RNA–Protein interactions for RNA: ENST00000461579.1

REG1A-202, Transcript of regenerating family member 1 alpha, humanhuman

TSL 1 (best)

Gene REG1A, Length 565 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REG1A-202ENST00000461579 GTF3C3Q9Y5Q9 886 aa7.22□□□□□ -1.25
REG1A-202ENST00000461579 CHRDL2Q6WN34 429 aa7.2□□□□□ -1.26
REG1A-202ENST00000461579 PLCD3Q8N3E9 789 aa7.2□□□□□ -1.26
REG1A-202ENST00000461579 MIER1Q8N108 512 aa7.19□□□□□ -1.26
REG1A-202ENST00000461579 FXR2P51116 673 aaKnown RBP eCLIP7.18□□□□□ -1.26
REG1A-202ENST00000461579 IFNLR1Q8IU57 520 aaPredicted RBP7.16□□□□□ -1.26
REG1A-202ENST00000461579 CREBZFQ9NS37 354 aa7.16□□□□□ -1.26
REG1A-202ENST00000461579 C14orf37Q86TY3 774 aa7.14□□□□□ -1.27
REG1A-202ENST00000461579 RB1CC1Q8TDY2 1594 aa7.13□□□□□ -1.27
REG1A-202ENST00000461579 SPOCK2Q92563 424 aa7.12□□□□□ -1.27
REG1A-202ENST00000461579 NPM1P06748 294 aaKnown RBP eCLIP7.11□□□□□ -1.27
REG1A-202ENST00000461579 PLCB2Q00722 1185 aa7.11□□□□□ -1.27
REG1A-202ENST00000461579 PIP4P2Q8N4L2 257 aa7.11□□□□□ -1.27
REG1A-202ENST00000461579 MNX1P50219 401 aaPredicted RBP7.1□□□□□ -1.27
REG1A-202ENST00000461579 PRKAR2AP13861 404 aaKnown RBP7.09□□□□□ -1.27
REG1A-202ENST00000461579 HAP1P54257 671 aaPredicted RBP7.09□□□□□ -1.27
REG1A-202ENST00000461579 FARP1Q9Y4F1 1045 aaPredicted RBP7.07□□□□□ -1.28
REG1A-202ENST00000461579 NACADO15069 1562 aa7.06□□□□□ -1.28
REG1A-202ENST00000461579 TMEM132AQ24JP5 1023 aa7.04□□□□□ -1.28
REG1A-202ENST00000461579 CHADLQ6NUI6 762 aa7.04□□□□□ -1.28
REG1A-202ENST00000461579 CDK11AQ9UQ88 783 aaPredicted RBP7.04□□□□□ -1.28
REG1A-202ENST00000461579 NUBP1P53384 320 aa7.03□□□□□ -1.28
REG1A-202ENST00000461579 TRIM41Q8WV44 630 aa7.03□□□□□ -1.28
REG1A-202ENST00000461579 PDIA4P13667 645 aaKnown RBP7.02□□□□□ -1.29
REG1A-202ENST00000461579 GSE1Q14687 1217 aa7.02□□□□□ -1.29
REG1A-202ENST00000461579 UNC13AQ9UPW8 1703 aa7.01□□□□□ -1.29
REG1A-202ENST00000461579 BICRAQ9NZM4 1560 aa7.01□□□□□ -1.29
REG1A-202ENST00000461579 NEFLP07196 543 aa7.01□□□□□ -1.29
REG1A-202ENST00000461579 FAM9AQ8IZU1 332 aaPredicted RBP7.01□□□□□ -1.29
REG1A-202ENST00000461579 UBE2Q2Q8WVN8 375 aa7.01□□□□□ -1.29
REG1A-202ENST00000461579 FAM212AQ96EL1 285 aa7.01□□□□□ -1.29
REG1A-202ENST00000461579 HMGB1P09429 215 aaKnown RBP6.98□□□□□ -1.29
REG1A-202ENST00000461579 CDK11BP21127 795 aaKnown RBP6.98□□□□□ -1.29
REG1A-202ENST00000461579 PAK3O75914 559 aaPredicted RBP6.96□□□□□ -1.3
REG1A-202ENST00000461579 PKD2Q13563 968 aa6.95□□□□□ -1.3
REG1A-202ENST00000461579 RASEFQ8IZ41 740 aa6.95□□□□□ -1.3
REG1A-202ENST00000461579 MYO15BQ96JP2 1530 aa6.95□□□□□ -1.3
REG1A-202ENST00000461579 CHRM1P11229 460 aaPredicted RBP6.94□□□□□ -1.3
REG1A-202ENST00000461579 VSIG10Q8N0Z9 540 aa6.94□□□□□ -1.3
REG1A-202ENST00000461579 C19orf67A6NJJ6 358 aa6.93□□□□□ -1.3
REG1A-202ENST00000461579 DCAF8Q5TAQ9 597 aa6.93□□□□□ -1.3
REG1A-202ENST00000461579 CIZ1Q9ULV3 898 aaPredicted RBP6.93□□□□□ -1.3
REG1A-202ENST00000461579 CENPBP07199 599 aaPredicted RBP6.92□□□□□ -1.3
REG1A-202ENST00000461579 CD44P16070 742 aaKnown RBP6.91□□□□□ -1.3
REG1A-202ENST00000461579 PDE4CQ08493 712 aa6.91□□□□□ -1.3
REG1A-202ENST00000461579 POTEHQ6S545 545 aa6.91□□□□□ -1.3
REG1A-202ENST00000461579 CLCN6P51797 869 aa6.9□□□□□ -1.3
REG1A-202ENST00000461579 TAF7LQ5H9L4 462 aa6.9□□□□□ -1.3
REG1A-202ENST00000461579 CCDC61Q9Y6R9 512 aa6.9□□□□□ -1.3
REG1A-202ENST00000461579 SHROOM4Q9ULL8 1493 aa6.9□□□□□ -1.31
REG1A-202ENST00000461579 ECM2O94769 699 aaPredicted RBP6.89□□□□□ -1.31
REG1A-202ENST00000461579 TRIM26Q12899 539 aaPredicted RBP6.89□□□□□ -1.31
REG1A-202ENST00000461579 CECR2Q9BXF3 1484 aa6.89□□□□□ -1.31
REG1A-202ENST00000461579 CC2D2AQ9P2K1 1620 aa6.88□□□□□ -1.31
REG1A-202ENST00000461579 BRD2P25440 801 aaKnown RBP6.88□□□□□ -1.31
REG1A-202ENST00000461579 SGIP1Q9BQI5 828 aa6.88□□□□□ -1.31
REG1A-202ENST00000461579 TSPYL2Q9H2G4 693 aaPredicted RBP6.88□□□□□ -1.31
REG1A-202ENST00000461579 HSP90B1P14625 803 aaKnown RBP6.87□□□□□ -1.31
REG1A-202ENST00000461579 ZNF579Q8NAF0 562 aaKnown RBP6.87□□□□□ -1.31
REG1A-202ENST00000461579 ZRANB1Q9UGI0 708 aa6.86□□□□□ -1.31
REG1A-202ENST00000461579 CHMP4AQ9BY43 222 aa6.85□□□□□ -1.31
REG1A-202ENST00000461579 HAX1O00165 279 aa6.84□□□□□ -1.31
REG1A-202ENST00000461579 ZNF467Q7Z7K2 595 aaPredicted RBP6.84□□□□□ -1.31
REG1A-202ENST00000461579 PKNOX2Q96KN3 472 aa6.83□□□□□ -1.32
REG1A-202ENST00000461579 SUPT5HO00267 1087 aaKnown RBP6.82□□□□□ -1.32
REG1A-202ENST00000461579 RIOK3O14730 519 aaKnown RBP6.82□□□□□ -1.32
REG1A-202ENST00000461579 KIF12Q96FN5 646 aa6.82□□□□□ -1.32
REG1A-202ENST00000461579 PYGBP11216 843 aa6.81□□□□□ -1.32
REG1A-202ENST00000461579 ZNF326Q5BKZ1 582 aaKnown RBP6.81□□□□□ -1.32
REG1A-202ENST00000461579 LOC105371045A0A1W2PR82 267 aa6.8□□□□□ -1.32
REG1A-202ENST00000461579 RGL2O15211 777 aa6.8□□□□□ -1.32
REG1A-202ENST00000461579 EIF4G1Q04637 1599 aaKnown RBP6.8□□□□□ -1.32
REG1A-202ENST00000461579 VGFO15240 615 aaPredicted RBP6.79□□□□□ -1.32
REG1A-202ENST00000461579 RNF25Q96BH1 459 aaPredicted RBP6.78□□□□□ -1.32
REG1A-202ENST00000461579 PCDHB13Q9Y5F0 798 aa6.78□□□□□ -1.32
REG1A-202ENST00000461579 MAP3K13O43283 966 aa6.77□□□□□ -1.33
REG1A-202ENST00000461579 HRCP23327 699 aa6.76□□□□□ -1.33
REG1A-202ENST00000461579 PDAP1Q13442 181 aaKnown RBP6.76□□□□□ -1.33
REG1A-202ENST00000461579 PHF12Q96QT6 1004 aa6.76□□□□□ -1.33
REG1A-202ENST00000461579 CCDC9Q9Y3X0 531 aaKnown RBP6.76□□□□□ -1.33
REG1A-202ENST00000461579 UBTFP17480 764 aaKnown RBP6.75□□□□□ -1.33
REG1A-202ENST00000461579 IFNL1Q8IU54 200 aa6.74□□□□□ -1.33
REG1A-202ENST00000461579 HS6ST3Q8IZP7 471 aa6.74□□□□□ -1.33
REG1A-202ENST00000461579 BCCIPQ9P287 314 aaKnown RBP eCLIP6.74□□□□□ -1.33
REG1A-202ENST00000461579 CUX2O14529 1486 aa6.73□□□□□ -1.33
REG1A-202ENST00000461579 EVX2Q03828 476 aa6.73□□□□□ -1.33
REG1A-202ENST00000461579 DCAF1Q9Y4B6 1507 aa6.72□□□□□ -1.33
REG1A-202ENST00000461579 MS4A3Q96HJ5 214 aa6.72□□□□□ -1.33
REG1A-202ENST00000461579 TIE1P35590 1138 aa6.71□□□□□ -1.34
REG1A-202ENST00000461579 PCDHB8Q9UN66 801 aa6.71□□□□□ -1.34
REG1A-202ENST00000461579 PSEN1P49768 467 aa6.7□□□□□ -1.34
REG1A-202ENST00000461579 SP7Q8TDD2 431 aaPredicted RBP6.7□□□□□ -1.34
REG1A-202ENST00000461579 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.69□□□□□ -1.34
REG1A-202ENST00000461579 FGD1P98174 961 aa6.69□□□□□ -1.34
REG1A-202ENST00000461579 DHX37Q8IY37 1157 aaKnown RBP6.69□□□□□ -1.34
REG1A-202ENST00000461579 BBXQ8WY36 941 aaPredicted RBP6.69□□□□□ -1.34
REG1A-202ENST00000461579 ZFP91Q96JP5 570 aaPredicted RBP6.69□□□□□ -1.34
REG1A-202ENST00000461579 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
REG1A-202ENST00000461579 STK25O00506 426 aa6.68□□□□□ -1.34
REG1A-202ENST00000461579 GABBR2O75899 941 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms