RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
U2AF1-207ENST00000468039 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
U2AF1-207ENST00000468039 ASTLQ6HA08 431 aaPredicted RBP12.33□□□□□ -0.44
U2AF1-207ENST00000468039 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
U2AF1-207ENST00000468039 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
U2AF1-207ENST00000468039 MMRN1Q13201 1228 aa12.24□□□□□ -0.45
U2AF1-207ENST00000468039 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
U2AF1-207ENST00000468039 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
U2AF1-207ENST00000468039 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
U2AF1-207ENST00000468039 FKBP8Q14318 412 aa12.07□□□□□ -0.48
U2AF1-207ENST00000468039 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
U2AF1-207ENST00000468039 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
U2AF1-207ENST00000468039 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
U2AF1-207ENST00000468039 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
U2AF1-207ENST00000468039 ST18O60284 1047 aa12.01□□□□□ -0.49
U2AF1-207ENST00000468039 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
U2AF1-207ENST00000468039 NISCHQ9Y2I1 1504 aa11.93□□□□□ -0.5
U2AF1-207ENST00000468039 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
U2AF1-207ENST00000468039 SEC24BO95487 1268 aa11.89□□□□□ -0.51
U2AF1-207ENST00000468039 SLAIN1Q8ND83 568 aa11.86□□□□□ -0.51
U2AF1-207ENST00000468039 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
U2AF1-207ENST00000468039 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
U2AF1-207ENST00000468039 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
U2AF1-207ENST00000468039 TIE1P35590 1138 aa11.8□□□□□ -0.52
U2AF1-207ENST00000468039 IER5LQ5T953 404 aa11.74□□□□□ -0.53
U2AF1-207ENST00000468039 SNPHO15079 494 aa11.73□□□□□ -0.53
U2AF1-207ENST00000468039 PROM2Q8N271 834 aa11.73□□□□□ -0.53
U2AF1-207ENST00000468039 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
U2AF1-207ENST00000468039 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
U2AF1-207ENST00000468039 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-207ENST00000468039 FBXO3Q9UK99 471 aa11.69□□□□□ -0.54
U2AF1-207ENST00000468039 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
U2AF1-207ENST00000468039 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
U2AF1-207ENST00000468039 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
U2AF1-207ENST00000468039 TRIM35Q9UPQ4 493 aa11.59□□□□□ -0.55
U2AF1-207ENST00000468039 MAP3K13O43283 966 aa11.58□□□□□ -0.56
U2AF1-207ENST00000468039 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
U2AF1-207ENST00000468039 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
U2AF1-207ENST00000468039 EMP3P54852 163 aa11.54□□□□□ -0.56
U2AF1-207ENST00000468039 PLCG2P16885 1265 aa11.53□□□□□ -0.56
U2AF1-207ENST00000468039 HS3ST6Q96QI5 342 aa11.47□□□□□ -0.57
U2AF1-207ENST00000468039 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.47□□□□□ -0.57
U2AF1-207ENST00000468039 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
U2AF1-207ENST00000468039 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.57
U2AF1-207ENST00000468039 SGIP1Q9BQI5 828 aa11.45□□□□□ -0.58
U2AF1-207ENST00000468039 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
U2AF1-207ENST00000468039 MIER1Q8N108 512 aa11.42□□□□□ -0.58
U2AF1-207ENST00000468039 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
U2AF1-207ENST00000468039 RNF166Q96A37 237 aaPredicted RBP11.41□□□□□ -0.58
U2AF1-207ENST00000468039 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
U2AF1-207ENST00000468039 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
U2AF1-207ENST00000468039 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
U2AF1-207ENST00000468039 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
U2AF1-207ENST00000468039 PCDHB13Q9Y5F0 798 aa11.34□□□□□ -0.59
U2AF1-207ENST00000468039 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
U2AF1-207ENST00000468039 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
U2AF1-207ENST00000468039 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
U2AF1-207ENST00000468039 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
U2AF1-207ENST00000468039 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
U2AF1-207ENST00000468039 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
U2AF1-207ENST00000468039 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
U2AF1-207ENST00000468039 IFNL1Q8IU54 200 aa11.2□□□□□ -0.62
U2AF1-207ENST00000468039 SPOCK2Q92563 424 aa11.2□□□□□ -0.62
U2AF1-207ENST00000468039 PTGER2P43116 358 aa11.13□□□□□ -0.63
U2AF1-207ENST00000468039 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
U2AF1-207ENST00000468039 L3MBTL3Q96JM7 780 aaPredicted RBP11.11□□□□□ -0.63
U2AF1-207ENST00000468039 ERBB3P21860 1342 aa11.08□□□□□ -0.64
U2AF1-207ENST00000468039 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
U2AF1-207ENST00000468039 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
U2AF1-207ENST00000468039 NUBP1P53384 320 aa11.04□□□□□ -0.64
U2AF1-207ENST00000468039 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
U2AF1-207ENST00000468039 GSE1Q14687 1217 aa11.03□□□□□ -0.64
U2AF1-207ENST00000468039 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
U2AF1-207ENST00000468039 PDCD7Q8N8D1 485 aaKnown RBP11.01□□□□□ -0.65
U2AF1-207ENST00000468039 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
U2AF1-207ENST00000468039 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
U2AF1-207ENST00000468039 HOXB3P14651 431 aaPredicted RBP10.96□□□□□ -0.65
U2AF1-207ENST00000468039 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
U2AF1-207ENST00000468039 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
U2AF1-207ENST00000468039 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
U2AF1-207ENST00000468039 DOK7Q18PE1 504 aa10.92□□□□□ -0.66
U2AF1-207ENST00000468039 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
U2AF1-207ENST00000468039 ZNF687Q8N1G0 1237 aa10.91□□□□□ -0.66
U2AF1-207ENST00000468039 PKD2Q13563 968 aa10.89□□□□□ -0.67
U2AF1-207ENST00000468039 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
U2AF1-207ENST00000468039 RIMBP2O15034 1052 aa10.87□□□□□ -0.67
U2AF1-207ENST00000468039 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
U2AF1-207ENST00000468039 PYGBP11216 843 aa10.83□□□□□ -0.68
U2AF1-207ENST00000468039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.83□□□□□ -0.68
U2AF1-207ENST00000468039 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
U2AF1-207ENST00000468039 ANKRD13DQ6ZTN6 518 aa10.8□□□□□ -0.68
U2AF1-207ENST00000468039 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
U2AF1-207ENST00000468039 HCSTQ9UBK5 93 aa10.79□□□□□ -0.68
U2AF1-207ENST00000468039 G3V3G9 751 aa10.78□□□□□ -0.68
U2AF1-207ENST00000468039 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
U2AF1-207ENST00000468039 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
U2AF1-207ENST00000468039 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
U2AF1-207ENST00000468039 RGL2O15211 777 aa10.73□□□□□ -0.69
U2AF1-207ENST00000468039 ZNF467Q7Z7K2 595 aaPredicted RBP10.73□□□□□ -0.69
U2AF1-207ENST00000468039 RIOK3O14730 519 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms