RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 RASEFQ8IZ41 740 aa9.03□□□□□ -0.96
RIF1-209ENST00000467762 TSPYL2Q9H2G4 693 aaPredicted RBP9.03□□□□□ -0.96
RIF1-209ENST00000467762 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
RIF1-209ENST00000467762 NUBP1P53384 320 aa8.99□□□□□ -0.97
RIF1-209ENST00000467762 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
RIF1-209ENST00000467762 CCDC61Q9Y6R9 512 aa8.98□□□□□ -0.97
RIF1-209ENST00000467762 DCAF1Q9Y4B6 1507 aa8.97□□□□□ -0.97
RIF1-209ENST00000467762 POTEIP0CG38 1075 aa8.97□□□□□ -0.97
RIF1-209ENST00000467762 CLCN6P51797 869 aa8.96□□□□□ -0.98
RIF1-209ENST00000467762 MS4A3Q96HJ5 214 aa8.94□□□□□ -0.98
RIF1-209ENST00000467762 KLHL34Q8N239 644 aa8.9□□□□□ -0.98
RIF1-209ENST00000467762 KIF12Q96FN5 646 aa8.9□□□□□ -0.98
RIF1-209ENST00000467762 DCBLD2Q96PD2 775 aa8.9□□□□□ -0.98
RIF1-209ENST00000467762 IFNLR1Q8IU57 520 aaPredicted RBP8.89□□□□□ -0.99
RIF1-209ENST00000467762 FAM212AQ96EL1 285 aa8.88□□□□□ -0.99
RIF1-209ENST00000467762 MAP3K13O43283 966 aa8.87□□□□□ -0.99
RIF1-209ENST00000467762 SHROOM4Q9ULL8 1493 aa8.86□□□□□ -0.99
RIF1-209ENST00000467762 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
RIF1-209ENST00000467762 DCAF8Q5TAQ9 597 aa8.83□□□□□ -1
RIF1-209ENST00000467762 PYGBP11216 843 aa8.8□□□□□ -1
RIF1-209ENST00000467762 PELP1Q8IZL8 1130 aaKnown RBP8.8□□□□□ -1
RIF1-209ENST00000467762 PCDHB13Q9Y5F0 798 aa8.8□□□□□ -1
RIF1-209ENST00000467762 ATMINO43313 823 aaPredicted RBP8.79□□□□□ -1
RIF1-209ENST00000467762 ASTLQ6HA08 431 aaPredicted RBP8.79□□□□□ -1
RIF1-209ENST00000467762 SPOCK2Q92563 424 aa8.79□□□□□ -1
RIF1-209ENST00000467762 DAXXQ9UER7 740 aaPredicted RBP8.79□□□□□ -1
RIF1-209ENST00000467762 IFNL1Q8IU54 200 aa8.78□□□□□ -1
RIF1-209ENST00000467762 BMP2KQ9NSY1 1161 aaPredicted RBP8.78□□□□□ -1
RIF1-209ENST00000467762 SUPT5HO00267 1087 aaKnown RBP8.76□□□□□ -1.01
RIF1-209ENST00000467762 GSE1Q14687 1217 aa8.76□□□□□ -1.01
RIF1-209ENST00000467762 SGIP1Q9BQI5 828 aa8.76□□□□□ -1.01
RIF1-209ENST00000467762 MYO15BQ96JP2 1530 aa8.75□□□□□ -1.01
RIF1-209ENST00000467762 ATN1P54259 1190 aaPredicted RBP8.75□□□□□ -1.01
RIF1-209ENST00000467762 LHX8Q68G74 356 aa8.75□□□□□ -1.01
RIF1-209ENST00000467762 TIE1P35590 1138 aa8.74□□□□□ -1.01
RIF1-209ENST00000467762 TTLL13PA6NNM8 815 aa8.72□□□□□ -1.01
RIF1-209ENST00000467762 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
RIF1-209ENST00000467762 PCDHB8Q9UN66 801 aa8.71□□□□□ -1.02
RIF1-209ENST00000467762 PRKCSHP14314 528 aaPredicted RBP8.7□□□□□ -1.02
RIF1-209ENST00000467762 BCANQ96GW7 911 aa8.7□□□□□ -1.02
RIF1-209ENST00000467762 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
RIF1-209ENST00000467762 POTEB2H3BUK9 544 aa8.69□□□□□ -1.02
RIF1-209ENST00000467762 SLC39A7Q92504 469 aa8.68□□□□□ -1.02
RIF1-209ENST00000467762 DCAF8L2P0C7V8 631 aa8.67□□□□□ -1.02
RIF1-209ENST00000467762 CHRM1P11229 460 aaPredicted RBP8.67□□□□□ -1.02
RIF1-209ENST00000467762 TMEM106CQ9BVX2 250 aa8.67□□□□□ -1.02
RIF1-209ENST00000467762 TRIM35Q9UPQ4 493 aa8.66□□□□□ -1.02
RIF1-209ENST00000467762 C7P10643 843 aa8.65□□□□□ -1.02
RIF1-209ENST00000467762 POTEFA5A3E0 1075 aa8.64□□□□□ -1.03
RIF1-209ENST00000467762 ZNF467Q7Z7K2 595 aaPredicted RBP8.63□□□□□ -1.03
RIF1-209ENST00000467762 TAOK2Q9UL54 1235 aa8.62□□□□□ -1.03
RIF1-209ENST00000467762 COLQQ9Y215 455 aaPredicted RBP8.61□□□□□ -1.03
RIF1-209ENST00000467762 POTEJP0CG39 1038 aa8.6□□□□□ -1.03
RIF1-209ENST00000467762 PLCB2Q00722 1185 aa8.6□□□□□ -1.03
RIF1-209ENST00000467762 PSEN1P49768 467 aa8.58□□□□□ -1.04
RIF1-209ENST00000467762 OTUD5Q96G74 571 aa8.58□□□□□ -1.04
RIF1-209ENST00000467762 IER5LQ5T953 404 aa8.57□□□□□ -1.04
RIF1-209ENST00000467762 ABCC9O60706 1549 aa8.56□□□□□ -1.04
RIF1-209ENST00000467762 TRIM41Q8WV44 630 aa8.56□□□□□ -1.04
RIF1-209ENST00000467762 RNF25Q96BH1 459 aaPredicted RBP8.56□□□□□ -1.04
RIF1-209ENST00000467762 ARXQ96QS3 562 aa8.56□□□□□ -1.04
RIF1-209ENST00000467762 SEC24BO95487 1268 aa8.55□□□□□ -1.04
RIF1-209ENST00000467762 PDAP1Q13442 181 aaKnown RBP8.55□□□□□ -1.04
RIF1-209ENST00000467762 NACADO15069 1562 aa8.55□□□□□ -1.04
RIF1-209ENST00000467762 HAP1P54257 671 aaPredicted RBP8.53□□□□□ -1.04
RIF1-209ENST00000467762 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
RIF1-209ENST00000467762 PLCG2P16885 1265 aa8.51□□□□□ -1.05
RIF1-209ENST00000467762 RIOK3O14730 519 aaKnown RBP8.49□□□□□ -1.05
RIF1-209ENST00000467762 PKD2Q13563 968 aa8.49□□□□□ -1.05
RIF1-209ENST00000467762 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
RIF1-209ENST00000467762 CABP2Q9NPB3 220 aa8.49□□□□□ -1.05
RIF1-209ENST00000467762 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
RIF1-209ENST00000467762 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
RIF1-209ENST00000467762 MKRN3Q13064 507 aaKnown RBP8.47□□□□□ -1.05
RIF1-209ENST00000467762 ECM2O94769 699 aaPredicted RBP8.46□□□□□ -1.06
RIF1-209ENST00000467762 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.06
RIF1-209ENST00000467762 OCEL1Q9H607 264 aa8.46□□□□□ -1.06
RIF1-209ENST00000467762 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
RIF1-209ENST00000467762 MAMSTRQ6ZN01 415 aa8.45□□□□□ -1.06
RIF1-209ENST00000467762 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
RIF1-209ENST00000467762 SCUBE2Q9NQ36 999 aa8.45□□□□□ -1.06
RIF1-209ENST00000467762 RSF1Q96T23 1441 aaPredicted RBP8.45□□□□□ -1.06
RIF1-209ENST00000467762 RB1CC1Q8TDY2 1594 aa8.44□□□□□ -1.06
RIF1-209ENST00000467762 SCRIBQ14160 1630 aa8.44□□□□□ -1.06
RIF1-209ENST00000467762 VGFO15240 615 aaPredicted RBP8.43□□□□□ -1.06
RIF1-209ENST00000467762 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.06
RIF1-209ENST00000467762 RGL2O15211 777 aa8.42□□□□□ -1.06
RIF1-209ENST00000467762 EFCAB3Q8N7B9 438 aa8.42□□□□□ -1.06
RIF1-209ENST00000467762 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
RIF1-209ENST00000467762 ILDR1Q86SU0 546 aaPredicted RBP8.41□□□□□ -1.06
RIF1-209ENST00000467762 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
RIF1-209ENST00000467762 HRCP23327 699 aa8.4□□□□□ -1.06
RIF1-209ENST00000467762 DPY19L2Q6NUT2 758 aa8.39□□□□□ -1.07
RIF1-209ENST00000467762 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
RIF1-209ENST00000467762 ERICH6Q7L0X2 663 aa8.38□□□□□ -1.07
RIF1-209ENST00000467762 BCL11BQ9C0K0 894 aaPredicted RBP8.36□□□□□ -1.07
RIF1-209ENST00000467762 SLAIN1Q8ND83 568 aa8.35□□□□□ -1.07
RIF1-209ENST00000467762 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
RIF1-209ENST00000467762 STK24Q9Y6E0 443 aa8.34□□□□□ -1.07
RIF1-209ENST00000467762 STK25O00506 426 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms