RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
SSB-208ENST00000468600 ATMINO43313 823 aaPredicted RBP14.17□□□□□ -0.14
SSB-208ENST00000468600 LCE2DQ5TA82 110 aaPredicted RBP14.16□□□□□ -0.14
SSB-208ENST00000468600 SLC39A7Q92504 469 aa14.14□□□□□ -0.15
SSB-208ENST00000468600 C7P10643 843 aa14.13□□□□□ -0.15
SSB-208ENST00000468600 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
SSB-208ENST00000468600 PCDH10Q9P2E7 1040 aa14.12□□□□□ -0.15
SSB-208ENST00000468600 MAMSTRQ6ZN01 415 aa14.05□□□□□ -0.16
SSB-208ENST00000468600 ATN1P54259 1190 aaPredicted RBP14.01□□□□□ -0.17
SSB-208ENST00000468600 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
SSB-208ENST00000468600 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
SSB-208ENST00000468600 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
SSB-208ENST00000468600 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
SSB-208ENST00000468600 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
SSB-208ENST00000468600 KIF12Q96FN5 646 aa13.92□□□□□ -0.18
SSB-208ENST00000468600 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
SSB-208ENST00000468600 TRPC6Q9Y210 931 aa13.92□□□□□ -0.18
SSB-208ENST00000468600 PROM2Q8N271 834 aa13.84□□□□□ -0.19
SSB-208ENST00000468600 TIE1P35590 1138 aa13.8□□□□□ -0.2
SSB-208ENST00000468600 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
SSB-208ENST00000468600 MAP3K13O43283 966 aa13.79□□□□□ -0.2
SSB-208ENST00000468600 TTLL13PA6NNM8 815 aa13.74□□□□□ -0.21
SSB-208ENST00000468600 RASEFQ8IZ41 740 aa13.73□□□□□ -0.21
SSB-208ENST00000468600 CDAN1Q8IWY9 1227 aa13.72□□□□□ -0.21
SSB-208ENST00000468600 SEC24BO95487 1268 aa13.67□□□□□ -0.22
SSB-208ENST00000468600 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
SSB-208ENST00000468600 IER5LQ5T953 404 aa13.63□□□□□ -0.23
SSB-208ENST00000468600 ST18O60284 1047 aa13.59□□□□□ -0.23
SSB-208ENST00000468600 MIER1Q8N108 512 aa13.56□□□□□ -0.24
SSB-208ENST00000468600 SLAIN1Q8ND83 568 aa13.56□□□□□ -0.24
SSB-208ENST00000468600 SGIP1Q9BQI5 828 aa13.55□□□□□ -0.24
SSB-208ENST00000468600 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
SSB-208ENST00000468600 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
SSB-208ENST00000468600 IFNL1Q8IU54 200 aa13.49□□□□□ -0.25
SSB-208ENST00000468600 NUBP1P53384 320 aa13.46□□□□□ -0.25
SSB-208ENST00000468600 MMRN1Q13201 1228 aa13.45□□□□□ -0.26
SSB-208ENST00000468600 TMEM106CQ9BVX2 250 aa13.45□□□□□ -0.26
SSB-208ENST00000468600 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
SSB-208ENST00000468600 PLCG2P16885 1265 aa13.43□□□□□ -0.26
SSB-208ENST00000468600 SPNS2Q8IVW8 549 aa13.42□□□□□ -0.26
SSB-208ENST00000468600 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
SSB-208ENST00000468600 TMEM121BQ9BXQ6 578 aaPredicted RBP13.38□□□□□ -0.27
SSB-208ENST00000468600 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
SSB-208ENST00000468600 OCEL1Q9H607 264 aa13.31□□□□□ -0.28
SSB-208ENST00000468600 FAM212AQ96EL1 285 aa13.3□□□□□ -0.28
SSB-208ENST00000468600 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
SSB-208ENST00000468600 SNPHO15079 494 aa13.25□□□□□ -0.29
SSB-208ENST00000468600 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.24□□□□□ -0.29
SSB-208ENST00000468600 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
SSB-208ENST00000468600 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
SSB-208ENST00000468600 PYGBP11216 843 aa13.16□□□□□ -0.3
SSB-208ENST00000468600 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
SSB-208ENST00000468600 KRTAP3-3Q9BYR6 98 aa13.16□□□□□ -0.3
SSB-208ENST00000468600 KRTAP3-2Q9BYR7 98 aa13.16□□□□□ -0.3
SSB-208ENST00000468600 PCDHB8Q9UN66 801 aa13.16□□□□□ -0.3
SSB-208ENST00000468600 EMP3P54852 163 aa13.13□□□□□ -0.31
SSB-208ENST00000468600 HS3ST6Q96QI5 342 aa13.09□□□□□ -0.31
SSB-208ENST00000468600 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
SSB-208ENST00000468600 FKBP8Q14318 412 aa13.07□□□□□ -0.32
SSB-208ENST00000468600 C3orf67Q6ZVT6 689 aa13.07□□□□□ -0.32
SSB-208ENST00000468600 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
SSB-208ENST00000468600 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
SSB-208ENST00000468600 MKRN3Q13064 507 aaKnown RBP12.96□□□□□ -0.33
SSB-208ENST00000468600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.343e-7■■□□□ 14.1
SSB-208ENST00000468600 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
SSB-208ENST00000468600 ZNF467Q7Z7K2 595 aaPredicted RBP12.93□□□□□ -0.34
SSB-208ENST00000468600 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
SSB-208ENST00000468600 HOXB3P14651 431 aaPredicted RBP12.9□□□□□ -0.34
SSB-208ENST00000468600 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
SSB-208ENST00000468600 PSEN1P49768 467 aa12.87□□□□□ -0.35
SSB-208ENST00000468600 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
SSB-208ENST00000468600 CHRM1P11229 460 aaPredicted RBP12.84□□□□□ -0.35
SSB-208ENST00000468600 GSE1Q14687 1217 aa12.82□□□□□ -0.36
SSB-208ENST00000468600 HOXB1P14653 301 aaPredicted RBP12.81□□□□□ -0.36
SSB-208ENST00000468600 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
SSB-208ENST00000468600 RNF166Q96A37 237 aaPredicted RBP12.77□□□□□ -0.37
SSB-208ENST00000468600 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
SSB-208ENST00000468600 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
SSB-208ENST00000468600 ERBB3P21860 1342 aa12.73□□□□□ -0.37
SSB-208ENST00000468600 ZNF710Q8N1W2 664 aa12.72□□□□□ -0.37
SSB-208ENST00000468600 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
SSB-208ENST00000468600 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.37
SSB-208ENST00000468600 DOK7Q18PE1 504 aa12.69□□□□□ -0.38
SSB-208ENST00000468600 VARS2Q5ST30 1063 aaKnown RBP12.68□□□□□ -0.38
SSB-208ENST00000468600 G3V3G9 751 aa12.67□□□□□ -0.38
SSB-208ENST00000468600 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
SSB-208ENST00000468600 TMEM92Q6UXU6 159 aa12.59□□□□□ -0.39
SSB-208ENST00000468600 ZNF687Q8N1G0 1237 aa12.59□□□□□ -0.39
SSB-208ENST00000468600 RIMBP2O15034 1052 aa12.58□□□□□ -0.4
SSB-208ENST00000468600 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
SSB-208ENST00000468600 ZSWIM6Q9HCJ5 1215 aa12.54□□□□□ -0.4
SSB-208ENST00000468600 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
SSB-208ENST00000468600 EFCAB3Q8N7B9 438 aa12.51□□□□□ -0.41
SSB-208ENST00000468600 PTGER2P43116 358 aa12.5□□□□□ -0.41
SSB-208ENST00000468600 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
SSB-208ENST00000468600 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
SSB-208ENST00000468600 ANKRD13DQ6ZTN6 518 aa12.42□□□□□ -0.42
SSB-208ENST00000468600 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
SSB-208ENST00000468600 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
SSB-208ENST00000468600 ARSIQ5FYB1 569 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms