RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 GSE1Q14687 1217 aa8.55□□□□□ -1.04
MSH2-205ENST00000467323 PABPN1Q86U42 306 aaKnown RBP eCLIP8.54□□□□□ -1.04
MSH2-205ENST00000467323 GTPBP6O43824 516 aaPredicted RBP8.53□□□□□ -1.04
MSH2-205ENST00000467323 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
MSH2-205ENST00000467323 NKX1-1Q15270 411 aaPredicted RBP8.51□□□□□ -1.05
MSH2-205ENST00000467323 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
MSH2-205ENST00000467323 RIOK3O14730 519 aaKnown RBP8.5□□□□□ -1.05
MSH2-205ENST00000467323 ABCB7O75027 752 aa8.5□□□□□ -1.05
MSH2-205ENST00000467323 RNF25Q96BH1 459 aaPredicted RBP8.5□□□□□ -1.05
MSH2-205ENST00000467323 OSCARQ8IYS5 282 aa8.46□□□□□ -1.06
MSH2-205ENST00000467323 STK25O00506 426 aa8.45□□□□□ -1.06
MSH2-205ENST00000467323 VGFO15240 615 aaPredicted RBP8.44□□□□□ -1.06
MSH2-205ENST00000467323 RNF39Q9H2S5 420 aa8.43□□□□□ -1.06
MSH2-205ENST00000467323 C1QBPQ07021 282 aaKnown RBP8.42□□□□□ -1.06
MSH2-205ENST00000467323 LMOD2Q6P5Q4 547 aa8.42□□□□□ -1.06
MSH2-205ENST00000467323 DCAF8Q5TAQ9 597 aa8.4□□□□□ -1.06
MSH2-205ENST00000467323 WDR70Q9NW82 654 aa8.4□□□□□ -1.06
MSH2-205ENST00000467323 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.39□□□□□ -1.07
MSH2-205ENST00000467323 BRPF1P55201 1214 aaPredicted RBP8.37□□□□□ -1.07
MSH2-205ENST00000467323 SGIP1Q9BQI5 828 aa8.37□□□□□ -1.07
MSH2-205ENST00000467323 NUBP1P53384 320 aa8.36□□□□□ -1.07
MSH2-205ENST00000467323 FAM212AQ96EL1 285 aa8.35□□□□□ -1.07
MSH2-205ENST00000467323 STK24Q9Y6E0 443 aa8.35□□□□□ -1.07
MSH2-205ENST00000467323 CHRM1P11229 460 aaPredicted RBP8.33□□□□□ -1.08
MSH2-205ENST00000467323 BCL11BQ9C0K0 894 aaPredicted RBP8.33□□□□□ -1.08
MSH2-205ENST00000467323 KCNV2Q8TDN2 545 aa8.32□□□□□ -1.08
MSH2-205ENST00000467323 SUPT5HO00267 1087 aaKnown RBP8.31□□□□□ -1.08
MSH2-205ENST00000467323 NEUROD2Q15784 382 aa8.31□□□□□ -1.08
MSH2-205ENST00000467323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.3□□□□□ -1.08
MSH2-205ENST00000467323 ZFP91Q96JP5 570 aaPredicted RBP8.3□□□□□ -1.08
MSH2-205ENST00000467323 RANGAP1P46060 587 aaPredicted RBP8.29□□□□□ -1.08
MSH2-205ENST00000467323 DSG3P32926 999 aa8.28□□□□□ -1.08
MSH2-205ENST00000467323 ZC3H15Q8WU90 426 aaKnown RBP8.26□□□□□ -1.09
MSH2-205ENST00000467323 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
MSH2-205ENST00000467323 ARHGEF1Q92888 912 aaKnown RBP8.23□□□□□ -1.09
MSH2-205ENST00000467323 CADPS2Q86UW7 1296 aa8.21□□□□□ -1.1
MSH2-205ENST00000467323 SLC24A3Q9HC58 644 aa8.21□□□□□ -1.1
MSH2-205ENST00000467323 TESPA1A2RU30 521 aaPredicted RBP8.16□□□□□ -1.1
MSH2-205ENST00000467323 PYGBP11216 843 aa8.16□□□□□ -1.1
MSH2-205ENST00000467323 E2F4Q16254 413 aa8.15□□□□□ -1.1
MSH2-205ENST00000467323 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.1
MSH2-205ENST00000467323 RASEFQ8IZ41 740 aa8.15□□□□□ -1.1
MSH2-205ENST00000467323 SPDYE1Q8NFV5 336 aaPredicted RBP8.14□□□□□ -1.11
MSH2-205ENST00000467323 ZMYND10O75800 440 aa8.13□□□□□ -1.11
MSH2-205ENST00000467323 CREBZFQ9NS37 354 aa8.13□□□□□ -1.11
MSH2-205ENST00000467323 SEMA3EO15041 775 aa8.12□□□□□ -1.11
MSH2-205ENST00000467323 UBTFP17480 764 aaKnown RBP8.12□□□□□ -1.11
MSH2-205ENST00000467323 MNX1P50219 401 aaPredicted RBP8.12□□□□□ -1.11
MSH2-205ENST00000467323 ZNF467Q7Z7K2 595 aaPredicted RBP8.12□□□□□ -1.11
MSH2-205ENST00000467323 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
MSH2-205ENST00000467323 RSPH6AQ9H0K4 717 aa8.11□□□□□ -1.11
MSH2-205ENST00000467323 PRR29P0C7W0 189 aa8.1□□□□□ -1.11
MSH2-205ENST00000467323 PDAP1Q13442 181 aaKnown RBP8.08□□□□□ -1.12
MSH2-205ENST00000467323 BARGINQ6ZT62 677 aa8.07□□□□□ -1.12
MSH2-205ENST00000467323 AK7Q96M32 723 aa8.06□□□□□ -1.12
MSH2-205ENST00000467323 TRIM26Q12899 539 aaPredicted RBP8.05□□□□□ -1.12
MSH2-205ENST00000467323 MFRPQ9BY79 579 aa8.05□□□□□ -1.12
MSH2-205ENST00000467323 CLEC11AQ9Y240 323 aa8.04□□□□□ -1.12
MSH2-205ENST00000467323 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
MSH2-205ENST00000467323 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
MSH2-205ENST00000467323 KRI1Q8N9T8 703 aaKnown RBP8□□□□□ -1.13
MSH2-205ENST00000467323 NLRP6P59044 892 aa7.99□□□□□ -1.13
MSH2-205ENST00000467323 GPBP1L1Q9HC44 474 aaPredicted RBP7.99□□□□□ -1.13
MSH2-205ENST00000467323 ARIH1Q9Y4X5 557 aaPredicted RBP7.99□□□□□ -1.13
MSH2-205ENST00000467323 AKT1S1Q96B36 256 aa7.98□□□□□ -1.13
MSH2-205ENST00000467323 KDM4CQ9H3R0 1056 aa7.98□□□□□ -1.13
MSH2-205ENST00000467323 PPP1R37O75864 691 aa7.97□□□□□ -1.13
MSH2-205ENST00000467323 PDE4AP27815 886 aa7.97□□□□□ -1.13
MSH2-205ENST00000467323 PSEN1P49768 467 aa7.97□□□□□ -1.13
MSH2-205ENST00000467323 GPIHBP1Q8IV16 184 aa7.97□□□□□ -1.13
MSH2-205ENST00000467323 ARID3AQ99856 593 aa7.96□□□□□ -1.14
MSH2-205ENST00000467323 SOX12O15370 315 aa7.95□□□□□ -1.14
MSH2-205ENST00000467323 HRCP23327 699 aa7.95□□□□□ -1.14
MSH2-205ENST00000467323 LARP6Q9BRS8 491 aaKnown RBP7.95□□□□□ -1.14
MSH2-205ENST00000467323 RBM42Q9BTD8 480 aaKnown RBP7.95□□□□□ -1.14
MSH2-205ENST00000467323 ZNF579Q8NAF0 562 aaKnown RBP7.94□□□□□ -1.14
MSH2-205ENST00000467323 PCDHB8Q9UN66 801 aa7.94□□□□□ -1.14
MSH2-205ENST00000467323 PCDHB13Q9Y5F0 798 aa7.94□□□□□ -1.14
MSH2-205ENST00000467323 MFSD10Q14728 455 aa7.93□□□□□ -1.14
MSH2-205ENST00000467323 FBXO22Q8NEZ5 403 aa7.93□□□□□ -1.14
MSH2-205ENST00000467323 PDE4DQ08499 809 aa7.92□□□□□ -1.14
MSH2-205ENST00000467323 TSPYL2Q9H2G4 693 aaPredicted RBP7.92□□□□□ -1.14
MSH2-205ENST00000467323 NCKAP5LQ9HCH0 1330 aa7.92□□□□□ -1.14
MSH2-205ENST00000467323 ZBTB7CA1YPR0 619 aa7.91□□□□□ -1.14
MSH2-205ENST00000467323 TRIM66O15016 1216 aa7.91□□□□□ -1.14
MSH2-205ENST00000467323 FLIIQ13045 1269 aa7.91□□□□□ -1.14
MSH2-205ENST00000467323 DDX27Q96GQ7 796 aaKnown RBP7.91□□□□□ -1.14
MSH2-205ENST00000467323 RBM26Q5T8P6 1007 aaKnown RBP7.9□□□□□ -1.14
MSH2-205ENST00000467323 PDIA4P13667 645 aaKnown RBP7.89□□□□□ -1.15
MSH2-205ENST00000467323 EFCAB3Q8N7B9 438 aa7.89□□□□□ -1.15
MSH2-205ENST00000467323 APBB1O00213 710 aa7.88□□□□□ -1.15
MSH2-205ENST00000467323 MKRN3Q13064 507 aaKnown RBP7.88□□□□□ -1.15
MSH2-205ENST00000467323 CAMK2BQ13554 666 aa7.88□□□□□ -1.15
MSH2-205ENST00000467323 C1orf115Q9H7X2 142 aa7.88□□□□□ -1.15
MSH2-205ENST00000467323 PHF8Q9UPP1 1060 aa7.88□□□□□ -1.15
MSH2-205ENST00000467323 CCDC9Q9Y3X0 531 aaKnown RBP7.88□□□□□ -1.15
MSH2-205ENST00000467323 REM2Q8IYK8 340 aaPredicted RBP7.87□□□□□ -1.15
MSH2-205ENST00000467323 CRISPLD2Q9H0B8 497 aa7.87□□□□□ -1.15
MSH2-205ENST00000467323 CABP2Q9NPB3 220 aa7.87□□□□□ -1.15
MSH2-205ENST00000467323 ZNF316A6NFI3 1004 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms