RNA–Protein interactions for RNA: ENST00000461623.1

ABCA9-204, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5

Gene ABCA9, Length 2,172 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-204ENST00000461623 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
ABCA9-204ENST00000461623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
ABCA9-204ENST00000461623 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.42
ABCA9-204ENST00000461623 HRCP23327 699 aa12.46□□□□□ -0.42
ABCA9-204ENST00000461623 MIER1Q8N108 512 aa12.44□□□□□ -0.42
ABCA9-204ENST00000461623 POLA2Q14181 598 aa12.42□□□□□ -0.42
ABCA9-204ENST00000461623 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
ABCA9-204ENST00000461623 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
ABCA9-204ENST00000461623 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
ABCA9-204ENST00000461623 P3H3Q8IVL6 736 aa12.4□□□□□ -0.42
ABCA9-204ENST00000461623 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
ABCA9-204ENST00000461623 KCNV2Q8TDN2 545 aa12.33□□□□□ -0.44
ABCA9-204ENST00000461623 ZC3H15Q8WU90 426 aaKnown RBP12.29□□□□□ -0.44
ABCA9-204ENST00000461623 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
ABCA9-204ENST00000461623 STK25O00506 426 aa12.25□□□□□ -0.45
ABCA9-204ENST00000461623 RIOK3O14730 519 aaKnown RBP12.25□□□□□ -0.45
ABCA9-204ENST00000461623 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
ABCA9-204ENST00000461623 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
ABCA9-204ENST00000461623 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
ABCA9-204ENST00000461623 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
ABCA9-204ENST00000461623 RSPH6AQ9H0K4 717 aa12.21□□□□□ -0.45
ABCA9-204ENST00000461623 ARID3AQ99856 593 aa12.17□□□□□ -0.46
ABCA9-204ENST00000461623 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
ABCA9-204ENST00000461623 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
ABCA9-204ENST00000461623 GSE1Q14687 1217 aa12.15□□□□□ -0.46
ABCA9-204ENST00000461623 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.47
ABCA9-204ENST00000461623 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
ABCA9-204ENST00000461623 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
ABCA9-204ENST00000461623 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
ABCA9-204ENST00000461623 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
ABCA9-204ENST00000461623 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
ABCA9-204ENST00000461623 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
ABCA9-204ENST00000461623 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
ABCA9-204ENST00000461623 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
ABCA9-204ENST00000461623 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
ABCA9-204ENST00000461623 ZMYND10O75800 440 aa12.06□□□□□ -0.48
ABCA9-204ENST00000461623 NUBP1P53384 320 aa12.04□□□□□ -0.48
ABCA9-204ENST00000461623 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
ABCA9-204ENST00000461623 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
ABCA9-204ENST00000461623 ZFP91Q96JP5 570 aaPredicted RBP12.03□□□□□ -0.48
ABCA9-204ENST00000461623 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
ABCA9-204ENST00000461623 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
ABCA9-204ENST00000461623 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
ABCA9-204ENST00000461623 SEMA3EO15041 775 aa12.01□□□□□ -0.49
ABCA9-204ENST00000461623 CAPN15O75808 1086 aa12.01□□□□□ -0.49
ABCA9-204ENST00000461623 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
ABCA9-204ENST00000461623 GPBP1L1Q9HC44 474 aaPredicted RBP12.01□□□□□ -0.49
ABCA9-204ENST00000461623 TESPA1A2RU30 521 aaPredicted RBP12.01□□□□□ -0.49
ABCA9-204ENST00000461623 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
ABCA9-204ENST00000461623 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
ABCA9-204ENST00000461623 IL27Q8NEV9 243 aa11.99□□□□□ -0.49
ABCA9-204ENST00000461623 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
ABCA9-204ENST00000461623 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
ABCA9-204ENST00000461623 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
ABCA9-204ENST00000461623 ABCB7O75027 752 aa11.97□□□□□ -0.49
ABCA9-204ENST00000461623 NECTIN2Q92692 538 aa11.97□□□□□ -0.49
ABCA9-204ENST00000461623 PDIA4P13667 645 aaKnown RBP11.96□□□□□ -0.5
ABCA9-204ENST00000461623 ABCC9O60706 1549 aa11.95□□□□□ -0.5
ABCA9-204ENST00000461623 APBB1O00213 710 aa11.92□□□□□ -0.5
ABCA9-204ENST00000461623 BARGINQ6ZT62 677 aa11.92□□□□□ -0.5
ABCA9-204ENST00000461623 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
ABCA9-204ENST00000461623 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
ABCA9-204ENST00000461623 NACADO15069 1562 aa11.88□□□□□ -0.51
ABCA9-204ENST00000461623 KDM4CQ9H3R0 1056 aa11.88□□□□□ -0.51
ABCA9-204ENST00000461623 E2F4Q16254 413 aa11.86□□□□□ -0.51
ABCA9-204ENST00000461623 AK7Q96M32 723 aa11.85□□□□□ -0.51
ABCA9-204ENST00000461623 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
ABCA9-204ENST00000461623 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
ABCA9-204ENST00000461623 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
ABCA9-204ENST00000461623 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
ABCA9-204ENST00000461623 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
ABCA9-204ENST00000461623 PYGBP11216 843 aa11.73□□□□□ -0.53
ABCA9-204ENST00000461623 PDE4DQ08499 809 aa11.73□□□□□ -0.53
ABCA9-204ENST00000461623 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
ABCA9-204ENST00000461623 KCTD17Q8N5Z5 321 aa11.72□□□□□ -0.53
ABCA9-204ENST00000461623 TRIM66O15016 1216 aa11.72□□□□□ -0.53
ABCA9-204ENST00000461623 RASEFQ8IZ41 740 aa11.71□□□□□ -0.54
ABCA9-204ENST00000461623 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.54
ABCA9-204ENST00000461623 FAM117AQ9C073 453 aa11.7□□□□□ -0.54
ABCA9-204ENST00000461623 FLIIQ13045 1269 aa11.68□□□□□ -0.54
ABCA9-204ENST00000461623 MFRPQ9BY79 579 aa11.68□□□□□ -0.54
ABCA9-204ENST00000461623 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
ABCA9-204ENST00000461623 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
ABCA9-204ENST00000461623 RB1CC1Q8TDY2 1594 aa11.66□□□□□ -0.54
ABCA9-204ENST00000461623 GPIHBP1Q8IV16 184 aa11.65□□□□□ -0.54
ABCA9-204ENST00000461623 ONECUT3O60422 494 aaPredicted RBP11.65□□□□□ -0.54
ABCA9-204ENST00000461623 PPP1R37O75864 691 aa11.65□□□□□ -0.54
ABCA9-204ENST00000461623 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
ABCA9-204ENST00000461623 RAD21O60216 631 aa11.64□□□□□ -0.55
ABCA9-204ENST00000461623 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
ABCA9-204ENST00000461623 TRAK2O60296 914 aa11.63□□□□□ -0.55
ABCA9-204ENST00000461623 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
ABCA9-204ENST00000461623 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
ABCA9-204ENST00000461623 RGS22Q8NE09 1264 aa11.62□□□□□ -0.55
ABCA9-204ENST00000461623 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
ABCA9-204ENST00000461623 A6NJR5 290 aa11.61□□□□□ -0.55
ABCA9-204ENST00000461623 IGSF3O75054 1194 aa11.61□□□□□ -0.55
ABCA9-204ENST00000461623 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
ABCA9-204ENST00000461623 NCKAP5LQ9HCH0 1330 aa11.59□□□□□ -0.55
ABCA9-204ENST00000461623 MLLT3P42568 568 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms