNF220-207ENST00000470498 SLC39A7Q92504 469 aa10.07□□□□□ -0.8
RNF220-207ENST00000470498 RTN4Q9NQC3 1192 aaKnown RBP10.07□□□□□ -0.8
RNF220-207ENST00000470498 DCAF8L2P0C7V8 631 aa10.06□□□□□ -0.8
RNF220-207ENST00000470498 C7P10643 843 aa10.05□□□□□ -0.8
RNF220-207ENST00000470498 MNX1P50219 401 aaPredicted RBP10.05□□□□□ -0.8
RNF220-207ENST00000470498 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
RNF220-207ENST00000470498 FAM163AQ96GL9 167 aaPredicted RBP10.05□□□□□ -0.8
RNF220-207ENST00000470498 NACADO15069 1562 aa10.03□□□□□ -0.8
RNF220-207ENST00000470498 MAMSTRQ6ZN01 415 aa10.03□□□□□ -0.8
RNF220-207ENST00000470498 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
RNF220-207ENST00000470498 SCUBE2Q9NQ36 999 aa9.97□□□□□ -0.81
RNF220-207ENST00000470498 POTEFA5A3E0 1075 aa9.96□□□□□ -0.82
RNF220-207ENST00000470498 ATN1P54259 1190 aaPredicted RBP9.95□□□□□ -0.82
RNF220-207ENST00000470498 NUBP1P53384 320 aa9.93□□□□□ -0.82
RNF220-207ENST00000470498 MYO15BQ96JP2 1530 aa9.91□□□□□ -0.82
RNF220-207ENST00000470498 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
RNF220-207ENST00000470498 PKD2Q13563 968 aa9.88□□□□□ -0.83
RNF220-207ENST00000470498 CIZ1Q9ULV3 898 aaPredicted RBP9.88□□□□□ -0.83
RNF220-207ENST00000470498 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
RNF220-207ENST00000470498 FAM212AQ96EL1 285 aa9.87□□□□□ -0.83
RNF220-207ENST00000470498 TRPC6Q9Y210 931 aa9.87□□□□□ -0.83
RNF220-207ENST00000470498 GSE1Q14687 1217 aa9.86□□□□□ -0.83
RNF220-207ENST00000470498 BMP2KQ9NSY1 1161 aaPredicted RBP9.86□□□□□ -0.83
RNF220-207ENST00000470498 CCDC61Q9Y6R9 512 aa9.85□□□□□ -0.83
RNF220-207ENST00000470498 DCAF8Q5TAQ9 597 aa9.84□□□□□ -0.83
RNF220-207ENST00000470498 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
RNF220-207ENST00000470498 ECM2O94769 699 aaPredicted RBP9.82□□□□□ -0.84
RNF220-207ENST00000470498 KIF12Q96FN5 646 aa9.82□□□□□ -0.84
RNF220-207ENST00000470498 COLQQ9Y215 455 aaPredicted RBP9.81□□□□□ -0.84
RNF220-207ENST00000470498 UNC13AQ9UPW8 1703 aa9.8□□□□□ -0.84
RNF220-207ENST00000470498 BICRAQ9NZM4 1560 aa9.8□□□□□ -0.84
RNF220-207ENST00000470498 TRIM41Q8WV44 630 aa9.79□□□□□ -0.84
RNF220-207ENST00000470498 TIE1P35590 1138 aa9.75□□□□□ -0.85
RNF220-207ENST00000470498 DCAF1Q9Y4B6 1507 aa9.75□□□□□ -0.85
RNF220-207ENST00000470498 MAP3K13O43283 966 aa9.73□□□□□ -0.85
RNF220-207ENST00000470498 ST18O60284 1047 aa9.73□□□□□ -0.85
RNF220-207ENST00000470498 TTLL13PA6NNM8 815 aa9.71□□□□□ -0.86
RNF220-207ENST00000470498 RGL2O15211 777 aa9.71□□□□□ -0.86
RNF220-207ENST00000470498 PYGBP11216 843 aa9.71□□□□□ -0.86
RNF220-207ENST00000470498 MMRN1Q13201 1228 aa9.71□□□□□ -0.86
RNF220-207ENST00000470498 ZCCHC6Q5VYS8 1495 aaKnown RBP9.71□□□□□ -0.86
RNF220-207ENST00000470498 SEC24BO95487 1268 aa9.7□□□□□ -0.86
RNF220-207ENST00000470498 CHRM1P11229 460 aaPredicted RBP9.7□□□□□ -0.86
RNF220-207ENST00000470498 SPNS2Q8IVW8 549 aa9.67□□□□□ -0.86
RNF220-207ENST00000470498 SLAIN1Q8ND83 568 aa9.66□□□□□ -0.86
RNF220-207ENST00000470498 RNF25Q96BH1 459 aaPredicted RBP9.66□□□□□ -0.86
RNF220-207ENST00000470498 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
RNF220-207ENST00000470498 TRIM35Q9UPQ4 493 aa9.64□□□□□ -0.87
RNF220-207ENST00000470498 RIOK3O14730 519 aaKnown RBP9.63□□□□□ -0.87
RNF220-207ENST00000470498 IER5LQ5T953 404 aa9.63□□□□□ -0.87
RNF220-207ENST00000470498 ZNF467Q7Z7K2 595 aaPredicted RBP9.59□□□□□ -0.87
RNF220-207ENST00000470498 TAOK2Q9UL54 1235 aa9.59□□□□□ -0.87
RNF220-207ENST00000470498 PCDHB13Q9Y5F0 798 aa9.59□□□□□ -0.87
RNF220-207ENST00000470498 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
RNF220-207ENST00000470498 CC2D2AQ9P2K1 1620 aa9.57□□□□□ -0.88
RNF220-207ENST00000470498 SGIP1Q9BQI5 828 aa9.57□□□□□ -0.88
RNF220-207ENST00000470498 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
RNF220-207ENST00000470498 PCDHB8Q9UN66 801 aa9.56□□□□□ -0.88
RNF220-207ENST00000470498 SCRIBQ14160 1630 aa9.56□□□□□ -0.88
RNF220-207ENST00000470498 IFNL1Q8IU54 200 aa9.54□□□□□ -0.88
RNF220-207ENST00000470498 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
RNF220-207ENST00000470498 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
RNF220-207ENST00000470498 TMEM121BQ9BXQ6 578 aaPredicted RBP9.53□□□□□ -0.88
RNF220-207ENST00000470498 MARVELD3Q96A59 401 aa9.52□□□□□ -0.89
RNF220-207ENST00000470498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.51□□□□□ -0.89
RNF220-207ENST00000470498 PLCG2P16885 1265 aa9.51□□□□□ -0.89
RNF220-207ENST00000470498 PDAP1Q13442 181 aaKnown RBP9.51□□□□□ -0.89
RNF220-207ENST00000470498 HS6ST3Q8IZP7 471 aa9.51□□□□□ -0.89
RNF220-207ENST00000470498 ZFP91Q96JP5 570 aaPredicted RBP9.51□□□□□ -0.89
RNF220-207ENST00000470498 STK25O00506 426 aa9.5□□□□□ -0.89
RNF220-207ENST00000470498 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
RNF220-207ENST00000470498 PSEN1P49768 467 aa9.48□□□□□ -0.89
RNF220-207ENST00000470498 TMEM106CQ9BVX2 250 aa9.48□□□□□ -0.89
RNF220-207ENST00000470498 BCL11BQ9C0K0 894 aaPredicted RBP9.47□□□□□ -0.89
RNF220-207ENST00000470498 BBXQ8WY36 941 aaPredicted RBP9.46□□□□□ -0.9
RNF220-207ENST00000470498 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
RNF220-207ENST00000470498 SNPHO15079 494 aa9.42□□□□□ -0.9
RNF220-207ENST00000470498 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
RNF220-207ENST00000470498 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
RNF220-207ENST00000470498 DNAJC5Q9H3Z4 198 aa9.42□□□□□ -0.9
RNF220-207ENST00000470498 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
RNF220-207ENST00000470498 POTEB3A0JP26 581 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms