RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
MSL3-209ENST00000467141 ATMINO43313 823 aaPredicted RBP11.02□□□□□ -0.65
MSL3-209ENST00000467141 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
MSL3-209ENST00000467141 CREBZFQ9NS37 354 aa10.93□□□□□ -0.66
MSL3-209ENST00000467141 MS4A3Q96HJ5 214 aa10.92□□□□□ -0.66
MSL3-209ENST00000467141 ST18O60284 1047 aa10.89□□□□□ -0.67
MSL3-209ENST00000467141 ATN1P54259 1190 aaPredicted RBP10.86□□□□□ -0.67
MSL3-209ENST00000467141 POTEFA5A3E0 1075 aa10.85□□□□□ -0.67
MSL3-209ENST00000467141 SLC4A1APQ9BWU0 796 aaKnown RBP10.79□□□□□ -0.68
MSL3-209ENST00000467141 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
MSL3-209ENST00000467141 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
MSL3-209ENST00000467141 SEC24BO95487 1268 aa10.72□□□□□ -0.69
MSL3-209ENST00000467141 COLQQ9Y215 455 aaPredicted RBP10.68□□□□□ -0.7
MSL3-209ENST00000467141 ZBTB22O15209 634 aa10.67□□□□□ -0.7
MSL3-209ENST00000467141 STAG3Q9UJ98 1225 aa10.66□□□□□ -0.7
MSL3-209ENST00000467141 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
MSL3-209ENST00000467141 MARVELD3Q96A59 401 aa10.63□□□□□ -0.71
MSL3-209ENST00000467141 TMEM121BQ9BXQ6 578 aaPredicted RBP10.62□□□□□ -0.71
MSL3-209ENST00000467141 TRPC6Q9Y210 931 aa10.58□□□□□ -0.72
MSL3-209ENST00000467141 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
MSL3-209ENST00000467141 MNX1P50219 401 aaPredicted RBP10.56□□□□□ -0.72
MSL3-209ENST00000467141 TIE1P35590 1138 aa10.52□□□□□ -0.73
MSL3-209ENST00000467141 KIF12Q96FN5 646 aa10.5□□□□□ -0.73
MSL3-209ENST00000467141 KRTAP3-3Q9BYR6 98 aa10.49□□□□□ -0.73
MSL3-209ENST00000467141 KRTAP3-2Q9BYR7 98 aa10.49□□□□□ -0.73
MSL3-209ENST00000467141 SNPHO15079 494 aa10.48□□□□□ -0.73
MSL3-209ENST00000467141 CCDC61Q9Y6R9 512 aa10.47□□□□□ -0.73
MSL3-209ENST00000467141 TTLL13PA6NNM8 815 aa10.46□□□□□ -0.73
MSL3-209ENST00000467141 EMP3P54852 163 aa10.43□□□□□ -0.74
MSL3-209ENST00000467141 IER5LQ5T953 404 aa10.42□□□□□ -0.74
MSL3-209ENST00000467141 TRIM35Q9UPQ4 493 aa10.42□□□□□ -0.74
MSL3-209ENST00000467141 MAP3K13O43283 966 aa10.41□□□□□ -0.74
MSL3-209ENST00000467141 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
MSL3-209ENST00000467141 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
MSL3-209ENST00000467141 FAM205CA6NFA0 338 aa10.37□□□□□ -0.75
MSL3-209ENST00000467141 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
MSL3-209ENST00000467141 PLCG2P16885 1265 aa10.34□□□□□ -0.75
MSL3-209ENST00000467141 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
MSL3-209ENST00000467141 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
MSL3-209ENST00000467141 IRX5P78411 483 aaPredicted RBP10.18□□□□□ -0.78
MSL3-209ENST00000467141 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
MSL3-209ENST00000467141 PCDHB13Q9Y5F0 798 aa10.15□□□□□ -0.78
MSL3-209ENST00000467141 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
MSL3-209ENST00000467141 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
MSL3-209ENST00000467141 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
MSL3-209ENST00000467141 SGIP1Q9BQI5 828 aa10.09□□□□□ -0.79
MSL3-209ENST00000467141 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
MSL3-209ENST00000467141 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
MSL3-209ENST00000467141 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
MSL3-209ENST00000467141 ERBB3P21860 1342 aa10.01□□□□□ -0.81
MSL3-209ENST00000467141 PLA2G2EQ9NZK7 142 aa9.95□□□□□ -0.82
MSL3-209ENST00000467141 PLEKHG5O94827 1062 aa9.9□□□□□ -0.82
MSL3-209ENST00000467141 HOXB1P14653 301 aaPredicted RBP9.89□□□□□ -0.83
MSL3-209ENST00000467141 PTGER2P43116 358 aa9.89□□□□□ -0.83
MSL3-209ENST00000467141 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
MSL3-209ENST00000467141 L3MBTL3Q96JM7 780 aaPredicted RBP9.89□□□□□ -0.83
MSL3-209ENST00000467141 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
MSL3-209ENST00000467141 MIER1Q8N108 512 aa9.85□□□□□ -0.83
MSL3-209ENST00000467141 HOXB3P14651 431 aaPredicted RBP9.84□□□□□ -0.83
MSL3-209ENST00000467141 PDCD7Q8N8D1 485 aaKnown RBP9.84□□□□□ -0.83
MSL3-209ENST00000467141 ANKRD13DQ6ZTN6 518 aa9.82□□□□□ -0.84
MSL3-209ENST00000467141 ZNF687Q8N1G0 1237 aa9.8□□□□□ -0.84
MSL3-209ENST00000467141 DOK7Q18PE1 504 aa9.74□□□□□ -0.85
MSL3-209ENST00000467141 IRX2Q9BZI1 471 aaPredicted RBP9.72□□□□□ -0.85
MSL3-209ENST00000467141 MKRN3Q13064 507 aaKnown RBP9.71□□□□□ -0.86
MSL3-209ENST00000467141 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
MSL3-209ENST00000467141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.69□□□□□ -0.86
MSL3-209ENST00000467141 HCSTQ9UBK5 93 aa9.69□□□□□ -0.86
MSL3-209ENST00000467141 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
MSL3-209ENST00000467141 NUBP1P53384 320 aa9.67□□□□□ -0.86
MSL3-209ENST00000467141 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
MSL3-209ENST00000467141 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
MSL3-209ENST00000467141 G3V3G9 751 aa9.63□□□□□ -0.87
MSL3-209ENST00000467141 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
MSL3-209ENST00000467141 PYGBP11216 843 aa9.61□□□□□ -0.87
MSL3-209ENST00000467141 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
MSL3-209ENST00000467141 DPY19L2Q6NUT2 758 aa9.6□□□□□ -0.87
MSL3-209ENST00000467141 EHMT2Q96KQ7 1210 aa9.6□□□□□ -0.87
MSL3-209ENST00000467141 LSM11P83369 360 aaKnown RBP eCLIP9.59□□□□□ -0.87
MSL3-209ENST00000467141 CSRNP3Q8WYN3 585 aa9.56□□□□□ -0.88
MSL3-209ENST00000467141 BOLA1Q9Y3E2 137 aa9.56□□□□□ -0.88
MSL3-209ENST00000467141 ZBTB47Q9UFB7 747 aaPredicted RBP9.55□□□□□ -0.88
MSL3-209ENST00000467141 NISCHQ9Y2I1 1504 aa9.55□□□□□ -0.88
MSL3-209ENST00000467141 PROM2Q8N271 834 aa9.54□□□□□ -0.88
MSL3-209ENST00000467141 ZSWIM6Q9HCJ5 1215 aa9.52□□□□□ -0.89
MSL3-209ENST00000467141 RGS20O76081 388 aa9.5□□□□□ -0.89
MSL3-209ENST00000467141 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
MSL3-209ENST00000467141 Q6ZNB5 142 aa9.47□□□□□ -0.89
MSL3-209ENST00000467141 ILDR1Q86SU0 546 aaPredicted RBP9.44□□□□□ -0.9
MSL3-209ENST00000467141 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
MSL3-209ENST00000467141 ARSIQ5FYB1 569 aa9.42□□□□□ -0.9
MSL3-209ENST00000467141 AXIN2Q9Y2T1 843 aa9.39□□□□□ -0.91
MSL3-209ENST00000467141 ZNF467Q7Z7K2 595 aaPredicted RBP9.38□□□□□ -0.91
MSL3-209ENST00000467141 PSEN1P49768 467 aa9.36□□□□□ -0.91
MSL3-209ENST00000467141 PBX2P40425 430 aa9.35□□□□□ -0.91
MSL3-209ENST00000467141 KHSRPQ92945 711 aaKnown RBP eCLIP9.35□□□□□ -0.911e-6■■□□□ 12
MSL3-209ENST00000467141 POTEEQ6S8J3 1075 aa9.32□□□□□ -0.92
MSL3-209ENST00000467141 ADGRD1Q6QNK2 874 aa9.31□□□□□ -0.92
MSL3-209ENST00000467141 KCTD12Q96CX2 325 aaKnown RBP9.31□□□□□ -0.92
MSL3-209ENST00000467141 TMEM92Q6UXU6 159 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms