RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 MAMSTRQ6ZN01 415 aa6.61□□□□□ -1.35
TMEM56-204ENST00000463375 SLC39A7Q92504 469 aa6.61□□□□□ -1.35
TMEM56-204ENST00000463375 ATMINO43313 823 aaPredicted RBP6.6□□□□□ -1.35
TMEM56-204ENST00000463375 NPM1P06748 294 aaKnown RBP eCLIP6.59□□□□□ -1.35
TMEM56-204ENST00000463375 MS4A3Q96HJ5 214 aa6.58□□□□□ -1.36
TMEM56-204ENST00000463375 SCUBE2Q9NQ36 999 aa6.54□□□□□ -1.36
TMEM56-204ENST00000463375 SPDYE4A6NLX3 237 aa6.52□□□□□ -1.37
TMEM56-204ENST00000463375 ATN1P54259 1190 aaPredicted RBP6.5□□□□□ -1.37
TMEM56-204ENST00000463375 FAM163AQ96GL9 167 aaPredicted RBP6.49□□□□□ -1.37
TMEM56-204ENST00000463375 POTEFA5A3E0 1075 aa6.48□□□□□ -1.37
TMEM56-204ENST00000463375 CCDC61Q9Y6R9 512 aa6.48□□□□□ -1.37
TMEM56-204ENST00000463375 BMP2KQ9NSY1 1161 aaPredicted RBP6.46□□□□□ -1.38
TMEM56-204ENST00000463375 KIF12Q96FN5 646 aa6.45□□□□□ -1.38
TMEM56-204ENST00000463375 TIE1P35590 1138 aa6.43□□□□□ -1.38
TMEM56-204ENST00000463375 CDAN1Q8IWY9 1227 aa6.42□□□□□ -1.38
TMEM56-204ENST00000463375 CSRNP3Q8WYN3 585 aa6.42□□□□□ -1.38
TMEM56-204ENST00000463375 TSPYL2Q9H2G4 693 aaPredicted RBP6.42□□□□□ -1.38
TMEM56-204ENST00000463375 TRPC6Q9Y210 931 aa6.41□□□□□ -1.38
TMEM56-204ENST00000463375 PROM2Q8N271 834 aa6.39□□□□□ -1.39
TMEM56-204ENST00000463375 COLQQ9Y215 455 aaPredicted RBP6.39□□□□□ -1.39
TMEM56-204ENST00000463375 IER5LQ5T953 404 aa6.38□□□□□ -1.39
TMEM56-204ENST00000463375 TTLL13PA6NNM8 815 aa6.37□□□□□ -1.39
TMEM56-204ENST00000463375 MAP3K13O43283 966 aa6.37□□□□□ -1.39
TMEM56-204ENST00000463375 SEC24BO95487 1268 aa6.35□□□□□ -1.39
TMEM56-204ENST00000463375 ST18O60284 1047 aa6.34□□□□□ -1.39
TMEM56-204ENST00000463375 SGIP1Q9BQI5 828 aa6.33□□□□□ -1.4
TMEM56-204ENST00000463375 RASEFQ8IZ41 740 aa6.32□□□□□ -1.4
TMEM56-204ENST00000463375 TRIM35Q9UPQ4 493 aa6.32□□□□□ -1.4
TMEM56-204ENST00000463375 MMRN1Q13201 1228 aa6.31□□□□□ -1.4
TMEM56-204ENST00000463375 SLAIN1Q8ND83 568 aa6.31□□□□□ -1.4
TMEM56-204ENST00000463375 TMEM121BQ9BXQ6 578 aaPredicted RBP6.3□□□□□ -1.4
TMEM56-204ENST00000463375 SPNS2Q8IVW8 549 aa6.29□□□□□ -1.4
TMEM56-204ENST00000463375 PLEKHG5O94827 1062 aa6.27□□□□□ -1.41
TMEM56-204ENST00000463375 PCDHB13Q9Y5F0 798 aa6.26□□□□□ -1.41
TMEM56-204ENST00000463375 PLCG2P16885 1265 aa6.24□□□□□ -1.41
TMEM56-204ENST00000463375 IRX5P78411 483 aaPredicted RBP6.24□□□□□ -1.41
TMEM56-204ENST00000463375 IFNL1Q8IU54 200 aa6.23□□□□□ -1.41
TMEM56-204ENST00000463375 MIER1Q8N108 512 aa6.22□□□□□ -1.41
TMEM56-204ENST00000463375 TMEM106CQ9BVX2 250 aa6.22□□□□□ -1.41
TMEM56-204ENST00000463375 SNPHO15079 494 aa6.21□□□□□ -1.42
TMEM56-204ENST00000463375 NUBP1P53384 320 aa6.19□□□□□ -1.42
TMEM56-204ENST00000463375 OCEL1Q9H607 264 aa6.18□□□□□ -1.42
TMEM56-204ENST00000463375 MARVELD3Q96A59 401 aa6.17□□□□□ -1.42
TMEM56-204ENST00000463375 ZBTB47Q9UFB7 747 aaPredicted RBP6.17□□□□□ -1.42
TMEM56-204ENST00000463375 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.16□□□□□ -1.42
TMEM56-204ENST00000463375 FAM212AQ96EL1 285 aa6.15□□□□□ -1.42
TMEM56-204ENST00000463375 PLCD3Q8N3E9 789 aa6.14□□□□□ -1.43
TMEM56-204ENST00000463375 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
TMEM56-204ENST00000463375 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
TMEM56-204ENST00000463375 EMP3P54852 163 aa6.12□□□□□ -1.43
TMEM56-204ENST00000463375 EHMT2Q96KQ7 1210 aa6.12□□□□□ -1.43
TMEM56-204ENST00000463375 PDCD7Q8N8D1 485 aaKnown RBP6.1□□□□□ -1.43
TMEM56-204ENST00000463375 HS3ST6Q96QI5 342 aa6.1□□□□□ -1.43
TMEM56-204ENST00000463375 POTEB3A0JP26 581 aa6.09□□□□□ -1.43
TMEM56-204ENST00000463375 POTEBQ6S5H4 581 aa6.09□□□□□ -1.43
TMEM56-204ENST00000463375 C3orf67Q6ZVT6 689 aa6.08□□□□□ -1.44
TMEM56-204ENST00000463375 FAM205CA6NFA0 338 aa6.05□□□□□ -1.44
TMEM56-204ENST00000463375 L3MBTL3Q96JM7 780 aaPredicted RBP6.05□□□□□ -1.44
TMEM56-204ENST00000463375 PYGBP11216 843 aa6.04□□□□□ -1.44
TMEM56-204ENST00000463375 PCDHB8Q9UN66 801 aa6.04□□□□□ -1.44
TMEM56-204ENST00000463375 ILDR1Q86SU0 546 aaPredicted RBP6.02□□□□□ -1.45
TMEM56-204ENST00000463375 MKRN3Q13064 507 aaKnown RBP6□□□□□ -1.45
TMEM56-204ENST00000463375 HOXB3P14651 431 aaPredicted RBP5.99□□□□□ -1.45
TMEM56-204ENST00000463375 DCAF8Q5TAQ9 597 aa5.99□□□□□ -1.45
TMEM56-204ENST00000463375 ZNF467Q7Z7K2 595 aaPredicted RBP5.99□□□□□ -1.45
TMEM56-204ENST00000463375 GOLGA2Q08379 1002 aa5.98□□□□□ -1.45
TMEM56-204ENST00000463375 RNF166Q96A37 237 aaPredicted RBP5.98□□□□□ -1.45
TMEM56-204ENST00000463375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.98□□□□□ -1.45
TMEM56-204ENST00000463375 HOXB1P14653 301 aaPredicted RBP5.97□□□□□ -1.45
TMEM56-204ENST00000463375 CHRM1P11229 460 aaPredicted RBP5.94□□□□□ -1.46
TMEM56-204ENST00000463375 PSEN1P49768 467 aa5.92□□□□□ -1.46
TMEM56-204ENST00000463375 GSE1Q14687 1217 aa5.92□□□□□ -1.46
TMEM56-204ENST00000463375 DOK7Q18PE1 504 aa5.92□□□□□ -1.46
TMEM56-204ENST00000463375 MYT1LQ9UL68 1186 aa5.92□□□□□ -1.46
TMEM56-204ENST00000463375 BOLA1Q9Y3E2 137 aa5.92□□□□□ -1.46
TMEM56-204ENST00000463375 ERBB3P21860 1342 aa5.92□□□□□ -1.46
TMEM56-204ENST00000463375 ZNF710Q8N1W2 664 aa5.91□□□□□ -1.46
TMEM56-204ENST00000463375 PTGER2P43116 358 aa5.9□□□□□ -1.46
TMEM56-204ENST00000463375 DPY19L2Q6NUT2 758 aa5.9□□□□□ -1.46
TMEM56-204ENST00000463375 PDAP1Q13442 181 aaKnown RBP5.89□□□□□ -1.47
TMEM56-204ENST00000463375 G3V3G9 751 aa5.88□□□□□ -1.47
TMEM56-204ENST00000463375 RIMBP2O15034 1052 aa5.88□□□□□ -1.47
TMEM56-204ENST00000463375 VARS2Q5ST30 1063 aaKnown RBP5.88□□□□□ -1.47
TMEM56-204ENST00000463375 ZSWIM6Q9HCJ5 1215 aa5.87□□□□□ -1.47
TMEM56-204ENST00000463375 ZNF687Q8N1G0 1237 aa5.86□□□□□ -1.47
TMEM56-204ENST00000463375 FBXO3Q9UK99 471 aa5.85□□□□□ -1.47
TMEM56-204ENST00000463375 CABP2Q9NPB3 220 aa5.84□□□□□ -1.47
TMEM56-204ENST00000463375 FKBP8Q14318 412 aa5.83□□□□□ -1.48
TMEM56-204ENST00000463375 GPR153Q6NV75 609 aa5.81□□□□□ -1.48
TMEM56-204ENST00000463375 VASPP50552 380 aaPredicted RBP5.8□□□□□ -1.48
TMEM56-204ENST00000463375 TMEM92Q6UXU6 159 aa5.79□□□□□ -1.48
TMEM56-204ENST00000463375 KLHL34Q8N239 644 aa5.79□□□□□ -1.48
TMEM56-204ENST00000463375 MICALL2Q8IY33 904 aa5.78□□□□□ -1.48
TMEM56-204ENST00000463375 LSM11P83369 360 aaKnown RBP eCLIP5.76□□□□□ -1.49
TMEM56-204ENST00000463375 ANKRD13DQ6ZTN6 518 aa5.75□□□□□ -1.49
TMEM56-204ENST00000463375 ZNF316A6NFI3 1004 aaPredicted RBP5.74□□□□□ -1.49
TMEM56-204ENST00000463375 PLA2G2EQ9NZK7 142 aa5.74□□□□□ -1.49
TMEM56-204ENST00000463375 PBX2P40425 430 aa5.73□□□□□ -1.49
TMEM56-204ENST00000463375 EFCAB3Q8N7B9 438 aa5.73□□□□□ -1.49
TMEM56-204ENST00000463375 ARSIQ5FYB1 569 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms