RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 ATMINO43313 823 aaPredicted RBP14.71□□□□□ -0.05
KPNA1-202ENST00000464940 SLC39A7Q92504 469 aa14.7□□□□□ -0.06
KPNA1-202ENST00000464940 METRNQ9UJH8 293 aa14.7□□□□□ -0.06
KPNA1-202ENST00000464940 PLSCR2Q9NRY7 297 aa14.69□□□□□ -0.06
KPNA1-202ENST00000464940 C7P10643 843 aa14.68□□□□□ -0.06
KPNA1-202ENST00000464940 CCDC61Q9Y6R9 512 aa14.67□□□□□ -0.06
KPNA1-202ENST00000464940 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
KPNA1-202ENST00000464940 KIF12Q96FN5 646 aa14.6□□□□□ -0.07
KPNA1-202ENST00000464940 POTEMA6NI47 508 aa14.58□□□□□ -0.08
KPNA1-202ENST00000464940 ATN1P54259 1190 aaPredicted RBP14.57□□□□□ -0.08
KPNA1-202ENST00000464940 MIER1Q8N108 512 aa14.57□□□□□ -0.08
KPNA1-202ENST00000464940 POTEJP0CG39 1038 aa14.56□□□□□ -0.08
KPNA1-202ENST00000464940 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
KPNA1-202ENST00000464940 POTEGQ6S5H5 508 aa14.53□□□□□ -0.08
KPNA1-202ENST00000464940 BMP2KQ9NSY1 1161 aaPredicted RBP14.51□□□□□ -0.09
KPNA1-202ENST00000464940 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
KPNA1-202ENST00000464940 MAP3K13O43283 966 aa14.49□□□□□ -0.09
KPNA1-202ENST00000464940 TIE1P35590 1138 aa14.47□□□□□ -0.09
KPNA1-202ENST00000464940 SCUBE2Q9NQ36 999 aa14.47□□□□□ -0.09
KPNA1-202ENST00000464940 TRPC6Q9Y210 931 aa14.47□□□□□ -0.09
KPNA1-202ENST00000464940 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
KPNA1-202ENST00000464940 POTEFA5A3E0 1075 aa14.42□□□□□ -0.1
KPNA1-202ENST00000464940 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
KPNA1-202ENST00000464940 PCDH10Q9P2E7 1040 aa14.39□□□□□ -0.11
KPNA1-202ENST00000464940 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
KPNA1-202ENST00000464940 SGIP1Q9BQI5 828 aa14.37□□□□□ -0.11
KPNA1-202ENST00000464940 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
KPNA1-202ENST00000464940 FAM163AQ96GL9 167 aaPredicted RBP14.34□□□□□ -0.11
KPNA1-202ENST00000464940 SEC24BO95487 1268 aa14.32□□□□□ -0.12
KPNA1-202ENST00000464940 AMER1Q5JTC6 1135 aaPredicted RBP14.32□□□□□ -0.12
KPNA1-202ENST00000464940 LCE2DQ5TA82 110 aaPredicted RBP14.32□□□□□ -0.12
KPNA1-202ENST00000464940 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
KPNA1-202ENST00000464940 NUBP1P53384 320 aa14.31□□□□□ -0.12
KPNA1-202ENST00000464940 COLQQ9Y215 455 aaPredicted RBP14.3□□□□□ -0.12
KPNA1-202ENST00000464940 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
KPNA1-202ENST00000464940 IER5LQ5T953 404 aa14.28□□□□□ -0.12
KPNA1-202ENST00000464940 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
KPNA1-202ENST00000464940 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
KPNA1-202ENST00000464940 FAM212AQ96EL1 285 aa14.23□□□□□ -0.13
KPNA1-202ENST00000464940 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
KPNA1-202ENST00000464940 TMEM106CQ9BVX2 250 aa14.16□□□□□ -0.14
KPNA1-202ENST00000464940 PLCG2P16885 1265 aa14.1□□□□□ -0.15
KPNA1-202ENST00000464940 SLAIN1Q8ND83 568 aa14.09□□□□□ -0.15
KPNA1-202ENST00000464940 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
KPNA1-202ENST00000464940 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
KPNA1-202ENST00000464940 IRX5P78411 483 aaPredicted RBP14.05□□□□□ -0.16
KPNA1-202ENST00000464940 PYGBP11216 843 aa14.03□□□□□ -0.16
KPNA1-202ENST00000464940 CDAN1Q8IWY9 1227 aa14.01□□□□□ -0.17
KPNA1-202ENST00000464940 OCEL1Q9H607 264 aa14□□□□□ -0.17
KPNA1-202ENST00000464940 ST18O60284 1047 aa13.98□□□□□ -0.17
KPNA1-202ENST00000464940 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
KPNA1-202ENST00000464940 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
KPNA1-202ENST00000464940 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.89□□□□□ -0.19
KPNA1-202ENST00000464940 GSE1Q14687 1217 aa13.87□□□□□ -0.19
KPNA1-202ENST00000464940 SNPHO15079 494 aa13.86□□□□□ -0.19
KPNA1-202ENST00000464940 TMEM121BQ9BXQ6 578 aaPredicted RBP13.86□□□□□ -0.19
KPNA1-202ENST00000464940 ZNF467Q7Z7K2 595 aaPredicted RBP13.85□□□□□ -0.19
KPNA1-202ENST00000464940 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
KPNA1-202ENST00000464940 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
KPNA1-202ENST00000464940 PDCD7Q8N8D1 485 aaKnown RBP13.8□□□□□ -0.2
KPNA1-202ENST00000464940 MKRN3Q13064 507 aaKnown RBP13.79□□□□□ -0.2
KPNA1-202ENST00000464940 CHRM1P11229 460 aaPredicted RBP13.78□□□□□ -0.2
KPNA1-202ENST00000464940 C3orf67Q6ZVT6 689 aa13.75□□□□□ -0.21
KPNA1-202ENST00000464940 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
KPNA1-202ENST00000464940 PSEN1P49768 467 aa13.72□□□□□ -0.21
KPNA1-202ENST00000464940 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
KPNA1-202ENST00000464940 MARVELD3Q96A59 401 aa13.72□□□□□ -0.21
KPNA1-202ENST00000464940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■□□□ 11.8
KPNA1-202ENST00000464940 SPNS2Q8IVW8 549 aa13.67□□□□□ -0.22
KPNA1-202ENST00000464940 MMRN1Q13201 1228 aa13.66□□□□□ -0.22
KPNA1-202ENST00000464940 PDAP1Q13442 181 aaKnown RBP13.64□□□□□ -0.23
KPNA1-202ENST00000464940 ILDR1Q86SU0 546 aaPredicted RBP13.63□□□□□ -0.23
KPNA1-202ENST00000464940 EMP3P54852 163 aa13.61□□□□□ -0.23
KPNA1-202ENST00000464940 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
KPNA1-202ENST00000464940 DPY19L2Q6NUT2 758 aa13.55□□□□□ -0.24
KPNA1-202ENST00000464940 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
KPNA1-202ENST00000464940 G3V3G9 751 aa13.53□□□□□ -0.24
KPNA1-202ENST00000464940 HS3ST6Q96QI5 342 aa13.53□□□□□ -0.24
KPNA1-202ENST00000464940 BOLA1Q9Y3E2 137 aa13.52□□□□□ -0.25
KPNA1-202ENST00000464940 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
KPNA1-202ENST00000464940 POTEB3A0JP26 581 aa13.49□□□□□ -0.25
KPNA1-202ENST00000464940 POTEBQ6S5H4 581 aa13.49□□□□□ -0.25
KPNA1-202ENST00000464940 KRTAP3-3Q9BYR6 98 aa13.47□□□□□ -0.25
KPNA1-202ENST00000464940 KRTAP3-2Q9BYR7 98 aa13.47□□□□□ -0.25
KPNA1-202ENST00000464940 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
KPNA1-202ENST00000464940 PKD2Q13563 968 aa13.43□□□□□ -0.26
KPNA1-202ENST00000464940 ZNF710Q8N1W2 664 aa13.39□□□□□ -0.27
KPNA1-202ENST00000464940 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
KPNA1-202ENST00000464940 HOXB1P14653 301 aaPredicted RBP13.38□□□□□ -0.27
KPNA1-202ENST00000464940 DOK7Q18PE1 504 aa13.37□□□□□ -0.27
KPNA1-202ENST00000464940 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
KPNA1-202ENST00000464940 ECM2O94769 699 aaPredicted RBP13.32□□□□□ -0.28
KPNA1-202ENST00000464940 ERBB3P21860 1342 aa13.31□□□□□ -0.28
KPNA1-202ENST00000464940 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
KPNA1-202ENST00000464940 MICALL2Q8IY33 904 aa13.25□□□□□ -0.29
KPNA1-202ENST00000464940 SOX12O15370 315 aa13.23□□□□□ -0.29
KPNA1-202ENST00000464940 TMEM92Q6UXU6 159 aa13.22□□□□□ -0.29
KPNA1-202ENST00000464940 ZSWIM6Q9HCJ5 1215 aa13.22□□□□□ -0.29
KPNA1-202ENST00000464940 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
KPNA1-202ENST00000464940 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms