RNA–Protein interactions for RNA: ENST00000465650.1

KCTD3-204, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 2

Gene KCTD3, Length 652 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-204ENST00000465650 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
KCTD3-204ENST00000465650 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
KCTD3-204ENST00000465650 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
KCTD3-204ENST00000465650 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
KCTD3-204ENST00000465650 C7P10643 843 aa13.04□□□□□ -0.32
KCTD3-204ENST00000465650 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
KCTD3-204ENST00000465650 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
KCTD3-204ENST00000465650 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
KCTD3-204ENST00000465650 POTEFA5A3E0 1075 aa12.96□□□□□ -0.33
KCTD3-204ENST00000465650 ATN1P54259 1190 aaPredicted RBP12.94□□□□□ -0.34
KCTD3-204ENST00000465650 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
KCTD3-204ENST00000465650 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
KCTD3-204ENST00000465650 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
KCTD3-204ENST00000465650 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
KCTD3-204ENST00000465650 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
KCTD3-204ENST00000465650 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
KCTD3-204ENST00000465650 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
KCTD3-204ENST00000465650 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.37
KCTD3-204ENST00000465650 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
KCTD3-204ENST00000465650 MAP3K13O43283 966 aa12.68□□□□□ -0.38
KCTD3-204ENST00000465650 TIE1P35590 1138 aa12.67□□□□□ -0.38
KCTD3-204ENST00000465650 PROM2Q8N271 834 aa12.65□□□□□ -0.38
KCTD3-204ENST00000465650 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
KCTD3-204ENST00000465650 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
KCTD3-204ENST00000465650 ST18O60284 1047 aa12.61□□□□□ -0.39
KCTD3-204ENST00000465650 SEC24BO95487 1268 aa12.58□□□□□ -0.4
KCTD3-204ENST00000465650 MMRN1Q13201 1228 aa12.54□□□□□ -0.4
KCTD3-204ENST00000465650 MIER1Q8N108 512 aa12.54□□□□□ -0.4
KCTD3-204ENST00000465650 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
KCTD3-204ENST00000465650 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
KCTD3-204ENST00000465650 IER5LQ5T953 404 aa12.51□□□□□ -0.41
KCTD3-204ENST00000465650 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
KCTD3-204ENST00000465650 PLEKHG5O94827 1062 aa12.47□□□□□ -0.41
KCTD3-204ENST00000465650 PCDHB13Q9Y5F0 798 aa12.45□□□□□ -0.42
KCTD3-204ENST00000465650 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
KCTD3-204ENST00000465650 IFNL1Q8IU54 200 aa12.39□□□□□ -0.43
KCTD3-204ENST00000465650 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
KCTD3-204ENST00000465650 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
KCTD3-204ENST00000465650 NUBP1P53384 320 aa12.35□□□□□ -0.43
KCTD3-204ENST00000465650 TMEM106CQ9BVX2 250 aa12.35□□□□□ -0.43
KCTD3-204ENST00000465650 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
KCTD3-204ENST00000465650 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
KCTD3-204ENST00000465650 PLCG2P16885 1265 aa12.33□□□□□ -0.44
KCTD3-204ENST00000465650 POTEB3A0JP26 581 aa12.23□□□□□ -0.45
KCTD3-204ENST00000465650 POTEBQ6S5H4 581 aa12.23□□□□□ -0.45
KCTD3-204ENST00000465650 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
KCTD3-204ENST00000465650 KRTAP3-3Q9BYR6 98 aa12.22□□□□□ -0.45
KCTD3-204ENST00000465650 KRTAP3-2Q9BYR7 98 aa12.22□□□□□ -0.45
KCTD3-204ENST00000465650 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
KCTD3-204ENST00000465650 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
KCTD3-204ENST00000465650 SNPHO15079 494 aa12.19□□□□□ -0.46
KCTD3-204ENST00000465650 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.18□□□□□ -0.46
KCTD3-204ENST00000465650 PYGBP11216 843 aa12.16□□□□□ -0.46
KCTD3-204ENST00000465650 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
KCTD3-204ENST00000465650 EMP3P54852 163 aa12.12□□□□□ -0.47
KCTD3-204ENST00000465650 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
KCTD3-204ENST00000465650 DCAF8Q5TAQ9 597 aa12.1□□□□□ -0.47
KCTD3-204ENST00000465650 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
KCTD3-204ENST00000465650 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
KCTD3-204ENST00000465650 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
KCTD3-204ENST00000465650 FKBP8Q14318 412 aa11.97□□□□□ -0.49
KCTD3-204ENST00000465650 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
KCTD3-204ENST00000465650 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
KCTD3-204ENST00000465650 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
KCTD3-204ENST00000465650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
KCTD3-204ENST00000465650 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
KCTD3-204ENST00000465650 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
KCTD3-204ENST00000465650 ZNF467Q7Z7K2 595 aaPredicted RBP11.87□□□□□ -0.51
KCTD3-204ENST00000465650 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
KCTD3-204ENST00000465650 PSEN1P49768 467 aa11.85□□□□□ -0.51
KCTD3-204ENST00000465650 RNF166Q96A37 237 aaPredicted RBP11.82□□□□□ -0.52
KCTD3-204ENST00000465650 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
KCTD3-204ENST00000465650 GSE1Q14687 1217 aa11.8□□□□□ -0.52
KCTD3-204ENST00000465650 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
KCTD3-204ENST00000465650 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
KCTD3-204ENST00000465650 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
KCTD3-204ENST00000465650 ERBB3P21860 1342 aa11.73□□□□□ -0.53
KCTD3-204ENST00000465650 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
KCTD3-204ENST00000465650 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
KCTD3-204ENST00000465650 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
KCTD3-204ENST00000465650 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.53
KCTD3-204ENST00000465650 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.53
KCTD3-204ENST00000465650 VARS2Q5ST30 1063 aaKnown RBP11.69□□□□□ -0.54
KCTD3-204ENST00000465650 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
KCTD3-204ENST00000465650 G3V3G9 751 aa11.68□□□□□ -0.54
KCTD3-204ENST00000465650 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
KCTD3-204ENST00000465650 ZNF687Q8N1G0 1237 aa11.61□□□□□ -0.55
KCTD3-204ENST00000465650 TMEM92Q6UXU6 159 aa11.58□□□□□ -0.56
KCTD3-204ENST00000465650 CIZ1Q9ULV3 898 aaPredicted RBP11.58□□□□□ -0.56
KCTD3-204ENST00000465650 GPR153Q6NV75 609 aa11.54□□□□□ -0.56
KCTD3-204ENST00000465650 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
KCTD3-204ENST00000465650 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
KCTD3-204ENST00000465650 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
KCTD3-204ENST00000465650 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
KCTD3-204ENST00000465650 PTGER2P43116 358 aa11.49□□□□□ -0.57
KCTD3-204ENST00000465650 ZSWIM6Q9HCJ5 1215 aa11.49□□□□□ -0.57
KCTD3-204ENST00000465650 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
KCTD3-204ENST00000465650 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
KCTD3-204ENST00000465650 ARSIQ5FYB1 569 aa11.42□□□□□ -0.58
KCTD3-204ENST00000465650 KHSRPQ92945 711 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms